RNA–Protein interactions for RNA: ENST00000456331.6

PPP1R9A-208, Transcript of protein phosphatase 1 regulatory subunit 9A, human

TSL 1 (best) BASIC

Gene PPP1R9A, Length 10,090 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPP1R9A-208	ENST00000456331	OXCT2	Q9BYC2	517 aa	Predicted RBP	4.16	□□□□□ -1.74
PPP1R9A-208	ENST00000456331	WDR12	Q9GZL7	423 aa	Known RBP	4.16	□□□□□ -1.74
PPP1R9A-208	ENST00000456331	TIMMDC1	Q9NPL8	285 aa		4.16	□□□□□ -1.74
PPP1R9A-208	ENST00000456331	ING3	Q9NXR8	418 aa		4.16	□□□□□ -1.74
PPP1R9A-208	ENST00000456331	IPP	Q9Y573	584 aa		4.16	□□□□□ -1.74
PPP1R9A-208	ENST00000456331	PPP2R3B	Q9Y5P8	575 aa		4.16	□□□□□ -1.74
PPP1R9A-208	ENST00000456331	SQOR	Q9Y6N5	450 aa		4.16	□□□□□ -1.74
PPP1R9A-208	ENST00000456331		A0A087X1B8	175 aa		4.15	□□□□□ -1.74
PPP1R9A-208	ENST00000456331	CCDC162P	A2VCL2	907 aa		4.15	□□□□□ -1.74
PPP1R9A-208	ENST00000456331	SAGE2P	A6NJ88	616 aa		4.15	□□□□□ -1.74
PPP1R9A-208	ENST00000456331	WBP4	O75554	376 aa	Known RBP	4.15	□□□□□ -1.74
PPP1R9A-208	ENST00000456331	ALOX15	P16050	662 aa	Predicted RBP	4.15	□□□□□ -1.74
PPP1R9A-208	ENST00000456331	MYL12A	P19105	171 aa		4.15	□□□□□ -1.74
PPP1R9A-208	ENST00000456331	PPIB	P23284	216 aa	Known RBP	4.15	□□□□□ -1.74
PPP1R9A-208	ENST00000456331	GUCY1A2	P33402	732 aa		4.15	□□□□□ -1.74
PPP1R9A-208	ENST00000456331	CEBPA	P49715	358 aa	Predicted RBP	4.15	□□□□□ -1.74
PPP1R9A-208	ENST00000456331	RPL10A	P62906	217 aa	Known RBP	4.15	□□□□□ -1.74
PPP1R9A-208	ENST00000456331	CCDC157	Q569K6	752 aa		4.15	□□□□□ -1.74
PPP1R9A-208	ENST00000456331	C6orf10	Q5SRN2	563 aa		4.15	□□□□□ -1.74
PPP1R9A-208	ENST00000456331	HERC6	Q8IVU3	1022 aa		4.15	□□□□□ -1.74
PPP1R9A-208	ENST00000456331	C15orf40	Q8WUR7	153 aa		4.15	□□□□□ -1.74
PPP1R9A-208	ENST00000456331	HEXDC	Q8WVB3	486 aa		4.15	□□□□□ -1.74
PPP1R9A-208	ENST00000456331	PANX3	Q96QZ0	392 aa		4.15	□□□□□ -1.74
PPP1R9A-208	ENST00000456331	NPHS2	Q9NP85	383 aa		4.15	□□□□□ -1.74
PPP1R9A-208	ENST00000456331	CRYL1	Q9Y2S2	319 aa		4.15	□□□□□ -1.74
PPP1R9A-208	ENST00000456331	PNPLA6	Q8IY17	1366 aa		4.15	□□□□□ -1.74
PPP1R9A-208	ENST00000456331	PDE4DIP	Q5VU43	2346 aa		4.15	□□□□□ -1.74
PPP1R9A-208	ENST00000456331	ODC1	P11926	461 aa		4.15	□□□□□ -1.74
PPP1R9A-208	ENST00000456331	ENO3	P13929	434 aa	Predicted RBP	4.15	□□□□□ -1.74
PPP1R9A-208	ENST00000456331	PDGFRA	P16234	1089 aa		4.15	□□□□□ -1.74
PPP1R9A-208	ENST00000456331	PTPN3	P26045	913 aa		4.15	□□□□□ -1.74
PPP1R9A-208	ENST00000456331	PSMD4	P55036	377 aa	Known RBP	4.15	□□□□□ -1.74
PPP1R9A-208	ENST00000456331	AP3S2	P59780	193 aa		4.15	□□□□□ -1.74
PPP1R9A-208	ENST00000456331	PSMC6	P62333	389 aa		4.15	□□□□□ -1.74
PPP1R9A-208	ENST00000456331	TXNRD1	Q16881	649 aa		4.15	□□□□□ -1.74
PPP1R9A-208	ENST00000456331	RABL6	Q3YEC7	729 aa	Predicted RBP	4.15	□□□□□ -1.74
PPP1R9A-208	ENST00000456331	ZNF394	Q53GI3	561 aa		4.15	□□□□□ -1.74
PPP1R9A-208	ENST00000456331	STRIP1	Q5VSL9	837 aa		4.15	□□□□□ -1.74
PPP1R9A-208	ENST00000456331	SH3BP5L	Q7L8J4	393 aa		4.15	□□□□□ -1.74
PPP1R9A-208	ENST00000456331	ZNF655	Q8N720	491 aa	Predicted RBP	4.15	□□□□□ -1.74
PPP1R9A-208	ENST00000456331	AMER2	Q8N7J2	671 aa		4.15	□□□□□ -1.74
PPP1R9A-208	ENST00000456331	PIK3C3	Q8NEB9	887 aa		4.15	□□□□□ -1.74
PPP1R9A-208	ENST00000456331	HELQ	Q8TDG4	1101 aa		4.15	□□□□□ -1.74
PPP1R9A-208	ENST00000456331	AFG1L	Q8WV93	481 aa		4.15	□□□□□ -1.74
PPP1R9A-208	ENST00000456331	CRAMP1	Q96RY5	1269 aa		4.15	□□□□□ -1.74
PPP1R9A-208	ENST00000456331	MMP19	Q99542	508 aa		4.15	□□□□□ -1.74
PPP1R9A-208	ENST00000456331	BBS2	Q9BXC9	721 aa		4.15	□□□□□ -1.74
PPP1R9A-208	ENST00000456331	PUS7L	Q9H0K6	701 aa	Known RBP	4.15	□□□□□ -1.74
PPP1R9A-208	ENST00000456331	SERHL2	Q9H4I8	314 aa		4.15	□□□□□ -1.74
PPP1R9A-208	ENST00000456331	SERHL	Q9NQF3	203 aa		4.15	□□□□□ -1.74
PPP1R9A-208	ENST00000456331	HSPBP1	Q9NZL4	362 aa		4.15	□□□□□ -1.74
PPP1R9A-208	ENST00000456331	CD274	Q9NZQ7	290 aa		4.15	□□□□□ -1.74
PPP1R9A-208	ENST00000456331	CLCA2	Q9UQC9	943 aa		4.15	□□□□□ -1.74
PPP1R9A-208	ENST00000456331	KIT	P10721	976 aa		4.15	□□□□□ -1.74
PPP1R9A-208	ENST00000456331	COIL	P38432	576 aa	Predicted RBP	4.15	□□□□□ -1.74
PPP1R9A-208	ENST00000456331	NAMPT	P43490	491 aa		4.15	□□□□□ -1.74
PPP1R9A-208	ENST00000456331	KDSR	Q06136	332 aa		4.15	□□□□□ -1.74
PPP1R9A-208	ENST00000456331	SNRNP35	Q16560	246 aa	Known RBP	4.15	□□□□□ -1.74
PPP1R9A-208	ENST00000456331	INO80D	Q53TQ3	878 aa	Predicted RBP	4.15	□□□□□ -1.74
PPP1R9A-208	ENST00000456331	DENND1B	Q6P3S1	775 aa		4.15	□□□□□ -1.74
PPP1R9A-208	ENST00000456331	ZBTB33	Q86T24	672 aa		4.15	□□□□□ -1.74
PPP1R9A-208	ENST00000456331	RP1L1	Q8IWN7	2480 aa	Predicted RBP	4.15	□□□□□ -1.74
PPP1R9A-208	ENST00000456331	LEMD2	Q8NC56	503 aa		4.15	□□□□□ -1.74
PPP1R9A-208	ENST00000456331	PDPR	Q8NCN5	879 aa		4.15	□□□□□ -1.74
PPP1R9A-208	ENST00000456331	PPP1R36	Q96LQ0	422 aa		4.15	□□□□□ -1.74
PPP1R9A-208	ENST00000456331	CHCHD6	Q9BRQ6	235 aa		4.15	□□□□□ -1.74
PPP1R9A-208	ENST00000456331	DDX47	Q9H0S4	455 aa	Known RBP	4.15	□□□□□ -1.74
PPP1R9A-208	ENST00000456331	VTA1	Q9NP79	307 aa		4.15	□□□□□ -1.74
PPP1R9A-208	ENST00000456331	DNAAF2	Q9NVR5	837 aa	Known RBP	4.15	□□□□□ -1.74
PPP1R9A-208	ENST00000456331	EFR3B	Q9Y2G0	817 aa		4.15	□□□□□ -1.74
PPP1R9A-208	ENST00000456331	MYRF	Q9Y2G1	1151 aa		4.15	□□□□□ -1.74
PPP1R9A-208	ENST00000456331	DDX52	Q9Y2R4	599 aa	Known RBP eCLIP	4.15	□□□□□ -1.74
PPP1R9A-208	ENST00000456331	MBD5	Q9P267	1494 aa		4.15	□□□□□ -1.74
PPP1R9A-208	ENST00000456331	RNASEH1	O60930	286 aa	Known RBP	4.15	□□□□□ -1.74
PPP1R9A-208	ENST00000456331	ZMYND10	O75800	440 aa		4.15	□□□□□ -1.74
PPP1R9A-208	ENST00000456331	FYN	P06241	537 aa		4.15	□□□□□ -1.74
PPP1R9A-208	ENST00000456331	PAICS	P22234	425 aa	Known RBP	4.15	□□□□□ -1.74
PPP1R9A-208	ENST00000456331	GALC	P54803	685 aa		4.15	□□□□□ -1.74
PPP1R9A-208	ENST00000456331	ALDH18A1	P54886	795 aa	Known RBP	4.15	□□□□□ -1.74
PPP1R9A-208	ENST00000456331	COX10	Q12887	443 aa		4.15	□□□□□ -1.74
PPP1R9A-208	ENST00000456331	E2F4	Q16254	413 aa		4.15	□□□□□ -1.74
PPP1R9A-208	ENST00000456331	NDUFAF6	Q330K2	333 aa		4.15	□□□□□ -1.74
PPP1R9A-208	ENST00000456331	KCNT1	Q5JUK3	1230 aa		4.15	□□□□□ -1.74
PPP1R9A-208	ENST00000456331	TTC23	Q5W5X9	447 aa		4.15	□□□□□ -1.74
PPP1R9A-208	ENST00000456331	KY	Q8NBH2	561 aa		4.15	□□□□□ -1.74
PPP1R9A-208	ENST00000456331	RORB	Q92753	470 aa		4.15	□□□□□ -1.74
PPP1R9A-208	ENST00000456331	TMA16	Q96EY4	203 aa	Known RBP	4.15	□□□□□ -1.74
PPP1R9A-208	ENST00000456331	IL17RA	Q96F46	866 aa		4.15	□□□□□ -1.74
PPP1R9A-208	ENST00000456331	KIF12	Q96FN5	646 aa		4.15	□□□□□ -1.74
PPP1R9A-208	ENST00000456331	ZFYVE19	Q96K21	471 aa		4.15	□□□□□ -1.74
PPP1R9A-208	ENST00000456331	APOL6	Q9BWW8	343 aa		4.15	□□□□□ -1.74
PPP1R9A-208	ENST00000456331	CYP4F11	Q9HBI6	524 aa		4.15	□□□□□ -1.74
PPP1R9A-208	ENST00000456331	LATS2	Q9NRM7	1088 aa		4.15	□□□□□ -1.74
PPP1R9A-208	ENST00000456331	UBQLN1	Q9UMX0	589 aa	Known RBP	4.15	□□□□□ -1.74
PPP1R9A-208	ENST00000456331	SLIT1	O75093	1534 aa		4.15	□□□□□ -1.74
PPP1R9A-208	ENST00000456331	CXCR2	P25025	360 aa		4.15	□□□□□ -1.75
PPP1R9A-208	ENST00000456331	PTX3	P26022	381 aa	Predicted RBP	4.15	□□□□□ -1.75
PPP1R9A-208	ENST00000456331	AXL	P30530	894 aa		4.15	□□□□□ -1.75
PPP1R9A-208	ENST00000456331	FAU	P35544	74 aa	Known RBP	4.15	□□□□□ -1.75
PPP1R9A-208	ENST00000456331	NPTX2	P47972	431 aa		4.15	□□□□□ -1.75

Retrieved 100 of 20,778 RNA–protein pairs in 116.1 ms