RNA–Protein interactions for RNA: ENST00000466471.1

SORT1-202, Transcript of sortilin 1, humanhuman

TSL 2

Gene SORT1, Length 521 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-202ENST00000466471 C7orf72A4D263 438 aa3.72□□□□□ -1.81
SORT1-202ENST00000466471 CTAGE9A4FU28 777 aa3.72□□□□□ -1.81
SORT1-202ENST00000466471 C5orf60A6NFR6 353 aa3.72□□□□□ -1.81
SORT1-202ENST00000466471 EPOPA6NHQ4 379 aa3.72□□□□□ -1.81
SORT1-202ENST00000466471 AKR1B15C9JRZ8 316 aaPredicted RBP3.72□□□□□ -1.81
SORT1-202ENST00000466471 TAF4O00268 1085 aa3.72□□□□□ -1.81
SORT1-202ENST00000466471 KRIT1O00522 736 aa3.72□□□□□ -1.81
SORT1-202ENST00000466471 EBAG9O00559 213 aa3.72□□□□□ -1.81
SORT1-202ENST00000466471 DDX3XO00571 662 aaKnown RBP eCLIP3.72□□□□□ -1.81
SORT1-202ENST00000466471 TIMM44O43615 452 aa3.72□□□□□ -1.81
SORT1-202ENST00000466471 PQBP1O60828 265 aaKnown RBP3.72□□□□□ -1.81
SORT1-202ENST00000466471 DGKIO75912 1065 aa3.72□□□□□ -1.81
SORT1-202ENST00000466471 UFL1O94874 794 aa3.72□□□□□ -1.81
SORT1-202ENST00000466471 UBXN7O94888 489 aa3.72□□□□□ -1.81
SORT1-202ENST00000466471 PAPLNO95428 1278 aa3.72□□□□□ -1.81
SORT1-202ENST00000466471 CNOT4O95628 575 aaKnown RBP3.72□□□□□ -1.81
SORT1-202ENST00000466471 PAEPP09466 180 aa3.72□□□□□ -1.81
SORT1-202ENST00000466471 GSTM1P09488 218 aa3.72□□□□□ -1.81
SORT1-202ENST00000466471 CLTBP09497 229 aa3.72□□□□□ -1.81
SORT1-202ENST00000466471 ATP1A3P13637 1013 aa3.72□□□□□ -1.81
SORT1-202ENST00000466471 PFKFB1P16118 471 aa3.72□□□□□ -1.81
SORT1-202ENST00000466471 CALRP27797 417 aaKnown RBP3.72□□□□□ -1.81
SORT1-202ENST00000466471 PEX2P28328 305 aa3.72□□□□□ -1.81
SORT1-202ENST00000466471 CCND3P30281 292 aaPredicted RBP3.72□□□□□ -1.81
SORT1-202ENST00000466471 AVPR2P30518 371 aa3.72□□□□□ -1.81
SORT1-202ENST00000466471 HOXA7P31268 230 aaPredicted RBP3.72□□□□□ -1.81
SORT1-202ENST00000466471 SYKP43405 635 aa3.72□□□□□ -1.81
SORT1-202ENST00000466471 HERVK_113P62684 666 aa3.72□□□□□ -1.81
SORT1-202ENST00000466471 IRX1P78414 480 aaPredicted RBP3.72□□□□□ -1.81
SORT1-202ENST00000466471 CYP27A1Q02318 531 aa3.72□□□□□ -1.81
SORT1-202ENST00000466471 TNK2Q07912 1038 aa3.72□□□□□ -1.81
SORT1-202ENST00000466471 BNIP3Q12983 259 aa3.72□□□□□ -1.81
SORT1-202ENST00000466471 GRIK3Q13003 919 aa3.72□□□□□ -1.81
SORT1-202ENST00000466471 RIPK1Q13546 671 aa3.72□□□□□ -1.81
SORT1-202ENST00000466471 NEDD9Q14511 834 aa3.72□□□□□ -1.81
SORT1-202ENST00000466471 SLMAPQ14BN4 828 aa3.72□□□□□ -1.81
SORT1-202ENST00000466471 MEA1Q16626 185 aa3.72□□□□□ -1.81
SORT1-202ENST00000466471 IFI16Q16666 785 aaKnown RBP3.72□□□□□ -1.81
SORT1-202ENST00000466471 UGT8Q16880 541 aa3.72□□□□□ -1.81
SORT1-202ENST00000466471 MUM1Q2TAK8 710 aa3.72□□□□□ -1.81
SORT1-202ENST00000466471 CYP27C1Q4G0S4 372 aa3.72□□□□□ -1.81
SORT1-202ENST00000466471 HSF5Q4G112 596 aaPredicted RBP3.72□□□□□ -1.81
SORT1-202ENST00000466471 GLE1Q53GS7 698 aaKnown RBP3.72□□□□□ -1.81
SORT1-202ENST00000466471 LACTB2Q53H82 288 aaPredicted RBP3.72□□□□□ -1.81
SORT1-202ENST00000466471 CCDC178Q5BJE1 867 aa3.72□□□□□ -1.81
SORT1-202ENST00000466471 EMC4Q5J8M3 183 aa3.72□□□□□ -1.81
SORT1-202ENST00000466471 EPHA10Q5JZY3 1008 aa3.72□□□□□ -1.81
SORT1-202ENST00000466471 INTS11Q5TA45 600 aaKnown RBP3.72□□□□□ -1.81
SORT1-202ENST00000466471 RNF220Q5VTB9 566 aa3.72□□□□□ -1.81
SORT1-202ENST00000466471 SPATA1Q5VX52 437 aa3.72□□□□□ -1.81
SORT1-202ENST00000466471 HLA-DQA1Q5Y7H0 255 aa3.72□□□□□ -1.81
SORT1-202ENST00000466471 PSRC1Q6PGN9 363 aaPredicted RBP3.72□□□□□ -1.81
SORT1-202ENST00000466471 SHC4Q6S5L8 630 aa3.72□□□□□ -1.81
SORT1-202ENST00000466471 CRELD2Q6UXH1 353 aaPredicted RBP3.72□□□□□ -1.81
SORT1-202ENST00000466471 PRR23BQ6ZRT6 265 aa3.72□□□□□ -1.81
SORT1-202ENST00000466471 FAM214BQ7L5A3 538 aa3.72□□□□□ -1.81
SORT1-202ENST00000466471 ZNF589Q86UQ0 364 aaPredicted RBP3.72□□□□□ -1.81
SORT1-202ENST00000466471 OSTM1Q86WC4 334 aa3.72□□□□□ -1.81
SORT1-202ENST00000466471 CNGA4Q8IV77 575 aa3.72□□□□□ -1.81
SORT1-202ENST00000466471 TOP6BLQ8N6T0 577 aa3.72□□□□□ -1.81
SORT1-202ENST00000466471 KBTBD3Q8NAB2 608 aa3.72□□□□□ -1.81
SORT1-202ENST00000466471 NAXEQ8NCW5 288 aa3.72□□□□□ -1.81
SORT1-202ENST00000466471 CFAP61Q8NHU2 1237 aa3.72□□□□□ -1.81
SORT1-202ENST00000466471 PHOSPHO1Q8TCT1 267 aa3.72□□□□□ -1.81
SORT1-202ENST00000466471 PARD3BQ8TEW8 1205 aa3.72□□□□□ -1.81
SORT1-202ENST00000466471 AENQ8WTP8 325 aaKnown RBP3.72□□□□□ -1.81
SORT1-202ENST00000466471 BCL7CQ8WUZ0 217 aaPredicted RBP3.72□□□□□ -1.81
SORT1-202ENST00000466471 LRTOMTQ8WZ04 291 aa3.72□□□□□ -1.81
SORT1-202ENST00000466471 LPAR1Q92633 364 aa3.72□□□□□ -1.81
SORT1-202ENST00000466471 CELF1Q92879 486 aaKnown RBP3.72□□□□□ -1.81
SORT1-202ENST00000466471 PHKBQ93100 1093 aa3.72□□□□□ -1.81
SORT1-202ENST00000466471 SKA1Q96BD8 255 aa3.72□□□□□ -1.81
SORT1-202ENST00000466471 ARL8AQ96BM9 186 aa3.72□□□□□ -1.81
SORT1-202ENST00000466471 IQCDQ96DY2 449 aa3.72□□□□□ -1.81
SORT1-202ENST00000466471 CDK5RAP3Q96JB5 506 aa3.72□□□□□ -1.81
SORT1-202ENST00000466471 CABS1Q96KC9 395 aa3.72□□□□□ -1.81
SORT1-202ENST00000466471 ANKRD27Q96NW4 1050 aa3.72□□□□□ -1.81
SORT1-202ENST00000466471 MED15Q96RN5 788 aa3.72□□□□□ -1.81
SORT1-202ENST00000466471 NAPGQ99747 312 aaPredicted RBP3.72□□□□□ -1.81
SORT1-202ENST00000466471 MXD3Q9BW11 206 aa3.72□□□□□ -1.81
SORT1-202ENST00000466471 DUSP15Q9H1R2 295 aaPredicted RBP3.72□□□□□ -1.81
SORT1-202ENST00000466471 MYLK2Q9H1R3 596 aa3.72□□□□□ -1.81
SORT1-202ENST00000466471 HAUS4Q9H6D7 363 aa3.72□□□□□ -1.81
SORT1-202ENST00000466471 MRPL44Q9H9J2 332 aaKnown RBP3.72□□□□□ -1.81
SORT1-202ENST00000466471 SP110Q9HB58 689 aa3.72□□□□□ -1.81
SORT1-202ENST00000466471 DCP1AQ9NPI6 582 aaPredicted RBP3.72□□□□□ -1.81
SORT1-202ENST00000466471 KMT5AQ9NQR1 393 aa3.72□□□□□ -1.81
SORT1-202ENST00000466471 BATF3Q9NR55 127 aa3.72□□□□□ -1.81
SORT1-202ENST00000466471 C1GALT1Q9NS00 363 aa3.72□□□□□ -1.81
SORT1-202ENST00000466471 C9orf78Q9NZ63 289 aaPredicted RBP3.72□□□□□ -1.81
SORT1-202ENST00000466471 VPS18Q9P253 973 aa3.72□□□□□ -1.81
SORT1-202ENST00000466471 RNF14Q9UBS8 474 aa3.72□□□□□ -1.81
SORT1-202ENST00000466471 DBF4Q9UBU7 674 aaPredicted RBP3.72□□□□□ -1.81
SORT1-202ENST00000466471 LIMA1Q9UHB6 759 aaKnown RBP3.72□□□□□ -1.81
SORT1-202ENST00000466471 HOOK1Q9UJC3 728 aaKnown RBP3.72□□□□□ -1.81
SORT1-202ENST00000466471 TCFL5Q9UL49 500 aa3.72□□□□□ -1.81
SORT1-202ENST00000466471 SUFUQ9UMX1 484 aa3.72□□□□□ -1.81
SORT1-202ENST00000466471 SLC5A6Q9Y289 635 aa3.72□□□□□ -1.81
SORT1-202ENST00000466471 SLC45A1Q9Y2W3 748 aa3.72□□□□□ -1.81
SORT1-202ENST00000466471 CFAP20Q9Y6A4 193 aaKnown RBP3.72□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms