RNA–Protein interactions for RNA: ENST00000459997.1

SRM-202, Transcript of spermidine synthase, humanhuman

TSL 5

Gene SRM, Length 731 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRM-202ENST00000459997 PCDHA5Q9Y5H7 936 aa22.13■■□□□ 1.13
SRM-202ENST00000459997 OTOGLQ3ZCN5 2332 aa22.13■■□□□ 1.13
SRM-202ENST00000459997 SCAMP3O14828 347 aaKnown RBP22.12■■□□□ 1.13
SRM-202ENST00000459997 ATG13O75143 517 aa22.12■■□□□ 1.13
SRM-202ENST00000459997 RNF40O75150 1001 aa22.12■■□□□ 1.13
SRM-202ENST00000459997 FAM200BP0CF97 657 aa22.12■■□□□ 1.13
SRM-202ENST00000459997 MXI1P50539 228 aa22.12■■□□□ 1.13
SRM-202ENST00000459997 COBLL1Q53SF7 1204 aa22.12■■□□□ 1.13
SRM-202ENST00000459997 LONP2Q86WA8 852 aa22.12■■□□□ 1.13
SRM-202ENST00000459997 SECISBP2LQ93073 1101 aaKnown RBP22.12■■□□□ 1.13
SRM-202ENST00000459997 TIGD1Q96MW7 591 aa22.12■■□□□ 1.13
SRM-202ENST00000459997 NT5C1AQ9BXI3 368 aa22.12■■□□□ 1.13
SRM-202ENST00000459997 CSNK1G1Q9HCP0 422 aa22.12■■□□□ 1.13
SRM-202ENST00000459997 COMMD8Q9NX08 183 aa22.12■■□□□ 1.13
SRM-202ENST00000459997 GMIPQ9P107 970 aa22.12■■□□□ 1.13
SRM-202ENST00000459997 RAB23Q9ULC3 237 aa22.12■■□□□ 1.13
SRM-202ENST00000459997 SPTBN4Q9H254 2564 aa22.12■■□□□ 1.13
SRM-202ENST00000459997 COCHO43405 550 aa22.11■■□□□ 1.13
SRM-202ENST00000459997 STX10O60499 249 aa22.11■■□□□ 1.13
SRM-202ENST00000459997 HOXC13P31276 330 aa22.11■■□□□ 1.13
SRM-202ENST00000459997 ANP32AP39687 249 aaKnown RBP22.11■■□□□ 1.13
SRM-202ENST00000459997 MCCD1P59942 119 aaPredicted RBP22.11■■□□□ 1.13
SRM-202ENST00000459997 LPAL2Q16609 132 aa22.11■■□□□ 1.13
SRM-202ENST00000459997 HECTD3Q5T447 861 aa22.11■■□□□ 1.13
SRM-202ENST00000459997 SNX30Q5VWJ9 437 aa22.11■■□□□ 1.13
SRM-202ENST00000459997 DDX42Q86XP3 938 aaKnown RBP eCLIP22.11■■□□□ 1.13
SRM-202ENST00000459997 KIAA1958Q8N8K9 716 aa22.11■■□□□ 1.13
SRM-202ENST00000459997 FBXL13Q8NEE6 735 aa22.11■■□□□ 1.13
SRM-202ENST00000459997 SPATA20Q8TB22 786 aa22.11■■□□□ 1.13
SRM-202ENST00000459997 SEMA4DQ92854 862 aa22.11■■□□□ 1.13
SRM-202ENST00000459997 HNRNPABQ99729 332 aaKnown RBP22.11■■□□□ 1.13
SRM-202ENST00000459997 CCSER2Q9H7U1 834 aa22.11■■□□□ 1.13
SRM-202ENST00000459997 CIZ1Q9ULV3 898 aaPredicted RBP22.11■■□□□ 1.13
SRM-202ENST00000459997 MYH10P35580 1976 aa22.1■■□□□ 1.13
SRM-202ENST00000459997 FAM92AA1XBS5 289 aa22.1■■□□□ 1.13
SRM-202ENST00000459997 SLC9A3R1O14745 358 aaPredicted RBP22.1■■□□□ 1.13
SRM-202ENST00000459997 CILPO75339 1184 aa22.1■■□□□ 1.13
SRM-202ENST00000459997 HOXA6P31267 233 aa22.1■■□□□ 1.13
SRM-202ENST00000459997 SRSF5Q13243 272 aaKnown RBP22.1■■□□□ 1.13
SRM-202ENST00000459997 FBXO43Q4G163 708 aa22.1■■□□□ 1.13
SRM-202ENST00000459997 DCAF17Q5H9S7 520 aaPredicted RBP22.1■■□□□ 1.13
SRM-202ENST00000459997 TCERG1LQ5VWI1 586 aa22.1■■□□□ 1.13
SRM-202ENST00000459997 ANKRD40Q6AI12 368 aa22.1■■□□□ 1.13
SRM-202ENST00000459997 PRR23BQ6ZRT6 265 aa22.1■■□□□ 1.13
SRM-202ENST00000459997 WHAMMQ8TF30 809 aa22.1■■□□□ 1.13
SRM-202ENST00000459997 JAKMIP2Q96AA8 810 aa22.1■■□□□ 1.13
SRM-202ENST00000459997 CYFIP2Q96F07 1278 aa22.1■■□□□ 1.13
SRM-202ENST00000459997 GTPBP4Q9BZE4 634 aaKnown RBP22.1■■□□□ 1.13
SRM-202ENST00000459997 DNAI2Q9GZS0 605 aa22.1■■□□□ 1.13
SRM-202ENST00000459997 FBXO44Q9H4M3 255 aa22.1■■□□□ 1.13
SRM-202ENST00000459997 SLC8A2Q9UPR5 921 aa22.1■■□□□ 1.13
SRM-202ENST00000459997 MYO16Q9Y6X6 1858 aa22.1■■□□□ 1.13
SRM-202ENST00000459997 DMXL1Q9Y485 3027 aa22.1■■□□□ 1.13
SRM-202ENST00000459997 SLC16A3O15427 465 aaKnown RBP22.09■■□□□ 1.13
SRM-202ENST00000459997 HRO43593 1189 aa22.09■■□□□ 1.13
SRM-202ENST00000459997 CYP17A1P05093 508 aa22.09■■□□□ 1.13
SRM-202ENST00000459997 ZDHHC11BP0C7U3 371 aa22.09■■□□□ 1.13
SRM-202ENST00000459997 CNR2P34972 360 aa22.09■■□□□ 1.13
SRM-202ENST00000459997 ID4P47928 161 aa22.09■■□□□ 1.13
SRM-202ENST00000459997 TUBP50607 506 aa22.09■■□□□ 1.13
SRM-202ENST00000459997 PMS1P54277 932 aaKnown RBP22.09■■□□□ 1.13
SRM-202ENST00000459997 FKBP3Q00688 224 aaKnown RBP22.09■■□□□ 1.13
SRM-202ENST00000459997 SIM2Q14190 667 aaPredicted RBP22.09■■□□□ 1.13
SRM-202ENST00000459997 CLEC20AQ6ZU45 233 aa22.09■■□□□ 1.13
SRM-202ENST00000459997 EZH1Q92800 747 aaPredicted RBP22.09■■□□□ 1.13
SRM-202ENST00000459997 ZFRQ96KR1 1074 aaKnown RBP22.09■■□□□ 1.13
SRM-202ENST00000459997 NACA2Q9H009 215 aa22.09■■□□□ 1.13
SRM-202ENST00000459997 RAB20Q9NX57 234 aa22.09■■□□□ 1.13
SRM-202ENST00000459997 GMEB2Q9UKD1 530 aa22.09■■□□□ 1.13
SRM-202ENST00000459997 GPR179Q6PRD1 2367 aa22.09■■□□□ 1.13
SRM-202ENST00000459997 TRIM49BA6NDI0 452 aa22.08■■□□□ 1.13
SRM-202ENST00000459997 OPRD1P41143 372 aa22.08■■□□□ 1.13
SRM-202ENST00000459997 LRRC63Q05C16 580 aa22.08■■□□□ 1.13
SRM-202ENST00000459997 ZNF394Q53GI3 561 aa22.08■■□□□ 1.13
SRM-202ENST00000459997 LAIR1Q6GTX8 287 aa22.08■■□□□ 1.13
SRM-202ENST00000459997 GPRIN1Q7Z2K8 1008 aa22.08■■□□□ 1.13
SRM-202ENST00000459997 WDR5BQ86VZ2 330 aa22.08■■□□□ 1.13
SRM-202ENST00000459997 ZC3H3Q8IXZ2 948 aaKnown RBP22.08■■□□□ 1.13
SRM-202ENST00000459997 ADGRG2Q8IZP9 1017 aa22.08■■□□□ 1.13
SRM-202ENST00000459997 RPLP0P6Q8NHW5 317 aa22.08■■□□□ 1.13
SRM-202ENST00000459997 TLR8Q9NR97 1041 aaKnown RBP22.08■■□□□ 1.13
SRM-202ENST00000459997 KIAA1549LQ6ZVL6 1849 aa22.08■■□□□ 1.12
SRM-202ENST00000459997 E2F8A0AVK6 867 aa22.07■■□□□ 1.12
SRM-202ENST00000459997 PXNP49023 591 aaPredicted RBP22.07■■□□□ 1.12
SRM-202ENST00000459997 PGFP49763 221 aa22.07■■□□□ 1.12
SRM-202ENST00000459997 STIM1Q13586 685 aa22.07■■□□□ 1.12
SRM-202ENST00000459997 DHCR24Q15392 516 aa22.07■■□□□ 1.12
SRM-202ENST00000459997 GAB4Q2WGN9 574 aa22.07■■□□□ 1.12
SRM-202ENST00000459997 CBWD6Q4V339 395 aa22.07■■□□□ 1.12
SRM-202ENST00000459997 CBWD3Q5JTY5 395 aa22.07■■□□□ 1.12
SRM-202ENST00000459997 CBWD5Q5RIA9 395 aa22.07■■□□□ 1.12
SRM-202ENST00000459997 ISM2Q6H9L7 571 aa22.07■■□□□ 1.12
SRM-202ENST00000459997 FAXDC2Q96IV6 333 aa22.07■■□□□ 1.12
SRM-202ENST00000459997 CISHQ9NSE2 258 aa22.07■■□□□ 1.12
SRM-202ENST00000459997 POLR3BQ9NW08 1133 aaPredicted RBP22.07■■□□□ 1.12
SRM-202ENST00000459997 TBC1D14Q9P2M4 693 aa22.07■■□□□ 1.12
SRM-202ENST00000459997 SH3BP1Q9Y3L3 701 aa22.07■■□□□ 1.12
SRM-202ENST00000459997 HHLA1C9JL84 531 aa22.06■■□□□ 1.12
SRM-202ENST00000459997 PSMA7O14818 248 aa22.06■■□□□ 1.12
SRM-202ENST00000459997 CYP26A1O43174 497 aa22.06■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms