RNA–Protein interactions for RNA: ENST00000462787.5

SMC4-204, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2 BASIC

Gene SMC4, Length 5,033 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-204ENST00000462787 TRDMT1O14717 391 aaKnown RBP16.34■□□□□ 0.21
SMC4-204ENST00000462787 CLOCKO15516 846 aa16.34■□□□□ 0.21
SMC4-204ENST00000462787 PRKCBP05771 671 aa16.34■□□□□ 0.21
SMC4-204ENST00000462787 SREBF1P36956 1147 aa16.34■□□□□ 0.21
SMC4-204ENST00000462787 HSD17B4P51659 736 aa16.34■□□□□ 0.21
SMC4-204ENST00000462787 RGS21Q2M5E4 152 aa16.34■□□□□ 0.21
SMC4-204ENST00000462787 TBCELQ5QJ74 424 aa16.34■□□□□ 0.21
SMC4-204ENST00000462787 FAM196AQ6ZSG2 479 aa16.34■□□□□ 0.21
SMC4-204ENST00000462787 USP13Q92995 863 aaPredicted RBP16.34■□□□□ 0.21
SMC4-204ENST00000462787 JPH1Q9HDC5 661 aaPredicted RBP16.34■□□□□ 0.21
SMC4-204ENST00000462787 SULT1E1P49888 294 aa16.34■□□□□ 0.21
SMC4-204ENST00000462787 PRKAA1Q13131 559 aa16.34■□□□□ 0.21
SMC4-204ENST00000462787 C2CD6Q53TS8 623 aa16.34■□□□□ 0.21
SMC4-204ENST00000462787 NAPEPLDQ6IQ20 393 aa16.34■□□□□ 0.21
SMC4-204ENST00000462787 ECHDC2Q86YB7 292 aa16.34■□□□□ 0.21
SMC4-204ENST00000462787 CLEC10AQ8IUN9 316 aa16.34■□□□□ 0.21
SMC4-204ENST00000462787 TEX12Q9BXU0 123 aa16.34■□□□□ 0.21
SMC4-204ENST00000462787 COPS7BQ9H9Q2 264 aaPredicted RBP16.34■□□□□ 0.21
SMC4-204ENST00000462787 TUBA8Q9NY65 449 aaPredicted RBP16.34■□□□□ 0.21
SMC4-204ENST00000462787 SLC5A4Q9NY91 659 aa16.34■□□□□ 0.21
SMC4-204ENST00000462787 RSL24D1Q9UHA3 163 aaKnown RBP16.34■□□□□ 0.21
SMC4-204ENST00000462787 TMEM247A6NEH6 219 aa16.33■□□□□ 0.21
SMC4-204ENST00000462787 GSC2O15499 205 aa16.33■□□□□ 0.21
SMC4-204ENST00000462787 PHGDHO43175 533 aaKnown RBP16.33■□□□□ 0.21
SMC4-204ENST00000462787 MAPTP10636 758 aaKnown RBP16.33■□□□□ 0.21
SMC4-204ENST00000462787 IFNA8P32881 189 aa16.33■□□□□ 0.21
SMC4-204ENST00000462787 CCDC81Q6ZN84 652 aa16.33■□□□□ 0.21
SMC4-204ENST00000462787 TRABD2AQ86V40 505 aa16.33■□□□□ 0.21
SMC4-204ENST00000462787 LNX1Q8TBB1 728 aaPredicted RBP16.33■□□□□ 0.21
SMC4-204ENST00000462787 CDRT15Q96T59 188 aa16.33■□□□□ 0.21
SMC4-204ENST00000462787 EBF2Q9HAK2 575 aa16.33■□□□□ 0.21
SMC4-204ENST00000462787 HMG20AQ9NP66 347 aa16.33■□□□□ 0.21
SMC4-204ENST00000462787 CYLDQ9NQC7 956 aa16.33■□□□□ 0.21
SMC4-204ENST00000462787 PRR12Q9ULL5 1215 aa16.33■□□□□ 0.21
SMC4-204ENST00000462787 GPR75-ASB3A0A0A6YYF3 556 aa16.33■□□□□ 0.2
SMC4-204ENST00000462787 KBTBD13C9JR72 458 aa16.33■□□□□ 0.2
SMC4-204ENST00000462787 NFKBIAP25963 317 aa16.33■□□□□ 0.2
SMC4-204ENST00000462787 CDK7P50613 346 aa16.33■□□□□ 0.2
SMC4-204ENST00000462787 CHRNB3Q05901 458 aa16.33■□□□□ 0.2
SMC4-204ENST00000462787 OTOAQ7RTW8 1153 aa16.33■□□□□ 0.2
SMC4-204ENST00000462787 TRIM69Q86WT6 500 aa16.33■□□□□ 0.2
SMC4-204ENST00000462787 ULK2Q8IYT8 1036 aa16.33■□□□□ 0.2
SMC4-204ENST00000462787 SLCO1B3Q9NPD5 702 aa16.33■□□□□ 0.2
SMC4-204ENST00000462787 ARHGEF3Q9NR81 526 aa16.33■□□□□ 0.2
SMC4-204ENST00000462787 SH3GLB1Q9Y371 365 aa16.33■□□□□ 0.2
SMC4-204ENST00000462787 PIK3C2BO00750 1634 aa16.33■□□□□ 0.2
SMC4-204ENST00000462787 FAM237BA0A1B0GVD1 139 aa16.33■□□□□ 0.2
SMC4-204ENST00000462787 E5RI56 91 aa16.33■□□□□ 0.2
SMC4-204ENST00000462787 GARTP22102 1010 aa16.33■□□□□ 0.2
SMC4-204ENST00000462787 AADACL2Q6P093 401 aa16.33■□□□□ 0.2
SMC4-204ENST00000462787 ABRAQ8N0Z2 381 aa16.33■□□□□ 0.2
SMC4-204ENST00000462787 TAS1R2Q8TE23 839 aa16.33■□□□□ 0.2
SMC4-204ENST00000462787 LRRC40Q9H9A6 602 aa16.33■□□□□ 0.2
SMC4-204ENST00000462787 DNPEPQ9ULA0 475 aa16.33■□□□□ 0.2
SMC4-204ENST00000462787 TNPO2O14787 897 aaKnown RBP16.33■□□□□ 0.2
SMC4-204ENST00000462787 LCP1P13796 627 aa16.33■□□□□ 0.2
SMC4-204ENST00000462787 ETS2P15036 469 aa16.33■□□□□ 0.2
SMC4-204ENST00000462787 TGM2P21980 687 aa16.33■□□□□ 0.2
SMC4-204ENST00000462787 RGS7P49802 495 aa16.33■□□□□ 0.2
SMC4-204ENST00000462787 GPSM2P81274 684 aa16.33■□□□□ 0.2
SMC4-204ENST00000462787 IRF2BP2Q7Z5L9 587 aa16.33■□□□□ 0.2
SMC4-204ENST00000462787 ARHGEF19Q8IW93 802 aa16.33■□□□□ 0.2
SMC4-204ENST00000462787 MED15Q96RN5 788 aa16.33■□□□□ 0.2
SMC4-204ENST00000462787 RBP5P82980 135 aa16.32■□□□□ 0.2
SMC4-204ENST00000462787 MGAT5Q09328 741 aa16.32■□□□□ 0.2
SMC4-204ENST00000462787 DENND1BQ6P3S1 775 aa16.32■□□□□ 0.2
SMC4-204ENST00000462787 STN1Q9H668 368 aaKnown RBP16.32■□□□□ 0.2
SMC4-204ENST00000462787 LYNP07948 512 aa16.32■□□□□ 0.2
SMC4-204ENST00000462787 CCDC130P13994 396 aa16.32■□□□□ 0.2
SMC4-204ENST00000462787 TSTA3Q13630 321 aaPredicted RBP16.32■□□□□ 0.2
SMC4-204ENST00000462787 CCDC85BQ15834 202 aaPredicted RBP16.32■□□□□ 0.2
SMC4-204ENST00000462787 DSTYKQ6XUX3 929 aa16.32■□□□□ 0.2
SMC4-204ENST00000462787 GADL1Q6ZQY3 521 aa16.32■□□□□ 0.2
SMC4-204ENST00000462787 DHFR2Q86XF0 187 aa16.32■□□□□ 0.2
SMC4-204ENST00000462787 SULF1Q8IWU6 871 aa16.32■□□□□ 0.2
SMC4-204ENST00000462787 MTMR9Q96QG7 549 aa16.32■□□□□ 0.2
SMC4-204ENST00000462787 PLEKHA5Q9HAU0 1116 aa16.32■□□□□ 0.2
SMC4-204ENST00000462787 UBA6A0AVT1 1052 aaPredicted RBP16.32■□□□□ 0.2
SMC4-204ENST00000462787 MAGEB2O15479 319 aa16.32■□□□□ 0.2
SMC4-204ENST00000462787 CHKAP35790 457 aa16.32■□□□□ 0.2
SMC4-204ENST00000462787 IL17AQ16552 155 aa16.32■□□□□ 0.2
SMC4-204ENST00000462787 AGAP9Q5VTM2 703 aa16.32■□□□□ 0.2
SMC4-204ENST00000462787 PRMT9Q6P2P2 845 aa16.32■□□□□ 0.2
SMC4-204ENST00000462787 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.32■□□□□ 0.21e-6■■■■■ 406.9
SMC4-204ENST00000462787 CATSPER4Q7RTX7 472 aa16.32■□□□□ 0.2
SMC4-204ENST00000462787 RDM1Q8NG50 284 aa16.32■□□□□ 0.2
SMC4-204ENST00000462787 SH3GL1Q99961 368 aa16.32■□□□□ 0.2
SMC4-204ENST00000462787 C9orf16Q9BUW7 83 aa16.32■□□□□ 0.2
SMC4-204ENST00000462787 TRIM62Q9BVG3 475 aa16.32■□□□□ 0.2
SMC4-204ENST00000462787 NCKIPSDQ9NZQ3 722 aa16.32■□□□□ 0.2
SMC4-204ENST00000462787 SLC13A4Q9UKG4 626 aa16.32■□□□□ 0.2
SMC4-204ENST00000462787 DRG1Q9Y295 367 aaKnown RBP16.32■□□□□ 0.2
SMC4-204ENST00000462787 EEF2KO00418 725 aaKnown RBP16.31■□□□□ 0.2
SMC4-204ENST00000462787 MPOP05164 745 aa16.31■□□□□ 0.2
SMC4-204ENST00000462787 CYP1A2P05177 515 aa16.31■□□□□ 0.2
SMC4-204ENST00000462787 FOLH1Q04609 750 aa16.31■□□□□ 0.2
SMC4-204ENST00000462787 KCNT1Q5JUK3 1230 aa16.31■□□□□ 0.2
SMC4-204ENST00000462787 PLA2G4FQ68DD2 849 aa16.31■□□□□ 0.2
SMC4-204ENST00000462787 LINC00523Q86TU6 105 aa16.31■□□□□ 0.2
SMC4-204ENST00000462787 PIWIL2Q8TC59 973 aaKnown RBP16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms