RNA–Protein interactions for RNA: ENST00000463184.1

VARS-221, Transcript of valyl-tRNA synthetase, humanhuman

TSL 2

Gene VARS, Length 619 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-221ENST00000463184 CFAP47Q6ZTR5 3102 aa21.03■□□□□ 0.96
VARS-221ENST00000463184 USP24Q9UPU5 2620 aa21.03■□□□□ 0.96
VARS-221ENST00000463184 UBE4BO95155 1302 aa21.03■□□□□ 0.96
VARS-221ENST00000463184 E2F8A0AVK6 867 aa21.02■□□□□ 0.96
VARS-221ENST00000463184 PATE3B3GLJ2 98 aa21.02■□□□□ 0.96
VARS-221ENST00000463184 CDX4O14627 284 aaPredicted RBP21.02■□□□□ 0.96
VARS-221ENST00000463184 GIPC1O14908 333 aa21.02■□□□□ 0.96
VARS-221ENST00000463184 CLIC2O15247 247 aa21.02■□□□□ 0.96
VARS-221ENST00000463184 SPTLC2O15270 562 aa21.02■□□□□ 0.96
VARS-221ENST00000463184 PPP6R2O75170 966 aa21.02■□□□□ 0.96
VARS-221ENST00000463184 CHRM1P11229 460 aaPredicted RBP21.02■□□□□ 0.96
VARS-221ENST00000463184 ADH5P11766 374 aa21.02■□□□□ 0.96
VARS-221ENST00000463184 CEACAM1P13688 526 aa21.02■□□□□ 0.96
VARS-221ENST00000463184 HNRNPLP14866 589 aaKnown RBP eCLIP21.02■□□□□ 0.96
VARS-221ENST00000463184 CSRP1P21291 193 aaKnown RBP21.02■□□□□ 0.96
VARS-221ENST00000463184 P2RY2P41231 377 aa21.02■□□□□ 0.96
VARS-221ENST00000463184 IRX4P78413 519 aa21.02■□□□□ 0.96
VARS-221ENST00000463184 IFRD2Q12894 506 aaPredicted RBP21.02■□□□□ 0.96
VARS-221ENST00000463184 BYSLQ13895 437 aaKnown RBP21.02■□□□□ 0.96
VARS-221ENST00000463184 LPCAT2Q7L5N7 544 aa21.02■□□□□ 0.96
VARS-221ENST00000463184 C12orf40Q86WS4 652 aa21.02■□□□□ 0.96
VARS-221ENST00000463184 SFTPA1Q8IWL2 248 aa21.02■□□□□ 0.96
VARS-221ENST00000463184 PIGKQ92643 395 aa21.02■□□□□ 0.96
VARS-221ENST00000463184 FBXO32Q969P5 355 aa21.02■□□□□ 0.96
VARS-221ENST00000463184 SYAP1Q96A49 352 aaPredicted RBP21.02■□□□□ 0.96
VARS-221ENST00000463184 C7orf25Q9BPX7 421 aa21.02■□□□□ 0.96
VARS-221ENST00000463184 ARHGEF4Q9NR80 690 aa21.02■□□□□ 0.96
VARS-221ENST00000463184 EVLQ9UI08 416 aaPredicted RBP21.02■□□□□ 0.96
VARS-221ENST00000463184 SGK1O00141 431 aa21.01■□□□□ 0.95
VARS-221ENST00000463184 CLDN5O00501 218 aa21.01■□□□□ 0.95
VARS-221ENST00000463184 TNFRSF10BO14763 440 aa21.01■□□□□ 0.95
VARS-221ENST00000463184 SCAMP3O14828 347 aaKnown RBP21.01■□□□□ 0.95
VARS-221ENST00000463184 PROS1P07225 676 aa21.01■□□□□ 0.95
VARS-221ENST00000463184 KIR2DL1P43626 348 aaPredicted RBP21.01■□□□□ 0.95
VARS-221ENST00000463184 CYP2J2P51589 502 aa21.01■□□□□ 0.95
VARS-221ENST00000463184 MYL6P60660 151 aa21.01■□□□□ 0.95
VARS-221ENST00000463184 GAD2Q05329 585 aa21.01■□□□□ 0.95
VARS-221ENST00000463184 ZNF252P-AS1Q0IIN9 211 aa21.01■□□□□ 0.95
VARS-221ENST00000463184 MESP2Q0VG99 397 aa21.01■□□□□ 0.95
VARS-221ENST00000463184 LMAN2Q12907 356 aa21.01■□□□□ 0.95
VARS-221ENST00000463184 PREPLQ4J6C6 727 aaPredicted RBP21.01■□□□□ 0.95
VARS-221ENST00000463184 SPDYCQ5MJ68 293 aa21.01■□□□□ 0.95
VARS-221ENST00000463184 EMC10Q5UCC4 262 aa21.01■□□□□ 0.95
VARS-221ENST00000463184 SNX30Q5VWJ9 437 aa21.01■□□□□ 0.95
VARS-221ENST00000463184 KCNV2Q8TDN2 545 aa21.01■□□□□ 0.95
VARS-221ENST00000463184 SCFD1Q8WVM8 642 aa21.01■□□□□ 0.95
VARS-221ENST00000463184 RLN3Q8WXF3 142 aa21.01■□□□□ 0.95
VARS-221ENST00000463184 ZNF516Q92618 1163 aa21.01■□□□□ 0.95
VARS-221ENST00000463184 DHX58Q96C10 678 aa21.01■□□□□ 0.95
VARS-221ENST00000463184 ZNF396Q96N95 335 aaPredicted RBP21.01■□□□□ 0.95
VARS-221ENST00000463184 BCCIPQ9P287 314 aaKnown RBP eCLIP21.01■□□□□ 0.95
VARS-221ENST00000463184 CGNQ9P2M7 1197 aaKnown RBP21.01■□□□□ 0.95
VARS-221ENST00000463184 NXF1Q9UBU9 619 aaKnown RBP21.01■□□□□ 0.95
VARS-221ENST00000463184 ATP8B3O60423 1300 aa21.01■□□□□ 0.95
VARS-221ENST00000463184 MAP3K13O43283 966 aa21■□□□□ 0.95
VARS-221ENST00000463184 COCHO43405 550 aa21■□□□□ 0.95
VARS-221ENST00000463184 DPP6P42658 865 aa21■□□□□ 0.95
VARS-221ENST00000463184 LY6G5CQ5SRR4 150 aa21■□□□□ 0.95
VARS-221ENST00000463184 HECTD3Q5T447 861 aa21■□□□□ 0.95
VARS-221ENST00000463184 UNC13DQ70J99 1090 aa21■□□□□ 0.95
VARS-221ENST00000463184 NELFCDQ8IXH7 590 aa21■□□□□ 0.95
VARS-221ENST00000463184 C12orf56Q8IXR9 622 aa21■□□□□ 0.95
VARS-221ENST00000463184 DUSP9Q99956 384 aaKnown RBP21■□□□□ 0.95
VARS-221ENST00000463184 NUSAP1Q9BXS6 441 aaKnown RBP21■□□□□ 0.95
VARS-221ENST00000463184 XYLT2Q9H1B5 865 aa21■□□□□ 0.95
VARS-221ENST00000463184 VRTNQ9H8Y1 702 aa21■□□□□ 0.95
VARS-221ENST00000463184 COMMD8Q9NX08 183 aa21■□□□□ 0.95
VARS-221ENST00000463184 CHORDC1Q9UHD1 332 aaPredicted RBP21■□□□□ 0.95
VARS-221ENST00000463184 ZDHHC9Q9Y397 364 aa21■□□□□ 0.95
VARS-221ENST00000463184 ADAM23O75077 832 aa20.99■□□□□ 0.95
VARS-221ENST00000463184 PHACTR2O75167 634 aa20.99■□□□□ 0.95
VARS-221ENST00000463184 TUBP50607 506 aa20.99■□□□□ 0.95
VARS-221ENST00000463184 NUCB2P80303 420 aa20.99■□□□□ 0.95
VARS-221ENST00000463184 KDSRQ06136 332 aa20.99■□□□□ 0.95
VARS-221ENST00000463184 EHHADHQ08426 723 aa20.99■□□□□ 0.95
VARS-221ENST00000463184 TRIM61Q5EBN2 209 aa20.99■□□□□ 0.95
VARS-221ENST00000463184 BTBD8Q5XKL5 378 aa20.99■□□□□ 0.95
VARS-221ENST00000463184 NUDT18Q6ZVK8 323 aa20.99■□□□□ 0.95
VARS-221ENST00000463184 SYT12Q8IV01 421 aa20.99■□□□□ 0.95
VARS-221ENST00000463184 PHTF2Q8N3S3 785 aa20.99■□□□□ 0.95
VARS-221ENST00000463184 ZFRQ96KR1 1074 aaKnown RBP20.99■□□□□ 0.95
VARS-221ENST00000463184 KCNK16Q96T55 309 aa20.99■□□□□ 0.95
VARS-221ENST00000463184 GZF1Q9H116 711 aaPredicted RBP20.99■□□□□ 0.95
VARS-221ENST00000463184 MAGEF1Q9HAY2 307 aa20.99■□□□□ 0.95
VARS-221ENST00000463184 IL37Q9NZH6 218 aa20.99■□□□□ 0.95
VARS-221ENST00000463184 CIZ1Q9ULV3 898 aaPredicted RBP20.99■□□□□ 0.95
VARS-221ENST00000463184 SH3BP1Q9Y3L3 701 aa20.99■□□□□ 0.95
VARS-221ENST00000463184 MYOFQ9NZM1 2061 aa20.98■□□□□ 0.95
VARS-221ENST00000463184 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa20.98■□□□□ 0.95
VARS-221ENST00000463184 TBC1D3BA6NDS4 549 aa20.98■□□□□ 0.95
VARS-221ENST00000463184 CUTAO60888 179 aa20.98■□□□□ 0.95
VARS-221ENST00000463184 AP3M2P53677 418 aa20.98■□□□□ 0.95
VARS-221ENST00000463184 FOXC1Q12948 553 aa20.98■□□□□ 0.95
VARS-221ENST00000463184 BMT2Q1RMZ1 405 aa20.98■□□□□ 0.95
VARS-221ENST00000463184 MAP7D1Q3KQU3 841 aa20.98■□□□□ 0.95
VARS-221ENST00000463184 TRMT11Q7Z4G4 463 aaKnown RBP20.98■□□□□ 0.95
VARS-221ENST00000463184 TMEFF1Q8IYR6 380 aa20.98■□□□□ 0.95
VARS-221ENST00000463184 SCAMP5Q8TAC9 235 aa20.98■□□□□ 0.95
VARS-221ENST00000463184 HMGB4Q8WW32 186 aa20.98■□□□□ 0.95
VARS-221ENST00000463184 TNIP3Q96KP6 325 aa20.98■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms