RNA–Protein interactions for RNA: ENST00000460739.5

SOX2-OT-201, SOX2 overlapping transcript, humanhuman

TSL 4 BASIC

Gene SOX2-OT, Length 609 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-201ENST00000460739 BEST1O76090 585 aa12.51□□□□□ -0.41
SOX2-OT-201ENST00000460739 ZDHHC11BP0C7U3 371 aa12.51□□□□□ -0.41
SOX2-OT-201ENST00000460739 TGM1P22735 817 aa12.51□□□□□ -0.41
SOX2-OT-201ENST00000460739 HOXC13P31276 330 aa12.51□□□□□ -0.41
SOX2-OT-201ENST00000460739 GTF2H1P32780 548 aa12.51□□□□□ -0.41
SOX2-OT-201ENST00000460739 TUBP50607 506 aa12.51□□□□□ -0.41
SOX2-OT-201ENST00000460739 NUCB2P80303 420 aa12.51□□□□□ -0.41
SOX2-OT-201ENST00000460739 ORC1Q13415 861 aa12.51□□□□□ -0.41
SOX2-OT-201ENST00000460739 PNOCQ13519 176 aa12.51□□□□□ -0.41
SOX2-OT-201ENST00000460739 SIM2Q14190 667 aaPredicted RBP12.51□□□□□ -0.41
SOX2-OT-201ENST00000460739 GAB4Q2WGN9 574 aa12.51□□□□□ -0.41
SOX2-OT-201ENST00000460739 COBLL1Q53SF7 1204 aa12.51□□□□□ -0.41
SOX2-OT-201ENST00000460739 HECTD3Q5T447 861 aa12.51□□□□□ -0.41
SOX2-OT-201ENST00000460739 PRR23BQ6ZRT6 265 aa12.51□□□□□ -0.41
SOX2-OT-201ENST00000460739 FILIP1Q7Z7B0 1213 aa12.51□□□□□ -0.41
SOX2-OT-201ENST00000460739 DDX42Q86XP3 938 aaKnown RBP eCLIP12.51□□□□□ -0.41
SOX2-OT-201ENST00000460739 SMYD4Q8IYR2 804 aaPredicted RBP12.51□□□□□ -0.41
SOX2-OT-201ENST00000460739 C12orf29Q8N999 325 aa12.51□□□□□ -0.41
SOX2-OT-201ENST00000460739 ENGASEQ8NFI3 743 aa12.51□□□□□ -0.41
SOX2-OT-201ENST00000460739 TWNKQ96RR1 684 aa12.51□□□□□ -0.41
SOX2-OT-201ENST00000460739 NIF3L1Q9GZT8 377 aa12.51□□□□□ -0.41
SOX2-OT-201ENST00000460739 CYP3A43Q9HB55 503 aa12.51□□□□□ -0.41
SOX2-OT-201ENST00000460739 APOBEC3GQ9HC16 384 aaKnown RBP12.51□□□□□ -0.41
SOX2-OT-201ENST00000460739 TMEM8AQ9HCN3 771 aa12.51□□□□□ -0.41
SOX2-OT-201ENST00000460739 FAM49BQ9NUQ9 324 aa12.51□□□□□ -0.41
SOX2-OT-201ENST00000460739 RMND1Q9NWS8 449 aa12.51□□□□□ -0.41
SOX2-OT-201ENST00000460739 SMPD4Q9NXE4 827 aa12.51□□□□□ -0.41
SOX2-OT-201ENST00000460739 CFAP97Q9P2B7 532 aa12.51□□□□□ -0.41
SOX2-OT-201ENST00000460739 CHORDC1Q9UHD1 332 aaPredicted RBP12.51□□□□□ -0.41
SOX2-OT-201ENST00000460739 CEP250Q9BV73 2442 aa12.5□□□□□ -0.41
SOX2-OT-201ENST00000460739 E2F8A0AVK6 867 aa12.5□□□□□ -0.41
SOX2-OT-201ENST00000460739 COCHO43405 550 aa12.5□□□□□ -0.41
SOX2-OT-201ENST00000460739 LRP3O75074 770 aa12.5□□□□□ -0.41
SOX2-OT-201ENST00000460739 CYP17A1P05093 508 aa12.5□□□□□ -0.41
SOX2-OT-201ENST00000460739 RETP07949 1114 aa12.5□□□□□ -0.41
SOX2-OT-201ENST00000460739 MBL2P11226 248 aaPredicted RBP12.5□□□□□ -0.41
SOX2-OT-201ENST00000460739 TRIM21P19474 475 aaKnown RBP12.5□□□□□ -0.41
SOX2-OT-201ENST00000460739 OPRD1P41143 372 aa12.5□□□□□ -0.41
SOX2-OT-201ENST00000460739 SRSF5Q13243 272 aaKnown RBP12.5□□□□□ -0.41
SOX2-OT-201ENST00000460739 LPAL2Q16609 132 aa12.5□□□□□ -0.41
SOX2-OT-201ENST00000460739 KRT39Q6A163 491 aa12.5□□□□□ -0.41
SOX2-OT-201ENST00000460739 SYT13Q7L8C5 426 aa12.5□□□□□ -0.41
SOX2-OT-201ENST00000460739 CAMKK1Q8N5S9 505 aa12.5□□□□□ -0.41
SOX2-OT-201ENST00000460739 RPLP0P6Q8NHW5 317 aa12.5□□□□□ -0.41
SOX2-OT-201ENST00000460739 SPATA20Q8TB22 786 aa12.5□□□□□ -0.41
SOX2-OT-201ENST00000460739 FAXDC2Q96IV6 333 aa12.5□□□□□ -0.41
SOX2-OT-201ENST00000460739 ZFRQ96KR1 1074 aaKnown RBP12.5□□□□□ -0.41
SOX2-OT-201ENST00000460739 GSDMAQ96QA5 445 aa12.5□□□□□ -0.41
SOX2-OT-201ENST00000460739 HNRNPABQ99729 332 aaKnown RBP12.5□□□□□ -0.41
SOX2-OT-201ENST00000460739 DUSP9Q99956 384 aaKnown RBP12.5□□□□□ -0.41
SOX2-OT-201ENST00000460739 NT5C1AQ9BXI3 368 aa12.5□□□□□ -0.41
SOX2-OT-201ENST00000460739 FBXO44Q9H4M3 255 aa12.5□□□□□ -0.41
SOX2-OT-201ENST00000460739 CCSER2Q9H7U1 834 aa12.5□□□□□ -0.41
SOX2-OT-201ENST00000460739 PARD6AQ9NPB6 346 aa12.5□□□□□ -0.41
SOX2-OT-201ENST00000460739 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.5□□□□□ -0.41
SOX2-OT-201ENST00000460739 DLL3Q9NYJ7 618 aa12.5□□□□□ -0.41
SOX2-OT-201ENST00000460739 SLC8A2Q9UPR5 921 aa12.5□□□□□ -0.41
SOX2-OT-201ENST00000460739 MYOFQ9NZM1 2061 aa12.5□□□□□ -0.41
SOX2-OT-201ENST00000460739 SPAG17Q6Q759 2223 aa12.49□□□□□ -0.41
SOX2-OT-201ENST00000460739 GOLGA6L4A6NEF3 574 aa12.49□□□□□ -0.41
SOX2-OT-201ENST00000460739 CILPO75339 1184 aa12.49□□□□□ -0.41
SOX2-OT-201ENST00000460739 FAM200BP0CF97 657 aa12.49□□□□□ -0.41
SOX2-OT-201ENST00000460739 PRCPP42785 496 aa12.49□□□□□ -0.41
SOX2-OT-201ENST00000460739 PXNP49023 591 aaPredicted RBP12.49□□□□□ -0.41
SOX2-OT-201ENST00000460739 MAP3K7CLP57077 242 aa12.49□□□□□ -0.41
SOX2-OT-201ENST00000460739 PUM1Q14671 1186 aaKnown RBP eCLIP12.49□□□□□ -0.41
SOX2-OT-201ENST00000460739 DHCR24Q15392 516 aa12.49□□□□□ -0.41
SOX2-OT-201ENST00000460739 ZNF658Q5TYW1 1059 aaPredicted RBP12.49□□□□□ -0.41
SOX2-OT-201ENST00000460739 CLEC20AQ6ZU45 233 aa12.49□□□□□ -0.41
SOX2-OT-201ENST00000460739 ZC3H3Q8IXZ2 948 aaKnown RBP12.49□□□□□ -0.41
SOX2-OT-201ENST00000460739 CCDC150Q8NCX0 1101 aa12.49□□□□□ -0.41
SOX2-OT-201ENST00000460739 CCDC26Q8TAB7 109 aa12.49□□□□□ -0.41
SOX2-OT-201ENST00000460739 WHAMMQ8TF30 809 aa12.49□□□□□ -0.41
SOX2-OT-201ENST00000460739 GAB3Q8WWW8 586 aa12.49□□□□□ -0.41
SOX2-OT-201ENST00000460739 ACDQ96AP0 544 aa12.49□□□□□ -0.41
SOX2-OT-201ENST00000460739 OTUB2Q96DC9 234 aa12.49□□□□□ -0.41
SOX2-OT-201ENST00000460739 CYFIP2Q96F07 1278 aa12.49□□□□□ -0.41
SOX2-OT-201ENST00000460739 EEF2KMTQ96G04 330 aa12.49□□□□□ -0.41
SOX2-OT-201ENST00000460739 MMRN2Q9H8L6 949 aa12.49□□□□□ -0.41
SOX2-OT-201ENST00000460739 PNPLA8Q9NP80 782 aa12.49□□□□□ -0.41
SOX2-OT-201ENST00000460739 GMIPQ9P107 970 aa12.49□□□□□ -0.41
SOX2-OT-201ENST00000460739 TBC1D14Q9P2M4 693 aa12.49□□□□□ -0.41
SOX2-OT-201ENST00000460739 PRR5-ARHGAP8B1AHC4 643 aa12.48□□□□□ -0.41
SOX2-OT-201ENST00000460739 HHLA1C9JL84 531 aa12.48□□□□□ -0.41
SOX2-OT-201ENST00000460739 K7EQS6 105 aa12.48□□□□□ -0.41
SOX2-OT-201ENST00000460739 CETN3O15182 167 aa12.48□□□□□ -0.41
SOX2-OT-201ENST00000460739 STX10O60499 249 aa12.48□□□□□ -0.41
SOX2-OT-201ENST00000460739 SMC2O95347 1197 aa12.48□□□□□ -0.41
SOX2-OT-201ENST00000460739 EPB41P11171 864 aaKnown RBP12.48□□□□□ -0.41
SOX2-OT-201ENST00000460739 CD58P19256 250 aa12.48□□□□□ -0.41
SOX2-OT-201ENST00000460739 SDHBP21912 280 aa12.48□□□□□ -0.41
SOX2-OT-201ENST00000460739 ADORA2BP29275 332 aa12.48□□□□□ -0.41
SOX2-OT-201ENST00000460739 EIF2DP41214 584 aaKnown RBP12.48□□□□□ -0.41
SOX2-OT-201ENST00000460739 PGFP49763 221 aa12.48□□□□□ -0.41
SOX2-OT-201ENST00000460739 MXI1P50539 228 aa12.48□□□□□ -0.41
SOX2-OT-201ENST00000460739 ARHGAP8P85298 464 aa12.48□□□□□ -0.41
SOX2-OT-201ENST00000460739 LMNB2Q03252 620 aa12.48□□□□□ -0.41
SOX2-OT-201ENST00000460739 SPEM2Q0P670 501 aa12.48□□□□□ -0.41
SOX2-OT-201ENST00000460739 RSPO4Q2I0M5 234 aaPredicted RBP12.48□□□□□ -0.41
SOX2-OT-201ENST00000460739 RHBDF2Q6PJF5 856 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms