RNA–Protein interactions for RNA: ENST00000464053.1

GYPC-205, Transcript of glycophorin C (Gerbich blood group), humanhuman

TSL 1 (best)

Gene GYPC, Length 1,805 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPC-205ENST00000464053 SLC27A5Q9Y2P5 690 aa16.19■□□□□ 0.18
GYPC-205ENST00000464053 CCDC85CA6NKD9 419 aa16.18■□□□□ 0.18
GYPC-205ENST00000464053 YJEFN3A6XGL0 299 aa16.18■□□□□ 0.18
GYPC-205ENST00000464053 E7ENQ6 273 aa16.18■□□□□ 0.18
GYPC-205ENST00000464053 TNFRSF10BO14763 440 aa16.18■□□□□ 0.18
GYPC-205ENST00000464053 TADA3O75528 432 aa16.18■□□□□ 0.18
GYPC-205ENST00000464053 SOAT2O75908 522 aa16.18■□□□□ 0.18
GYPC-205ENST00000464053 RWDD2BP57060 319 aa16.18■□□□□ 0.18
GYPC-205ENST00000464053 DSG1Q02413 1049 aa16.18■□□□□ 0.18
GYPC-205ENST00000464053 CDO1Q16878 200 aa16.18■□□□□ 0.18
GYPC-205ENST00000464053 CCDC181Q5TID7 509 aa16.18■□□□□ 0.18
GYPC-205ENST00000464053 BHLHA9Q7RTU4 235 aa16.18■□□□□ 0.18
GYPC-205ENST00000464053 PHOSPHO2Q8TCD6 241 aa16.18■□□□□ 0.18
GYPC-205ENST00000464053 SP7Q8TDD2 431 aaPredicted RBP16.18■□□□□ 0.18
GYPC-205ENST00000464053 AUTS2Q8WXX7 1259 aa16.18■□□□□ 0.18
GYPC-205ENST00000464053 FAM149B1Q96BN6 582 aa16.18■□□□□ 0.18
GYPC-205ENST00000464053 RNPC3Q96LT9 517 aaKnown RBP16.18■□□□□ 0.18
GYPC-205ENST00000464053 CLSTN3Q9BQT9 956 aa16.18■□□□□ 0.18
GYPC-205ENST00000464053 CNPY3Q9BT09 278 aa16.18■□□□□ 0.18
GYPC-205ENST00000464053 PNPLA8Q9NP80 782 aa16.18■□□□□ 0.18
GYPC-205ENST00000464053 CNGB3Q9NQW8 809 aa16.18■□□□□ 0.18
GYPC-205ENST00000464053 BACE2Q9Y5Z0 518 aa16.18■□□□□ 0.18
GYPC-205ENST00000464053 WDR27A2RRH5 827 aa16.17■□□□□ 0.18
GYPC-205ENST00000464053 DPYSL4O14531 572 aa16.17■□□□□ 0.18
GYPC-205ENST00000464053 PSTPIP1O43586 416 aa16.17■□□□□ 0.18
GYPC-205ENST00000464053 TLL1O43897 1013 aa16.17■□□□□ 0.18
GYPC-205ENST00000464053 FBXO21O94952 628 aa16.17■□□□□ 0.18
GYPC-205ENST00000464053 ZBED1O96006 694 aa16.17■□□□□ 0.18
GYPC-205ENST00000464053 IL1R2P27930 398 aa16.17■□□□□ 0.18
GYPC-205ENST00000464053 OR1D2P34982 312 aa16.17■□□□□ 0.18
GYPC-205ENST00000464053 GLUD2P49448 558 aa16.17■□□□□ 0.18
GYPC-205ENST00000464053 SLC5A3P53794 718 aa16.17■□□□□ 0.18
GYPC-205ENST00000464053 ATP11AP98196 1134 aa16.17■□□□□ 0.18
GYPC-205ENST00000464053 ROR1Q01973 937 aa16.17■□□□□ 0.18
GYPC-205ENST00000464053 SLC25A11Q02978 314 aaKnown RBP16.17■□□□□ 0.18
GYPC-205ENST00000464053 CKAP4Q07065 602 aaKnown RBP16.17■□□□□ 0.18
GYPC-205ENST00000464053 C9orf50Q5SZB4 431 aa16.17■□□□□ 0.18
GYPC-205ENST00000464053 RASIP1Q5U651 963 aa16.17■□□□□ 0.18
GYPC-205ENST00000464053 SLC8B1Q6J4K2 584 aa16.17■□□□□ 0.18
GYPC-205ENST00000464053 ARCQ7LC44 396 aa16.17■□□□□ 0.18
GYPC-205ENST00000464053 DEFB106AQ8N104 65 aa16.17■□□□□ 0.18
GYPC-205ENST00000464053 VPS52Q8N1B4 723 aa16.17■□□□□ 0.18
GYPC-205ENST00000464053 ACTRT1Q8TDG2 376 aa16.17■□□□□ 0.18
GYPC-205ENST00000464053 UBE2Q2Q8WVN8 375 aa16.17■□□□□ 0.18
GYPC-205ENST00000464053 TSC1Q92574 1164 aa16.17■□□□□ 0.18
GYPC-205ENST00000464053 CLP1Q92989 425 aaKnown RBP16.17■□□□□ 0.18
GYPC-205ENST00000464053 AAASQ9NRG9 546 aa16.17■□□□□ 0.18
GYPC-205ENST00000464053 KLHL11Q9NVR0 708 aa16.17■□□□□ 0.18
GYPC-205ENST00000464053 ASNSD1Q9NWL6 643 aa16.17■□□□□ 0.18
GYPC-205ENST00000464053 PCDHB12Q9Y5F1 795 aa16.17■□□□□ 0.18
GYPC-205ENST00000464053 USP3Q9Y6I4 520 aa16.17■□□□□ 0.18
GYPC-205ENST00000464053 PLXNA4Q9HCM2 1894 aa16.17■□□□□ 0.18
GYPC-205ENST00000464053 UQCRHLA0A096LP55 91 aa16.17■□□□□ 0.18
GYPC-205ENST00000464053 CTAGE15A4D2H0 777 aa16.17■□□□□ 0.18
GYPC-205ENST00000464053 CTIFO43310 598 aaKnown RBP16.17■□□□□ 0.18
GYPC-205ENST00000464053 HSF2BPO75031 334 aa16.17■□□□□ 0.18
GYPC-205ENST00000464053 FGF18O76093 207 aa16.17■□□□□ 0.18
GYPC-205ENST00000464053 FYNP06241 537 aa16.17■□□□□ 0.18
GYPC-205ENST00000464053 UQCRHP07919 91 aa16.17■□□□□ 0.18
GYPC-205ENST00000464053 CTAGE8P0CG41 777 aa16.17■□□□□ 0.18
GYPC-205ENST00000464053 DNAJB2P25686 324 aa16.17■□□□□ 0.18
GYPC-205ENST00000464053 SDC4P31431 198 aa16.17■□□□□ 0.18
GYPC-205ENST00000464053 PAFAH1B1P43034 410 aa16.17■□□□□ 0.18
GYPC-205ENST00000464053 MAGEA11P43364 429 aa16.17■□□□□ 0.18
GYPC-205ENST00000464053 YWHAZP63104 245 aaKnown RBP16.17■□□□□ 0.18
GYPC-205ENST00000464053 C2orf54Q08AI8 447 aa16.17■□□□□ 0.18
GYPC-205ENST00000464053 IFRD2Q12894 506 aaPredicted RBP16.17■□□□□ 0.18
GYPC-205ENST00000464053 LLGL1Q15334 1064 aa16.17■□□□□ 0.18
GYPC-205ENST00000464053 PM20D1Q6GTS8 502 aa16.17■□□□□ 0.18
GYPC-205ENST00000464053 VSTM1Q6UX27 236 aa16.17■□□□□ 0.18
GYPC-205ENST00000464053 ZNF572Q7Z3I7 529 aaPredicted RBP16.17■□□□□ 0.18
GYPC-205ENST00000464053 CTAGE6Q86UF2 777 aa16.17■□□□□ 0.18
GYPC-205ENST00000464053 CTAGE4Q8IX94 777 aa16.17■□□□□ 0.18
GYPC-205ENST00000464053 GPR152Q8TDT2 470 aa16.17■□□□□ 0.18
GYPC-205ENST00000464053 ACSF2Q96CM8 615 aaPredicted RBP16.17■□□□□ 0.18
GYPC-205ENST00000464053 C11orf84Q9BUA3 381 aaPredicted RBP16.17■□□□□ 0.18
GYPC-205ENST00000464053 OXCT2Q9BYC2 517 aaPredicted RBP16.17■□□□□ 0.18
GYPC-205ENST00000464053 RNF14Q9UBS8 474 aa16.17■□□□□ 0.18
GYPC-205ENST00000464053 PCSK1NQ9UHG2 260 aa16.17■□□□□ 0.18
GYPC-205ENST00000464053 FGGP02679 453 aa16.16■□□□□ 0.18
GYPC-205ENST00000464053 MIPP30301 263 aa16.16■□□□□ 0.18
GYPC-205ENST00000464053 GTF2F1P35269 517 aaKnown RBP eCLIP16.16■□□□□ 0.181e-6■■■■□ 23.1
GYPC-205ENST00000464053 PPM1AP35813 382 aa16.16■□□□□ 0.18
GYPC-205ENST00000464053 PITX1P78337 314 aaPredicted RBP16.16■□□□□ 0.18
GYPC-205ENST00000464053 DUSP4Q13115 394 aa16.16■□□□□ 0.18
GYPC-205ENST00000464053 ACAP1Q15027 740 aa16.16■□□□□ 0.18
GYPC-205ENST00000464053 SYPL2Q5VXT5 272 aa16.16■□□□□ 0.18
GYPC-205ENST00000464053 ANKS1BQ7Z6G8 1248 aa16.16■□□□□ 0.18
GYPC-205ENST00000464053 KLHL23Q8NBE8 558 aa16.16■□□□□ 0.18
GYPC-205ENST00000464053 NOA1Q8NC60 698 aaKnown RBP16.16■□□□□ 0.18
GYPC-205ENST00000464053 SPATA4Q8NEY3 305 aa16.16■□□□□ 0.18
GYPC-205ENST00000464053 FAM172AQ8WUF8 416 aa16.16■□□□□ 0.18
GYPC-205ENST00000464053 C8orf48Q96LL4 319 aa16.16■□□□□ 0.18
GYPC-205ENST00000464053 PEBP4Q96S96 227 aa16.16■□□□□ 0.18
GYPC-205ENST00000464053 DDX23Q9BUQ8 820 aaKnown RBP16.16■□□□□ 0.18
GYPC-205ENST00000464053 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP16.16■□□□□ 0.18
GYPC-205ENST00000464053 CALCOCO1Q9P1Z2 691 aa16.16■□□□□ 0.18
GYPC-205ENST00000464053 NAALADL1Q9UQQ1 740 aa16.16■□□□□ 0.18
GYPC-205ENST00000464053 SBDSQ9Y3A5 250 aaKnown RBP eCLIP16.16■□□□□ 0.18
GYPC-205ENST00000464053 CARNS1A5YM72 827 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms