RNA–Protein interactions for RNA: ENST00000461328.1

VARS-219, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 662 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-219ENST00000461328 WHAMMQ8TF30 809 aa16.28■□□□□ 0.2
VARS-219ENST00000461328 OSCP1Q8WVF1 389 aa16.28■□□□□ 0.2
VARS-219ENST00000461328 ATRIPQ8WXE1 791 aa16.28■□□□□ 0.2
VARS-219ENST00000461328 CYFIP2Q96F07 1278 aa16.28■□□□□ 0.2
VARS-219ENST00000461328 HEXIM2Q96MH2 286 aaKnown RBP16.28■□□□□ 0.2
VARS-219ENST00000461328 NT5C1BQ96P26 610 aa16.28■□□□□ 0.2
VARS-219ENST00000461328 WNT6Q9Y6F9 365 aa16.28■□□□□ 0.2
VARS-219ENST00000461328 CACNA1IQ9P0X4 2223 aa16.28■□□□□ 0.2
VARS-219ENST00000461328 AFPP02771 609 aaKnown RBP16.27■□□□□ 0.2
VARS-219ENST00000461328 TRIM59Q8IWR1 403 aa16.27■□□□□ 0.2
VARS-219ENST00000461328 SCAMP5Q8TAC9 235 aa16.27■□□□□ 0.2
VARS-219ENST00000461328 ATP2A3Q93084 1043 aa16.27■□□□□ 0.2
VARS-219ENST00000461328 TMEM176AQ96HP8 235 aa16.27■□□□□ 0.2
VARS-219ENST00000461328 CNOT6LQ96LI5 555 aaKnown RBP16.27■□□□□ 0.2
VARS-219ENST00000461328 HNRNPABQ99729 332 aaKnown RBP16.27■□□□□ 0.2
VARS-219ENST00000461328 SMOQ99835 787 aa16.27■□□□□ 0.2
VARS-219ENST00000461328 ZSCAN32Q9NX65 697 aa16.27■□□□□ 0.2
VARS-219ENST00000461328 PCDHGA2Q9Y5H1 932 aa16.27■□□□□ 0.2
VARS-219ENST00000461328 ANAPC1Q9H1A4 1944 aa16.26■□□□□ 0.19
VARS-219ENST00000461328 OTOL1A6NHN0 477 aaPredicted RBP16.26■□□□□ 0.19
VARS-219ENST00000461328 P4HA2O15460 535 aa16.26■□□□□ 0.19
VARS-219ENST00000461328 BEST1O76090 585 aa16.26■□□□□ 0.19
VARS-219ENST00000461328 CD19P15391 556 aa16.26■□□□□ 0.19
VARS-219ENST00000461328 TCF3P15923 654 aa16.26■□□□□ 0.19
VARS-219ENST00000461328 CXCL12P48061 93 aa16.26■□□□□ 0.19
VARS-219ENST00000461328 SLC7A9P82251 487 aa16.26■□□□□ 0.19
VARS-219ENST00000461328 KCNH2Q12809 1159 aa16.26■□□□□ 0.19
VARS-219ENST00000461328 GRSF1Q12849 480 aaKnown RBP eCLIP16.26■□□□□ 0.19
VARS-219ENST00000461328 DPCR1Q3MIW9 517 aa16.26■□□□□ 0.19
VARS-219ENST00000461328 MAMSTRQ6ZN01 415 aa16.26■□□□□ 0.19
VARS-219ENST00000461328 Q6ZS52 159 aa16.26■□□□□ 0.19
VARS-219ENST00000461328 PPM1KQ8N3J5 372 aa16.26■□□□□ 0.19
VARS-219ENST00000461328 SPEM1Q8N4L4 309 aa16.26■□□□□ 0.19
VARS-219ENST00000461328 ZMIZ2Q8NF64 920 aa16.26■□□□□ 0.19
VARS-219ENST00000461328 OVCA2Q8WZ82 227 aa16.26■□□□□ 0.19
VARS-219ENST00000461328 EXOC4Q96A65 974 aa16.26■□□□□ 0.19
VARS-219ENST00000461328 NACA2Q9H009 215 aa16.26■□□□□ 0.19
VARS-219ENST00000461328 RNF38Q9H0F5 515 aa16.26■□□□□ 0.19
VARS-219ENST00000461328 FBXO44Q9H4M3 255 aa16.26■□□□□ 0.19
VARS-219ENST00000461328 FAM124BQ9H5Z6 455 aaPredicted RBP16.26■□□□□ 0.19
VARS-219ENST00000461328 ECT2Q9H8V3 914 aa16.26■□□□□ 0.19
VARS-219ENST00000461328 SMPD4Q9NXE4 827 aa16.26■□□□□ 0.19
VARS-219ENST00000461328 GMIPQ9P107 970 aa16.26■□□□□ 0.19
VARS-219ENST00000461328 CPQQ9Y646 472 aa16.26■□□□□ 0.19
VARS-219ENST00000461328 VPS13AQ96RL7 3174 aa16.26■□□□□ 0.19
VARS-219ENST00000461328 LEFTY2O00292 366 aa16.25■□□□□ 0.19
VARS-219ENST00000461328 TNFRSF10BO14763 440 aa16.25■□□□□ 0.19
VARS-219ENST00000461328 PMM2O15305 246 aa16.25■□□□□ 0.19
VARS-219ENST00000461328 OLFM2O95897 454 aa16.25■□□□□ 0.19
VARS-219ENST00000461328 OAS1P00973 400 aaKnown RBP16.25■□□□□ 0.19
VARS-219ENST00000461328 MBL2P11226 248 aaPredicted RBP16.25■□□□□ 0.19
VARS-219ENST00000461328 MTIF2P46199 727 aaKnown RBP16.25■□□□□ 0.19
VARS-219ENST00000461328 RAD23BP54727 409 aa16.25■□□□□ 0.19
VARS-219ENST00000461328 NRLP54845 237 aa16.25■□□□□ 0.19
VARS-219ENST00000461328 MARSP56192 900 aaKnown RBP16.25■□□□□ 0.19
VARS-219ENST00000461328 SLC8A3P57103 927 aa16.25■□□□□ 0.19
VARS-219ENST00000461328 SATB1Q01826 763 aa16.25■□□□□ 0.19
VARS-219ENST00000461328 CCINQ13939 588 aa16.25■□□□□ 0.19
VARS-219ENST00000461328 GAS6Q14393 721 aa16.25■□□□□ 0.19
VARS-219ENST00000461328 EML3Q32P44 896 aa16.25■□□□□ 0.19
VARS-219ENST00000461328 PPP1R26Q5T8A7 1209 aaPredicted RBP16.25■□□□□ 0.19
VARS-219ENST00000461328 CLEC20AQ6ZU45 233 aa16.25■□□□□ 0.19
VARS-219ENST00000461328 SYNPOQ8N3V7 929 aa16.25■□□□□ 0.19
VARS-219ENST00000461328 SLC4A11Q8NBS3 891 aa16.25■□□□□ 0.19
VARS-219ENST00000461328 FAM126AQ9BYI3 521 aaPredicted RBP16.25■□□□□ 0.19
VARS-219ENST00000461328 CSNK1G1Q9HCP0 422 aa16.25■□□□□ 0.19
VARS-219ENST00000461328 COMMD8Q9NX08 183 aa16.25■□□□□ 0.19
VARS-219ENST00000461328 CHORDC1Q9UHD1 332 aaPredicted RBP16.25■□□□□ 0.19
VARS-219ENST00000461328 TRDMT1O14717 391 aaKnown RBP16.24■□□□□ 0.19
VARS-219ENST00000461328 NFATC1O95644 943 aa16.24■□□□□ 0.19
VARS-219ENST00000461328 ACO1P21399 889 aaKnown RBP16.24■□□□□ 0.19
VARS-219ENST00000461328 GJA4P35212 333 aa16.24■□□□□ 0.19
VARS-219ENST00000461328 ZXDBP98169 803 aa16.24■□□□□ 0.19
VARS-219ENST00000461328 NR1H3Q13133 447 aa16.24■□□□□ 0.19
VARS-219ENST00000461328 GOLGA7BQ2TAP0 167 aa16.24■□□□□ 0.19
VARS-219ENST00000461328 TMEM196Q5HYL7 178 aa16.24■□□□□ 0.19
VARS-219ENST00000461328 HECTD3Q5T447 861 aa16.24■□□□□ 0.19
VARS-219ENST00000461328 GPRIN1Q7Z2K8 1008 aa16.24■□□□□ 0.19
VARS-219ENST00000461328 FAM114A1Q8IWE2 563 aa16.24■□□□□ 0.19
VARS-219ENST00000461328 ZBTB44Q8NCP5 570 aa16.24■□□□□ 0.19
VARS-219ENST00000461328 GPT2Q8TD30 523 aa16.24■□□□□ 0.19
VARS-219ENST00000461328 NELL1Q92832 810 aa16.24■□□□□ 0.19
VARS-219ENST00000461328 P2RY13Q9BPV8 354 aa16.24■□□□□ 0.19
VARS-219ENST00000461328 HINFPQ9BQA5 517 aa16.24■□□□□ 0.19
VARS-219ENST00000461328 INTS2Q9H0H0 1204 aaKnown RBP16.24■□□□□ 0.19
VARS-219ENST00000461328 LINC00597Q9H2U6 94 aa16.24■□□□□ 0.19
VARS-219ENST00000461328 IL37Q9NZH6 218 aa16.24■□□□□ 0.19
VARS-219ENST00000461328 PCDHB4Q9Y5E5 795 aa16.24■□□□□ 0.19
VARS-219ENST00000461328 HELZP42694 1942 aaKnown RBP16.23■□□□□ 0.19
VARS-219ENST00000461328 USP34Q70CQ2 3546 aa16.23■□□□□ 0.19
VARS-219ENST00000461328 CYP26A1O43174 497 aa16.23■□□□□ 0.19
VARS-219ENST00000461328 COCHO43405 550 aa16.23■□□□□ 0.19
VARS-219ENST00000461328 TDGF1P13385 188 aa16.23■□□□□ 0.19
VARS-219ENST00000461328 SGO2Q562F6 1265 aa16.23■□□□□ 0.19
VARS-219ENST00000461328 FSTL4Q6MZW2 842 aa16.23■□□□□ 0.19
VARS-219ENST00000461328 TMEM270Q6UE05 265 aa16.23■□□□□ 0.19
VARS-219ENST00000461328 DDX42Q86XP3 938 aaKnown RBP eCLIP16.23■□□□□ 0.19
VARS-219ENST00000461328 CHFRQ96EP1 664 aa16.23■□□□□ 0.19
VARS-219ENST00000461328 DUSP16Q9BY84 665 aa16.23■□□□□ 0.19
VARS-219ENST00000461328 PNPLA8Q9NP80 782 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms