RNA–Protein interactions for RNA: ENST00000465525.6

PTPRU-206, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 2

Gene PTPRU, Length 1,650 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-206ENST00000465525 YIPF1Q9Y548 306 aa18.1■□□□□ 0.49
PTPRU-206ENST00000465525 TCRBV5S1A1TA0A578 114 aa18.09■□□□□ 0.49
PTPRU-206ENST00000465525 TMEM110-MUSTN1A8MSY1 372 aa18.09■□□□□ 0.49
PTPRU-206ENST00000465525 TNFRSF10BO14763 440 aa18.09■□□□□ 0.49
PTPRU-206ENST00000465525 CLASP2O75122 1294 aaKnown RBP18.09■□□□□ 0.49
PTPRU-206ENST00000465525 ELF1P32519 619 aa18.09■□□□□ 0.49
PTPRU-206ENST00000465525 USP46P62068 366 aa18.09■□□□□ 0.49
PTPRU-206ENST00000465525 RPL7AP62424 266 aaKnown RBP18.09■□□□□ 0.49
PTPRU-206ENST00000465525 ZNF268Q14587 947 aaPredicted RBP18.09■□□□□ 0.49
PTPRU-206ENST00000465525 RAB41Q5JT25 222 aa18.09■□□□□ 0.49
PTPRU-206ENST00000465525 PLEKHA7Q6IQ23 1121 aa18.09■□□□□ 0.49
PTPRU-206ENST00000465525 LILRA6Q6PI73 481 aa18.09■□□□□ 0.49
PTPRU-206ENST00000465525 OLFML1Q6UWY5 402 aa18.09■□□□□ 0.49
PTPRU-206ENST00000465525 JOSD2Q8TAC2 188 aa18.09■□□□□ 0.49
PTPRU-206ENST00000465525 ZNF564Q8TBZ8 553 aaPredicted RBP18.09■□□□□ 0.49
PTPRU-206ENST00000465525 MCRS1Q96EZ8 462 aa18.09■□□□□ 0.49
PTPRU-206ENST00000465525 MCEEQ96PE7 176 aa18.09■□□□□ 0.49
PTPRU-206ENST00000465525 SELENOOQ9BVL4 669 aa18.09■□□□□ 0.49
PTPRU-206ENST00000465525 UBXN6Q9BZV1 441 aa18.09■□□□□ 0.49
PTPRU-206ENST00000465525 NSUN3Q9H649 340 aaKnown RBP18.09■□□□□ 0.49
PTPRU-206ENST00000465525 PARVAQ9NVD7 372 aa18.09■□□□□ 0.49
PTPRU-206ENST00000465525 CLCN4P51793 760 aa18.09■□□□□ 0.49
PTPRU-206ENST00000465525 RPL10AP62906 217 aaKnown RBP18.09■□□□□ 0.49
PTPRU-206ENST00000465525 ZNF662Q6ZS27 426 aa18.09■□□□□ 0.49
PTPRU-206ENST00000465525 EMC1Q8N766 993 aa18.09■□□□□ 0.49
PTPRU-206ENST00000465525 C3orf20Q8ND61 904 aa18.09■□□□□ 0.49
PTPRU-206ENST00000465525 SLC7A14Q8TBB6 771 aa18.09■□□□□ 0.49
PTPRU-206ENST00000465525 CDCA3Q99618 268 aaPredicted RBP18.09■□□□□ 0.49
PTPRU-206ENST00000465525 GOLPH3Q9H4A6 298 aa18.09■□□□□ 0.49
PTPRU-206ENST00000465525 CYLDQ9NQC7 956 aa18.09■□□□□ 0.49
PTPRU-206ENST00000465525 HSFX1Q9UBD0 423 aa18.09■□□□□ 0.49
PTPRU-206ENST00000465525 INSL5Q9Y5Q6 135 aa18.09■□□□□ 0.49
PTPRU-206ENST00000465525 CAPN6Q9Y6Q1 641 aa18.09■□□□□ 0.49
PTPRU-206ENST00000465525 CDH23Q9H251 3354 aa18.08■□□□□ 0.49
PTPRU-206ENST00000465525 GLUD1P00367 558 aa18.08■□□□□ 0.48
PTPRU-206ENST00000465525 KRT3P12035 628 aa18.08■□□□□ 0.48
PTPRU-206ENST00000465525 EPCAMP16422 314 aa18.08■□□□□ 0.48
PTPRU-206ENST00000465525 TUFMP49411 452 aaKnown RBP18.08■□□□□ 0.48
PTPRU-206ENST00000465525 SNX16P57768 344 aa18.08■□□□□ 0.48
PTPRU-206ENST00000465525 SLC6A3Q01959 620 aa18.08■□□□□ 0.48
PTPRU-206ENST00000465525 TWF1Q12792 350 aa18.08■□□□□ 0.48
PTPRU-206ENST00000465525 DUSP6Q16828 381 aa18.08■□□□□ 0.48
PTPRU-206ENST00000465525 HFE2Q6ZVN8 426 aa18.08■□□□□ 0.48
PTPRU-206ENST00000465525 TCEAL8Q8IYN2 117 aa18.08■□□□□ 0.48
PTPRU-206ENST00000465525 NUP93Q8N1F7 819 aa18.08■□□□□ 0.48
PTPRU-206ENST00000465525 KREMEN2Q8NCW0 462 aa18.08■□□□□ 0.48
PTPRU-206ENST00000465525 C16orf45Q96MC5 204 aaPredicted RBP18.08■□□□□ 0.48
PTPRU-206ENST00000465525 GAS2L1Q99501 681 aaPredicted RBP18.08■□□□□ 0.48
PTPRU-206ENST00000465525 PNPLA8Q9NP80 782 aa18.08■□□□□ 0.48
PTPRU-206ENST00000465525 WDR35Q9P2L0 1181 aa18.08■□□□□ 0.48
PTPRU-206ENST00000465525 ANAPC7Q9UJX3 599 aa18.08■□□□□ 0.48
PTPRU-206ENST00000465525 MAGED2Q9UNF1 606 aaPredicted RBP18.08■□□□□ 0.48
PTPRU-206ENST00000465525 MTCH2Q9Y6C9 303 aa18.08■□□□□ 0.48
PTPRU-206ENST00000465525 A0A0A6YYK5 440 aaPredicted RBP18.07■□□□□ 0.48
PTPRU-206ENST00000465525 GOLGA6L9A6NEM1 432 aa18.07■□□□□ 0.48
PTPRU-206ENST00000465525 SLC38A8A6NNN8 435 aa18.07■□□□□ 0.48
PTPRU-206ENST00000465525 BTNL10A8MVZ5 291 aa18.07■□□□□ 0.48
PTPRU-206ENST00000465525 ZBED1O96006 694 aa18.07■□□□□ 0.48
PTPRU-206ENST00000465525 RFC1P35251 1148 aaPredicted RBP18.07■□□□□ 0.48
PTPRU-206ENST00000465525 NRIP1P48552 1158 aa18.07■□□□□ 0.48
PTPRU-206ENST00000465525 PGFP49763 221 aa18.07■□□□□ 0.48
PTPRU-206ENST00000465525 DAOAP59103 153 aa18.07■□□□□ 0.48
PTPRU-206ENST00000465525 MRPS5P82675 430 aaKnown RBP18.07■□□□□ 0.48
PTPRU-206ENST00000465525 RBM10P98175 930 aaKnown RBP18.07■□□□□ 0.48
PTPRU-206ENST00000465525 ADGRE1Q14246 886 aa18.07■□□□□ 0.48
PTPRU-206ENST00000465525 PPP1R15BQ5SWA1 713 aa18.07■□□□□ 0.48
PTPRU-206ENST00000465525 TRNP1Q6NT89 227 aa18.07■□□□□ 0.48
PTPRU-206ENST00000465525 DCUN1D2Q6PH85 259 aa18.07■□□□□ 0.48
PTPRU-206ENST00000465525 CPNE8Q86YQ8 564 aa18.07■□□□□ 0.48
PTPRU-206ENST00000465525 RHOT2Q8IXI1 618 aa18.07■□□□□ 0.48
PTPRU-206ENST00000465525 FEZF2Q8TBJ5 459 aa18.07■□□□□ 0.48
PTPRU-206ENST00000465525 SLC22A17Q8WUG5 538 aa18.07■□□□□ 0.48
PTPRU-206ENST00000465525 KHSRPQ92945 711 aaKnown RBP eCLIP18.07■□□□□ 0.48
PTPRU-206ENST00000465525 DPP7Q9UHL4 492 aa18.07■□□□□ 0.48
PTPRU-206ENST00000465525 FBXW11Q9UKB1 542 aa18.07■□□□□ 0.48
PTPRU-206ENST00000465525 SCINQ9Y6U3 715 aa18.07■□□□□ 0.48
PTPRU-206ENST00000465525 SIGLEC16A6NMB1 481 aa18.06■□□□□ 0.48
PTPRU-206ENST00000465525 YJEFN3A6XGL0 299 aa18.06■□□□□ 0.48
PTPRU-206ENST00000465525 E7ENQ6 273 aa18.06■□□□□ 0.48
PTPRU-206ENST00000465525 IGFBP4P22692 258 aa18.06■□□□□ 0.48
PTPRU-206ENST00000465525 ALDH1A3P47895 512 aa18.06■□□□□ 0.48
PTPRU-206ENST00000465525 GSCP56915 257 aaPredicted RBP18.06■□□□□ 0.48
PTPRU-206ENST00000465525 OGDHQ02218 1023 aa18.06■□□□□ 0.48
PTPRU-206ENST00000465525 MESDQ14696 234 aa18.06■□□□□ 0.48
PTPRU-206ENST00000465525 ZNF569Q5MCW4 686 aa18.06■□□□□ 0.48
PTPRU-206ENST00000465525 BHLHA9Q7RTU4 235 aa18.06■□□□□ 0.48
PTPRU-206ENST00000465525 TPCN2Q8NHX9 752 aa18.06■□□□□ 0.48
PTPRU-206ENST00000465525 FAM149B1Q96BN6 582 aa18.06■□□□□ 0.48
PTPRU-206ENST00000465525 SPATA17Q96L03 361 aa18.06■□□□□ 0.48
PTPRU-206ENST00000465525 PLEKHA4Q9H4M7 779 aa18.06■□□□□ 0.48
PTPRU-206ENST00000465525 MRPL47Q9HD33 250 aaKnown RBP18.06■□□□□ 0.48
PTPRU-206ENST00000465525 UVRAGQ9P2Y5 699 aa18.06■□□□□ 0.48
PTPRU-206ENST00000465525 HYOU1Q9Y4L1 999 aa18.06■□□□□ 0.48
PTPRU-206ENST00000465525 GRID2IPA4D2P6 1211 aa18.06■□□□□ 0.48
PTPRU-206ENST00000465525 TMEM191CA6NGB0 347 aa18.06■□□□□ 0.48
PTPRU-206ENST00000465525 BUB1BO60566 1050 aaPredicted RBP18.06■□□□□ 0.48
PTPRU-206ENST00000465525 PALMO75781 387 aa18.06■□□□□ 0.48
PTPRU-206ENST00000465525 FBXO21O94952 628 aa18.06■□□□□ 0.48
PTPRU-206ENST00000465525 C8AP07357 584 aa18.06■□□□□ 0.48
PTPRU-206ENST00000465525 GTF2F1P35269 517 aaKnown RBP eCLIP18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms