RNA–Protein interactions for RNA: ENST00000455383.5

MSH6-206, Transcript of mutS homolog 6, humanhuman

TSL 5

Gene MSH6, Length 578 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-206ENST00000455383 HPS3Q969F9 1004 aa19.88■□□□□ 0.77
MSH6-206ENST00000455383 SCNM1Q9BWG6 230 aa19.88■□□□□ 0.77
MSH6-206ENST00000455383 B3GNT5Q9BYG0 378 aa19.88■□□□□ 0.77
MSH6-206ENST00000455383 ZNF518BQ9C0D4 1074 aa19.88■□□□□ 0.77
MSH6-206ENST00000455383 SNX25Q9H3E2 840 aa19.88■□□□□ 0.77
MSH6-206ENST00000455383 DPEP3Q9H4B8 488 aa19.88■□□□□ 0.77
MSH6-206ENST00000455383 MYOFQ9NZM1 2061 aa19.87■□□□□ 0.77
MSH6-206ENST00000455383 UPK3BL1B0FP48 263 aa19.87■□□□□ 0.77
MSH6-206ENST00000455383 UPK3BL2E5RIL1 263 aa19.87■□□□□ 0.77
MSH6-206ENST00000455383 EIF3DO15371 548 aaKnown RBP eCLIP19.87■□□□□ 0.77
MSH6-206ENST00000455383 TGFB1I1O43294 461 aa19.87■□□□□ 0.77
MSH6-206ENST00000455383 ABL1P00519 1130 aa19.87■□□□□ 0.77
MSH6-206ENST00000455383 MBL2P11226 248 aaPredicted RBP19.87■□□□□ 0.77
MSH6-206ENST00000455383 ENGP17813 658 aa19.87■□□□□ 0.77
MSH6-206ENST00000455383 CEBPZQ03701 1054 aaKnown RBP19.87■□□□□ 0.77
MSH6-206ENST00000455383 BYSLQ13895 437 aaKnown RBP19.87■□□□□ 0.77
MSH6-206ENST00000455383 PSMD6Q15008 389 aa19.87■□□□□ 0.77
MSH6-206ENST00000455383 SNRNP35Q16560 246 aaKnown RBP19.87■□□□□ 0.77
MSH6-206ENST00000455383 LY6G5CQ5SRR4 150 aa19.87■□□□□ 0.77
MSH6-206ENST00000455383 SNX30Q5VWJ9 437 aa19.87■□□□□ 0.77
MSH6-206ENST00000455383 NUP93Q8N1F7 819 aa19.87■□□□□ 0.77
MSH6-206ENST00000455383 PDZD8Q8NEN9 1154 aa19.87■□□□□ 0.77
MSH6-206ENST00000455383 OTUB2Q96DC9 234 aa19.87■□□□□ 0.77
MSH6-206ENST00000455383 USP28Q96RU2 1077 aa19.87■□□□□ 0.77
MSH6-206ENST00000455383 NUSAP1Q9BXS6 441 aaKnown RBP19.87■□□□□ 0.77
MSH6-206ENST00000455383 GZF1Q9H116 711 aaPredicted RBP19.87■□□□□ 0.77
MSH6-206ENST00000455383 TNMDQ9H2S6 317 aa19.87■□□□□ 0.77
MSH6-206ENST00000455383 KBTBD4Q9NVX7 518 aa19.87■□□□□ 0.77
MSH6-206ENST00000455383 IL37Q9NZH6 218 aa19.87■□□□□ 0.77
MSH6-206ENST00000455383 PILRBQ9UKJ0 227 aa19.87■□□□□ 0.77
MSH6-206ENST00000455383 ZZEF1O43149 2961 aa19.86■□□□□ 0.77
MSH6-206ENST00000455383 HOXC11O43248 304 aaPredicted RBP19.86■□□□□ 0.77
MSH6-206ENST00000455383 COCHO43405 550 aa19.86■□□□□ 0.77
MSH6-206ENST00000455383 YWHAQP27348 245 aa19.86■□□□□ 0.77
MSH6-206ENST00000455383 HOXD12P35452 270 aa19.86■□□□□ 0.77
MSH6-206ENST00000455383 GAD2Q05329 585 aa19.86■□□□□ 0.77
MSH6-206ENST00000455383 KDSRQ06136 332 aa19.86■□□□□ 0.77
MSH6-206ENST00000455383 SEMA3BQ13214 749 aa19.86■□□□□ 0.77
MSH6-206ENST00000455383 UAP1L1Q3KQV9 507 aa19.86■□□□□ 0.77
MSH6-206ENST00000455383 LYSMD4Q5XG99 296 aa19.86■□□□□ 0.77
MSH6-206ENST00000455383 PIP4P1Q86T03 277 aa19.86■□□□□ 0.77
MSH6-206ENST00000455383 CGRRF1Q99675 332 aa19.86■□□□□ 0.77
MSH6-206ENST00000455383 XYLT2Q9H1B5 865 aa19.86■□□□□ 0.77
MSH6-206ENST00000455383 AGPAT3Q9NRZ7 376 aa19.86■□□□□ 0.77
MSH6-206ENST00000455383 HCN2Q9UL51 889 aa19.86■□□□□ 0.77
MSH6-206ENST00000455383 IGF2RP11717 2491 aa19.86■□□□□ 0.77
MSH6-206ENST00000455383 SPEGQ15772 3267 aa19.86■□□□□ 0.77
MSH6-206ENST00000455383 TCRBV21S2A2A0A5A6 115 aa19.85■□□□□ 0.77
MSH6-206ENST00000455383 CLDN5O00501 218 aa19.85■□□□□ 0.77
MSH6-206ENST00000455383 MAP3K13O43283 966 aa19.85■□□□□ 0.77
MSH6-206ENST00000455383 RTN3O95197 1032 aaPredicted RBP19.85■□□□□ 0.77
MSH6-206ENST00000455383 DLATP10515 647 aaKnown RBP19.85■□□□□ 0.77
MSH6-206ENST00000455383 SYT1P21579 422 aa19.85■□□□□ 0.77
MSH6-206ENST00000455383 CYP24A1Q07973 514 aa19.85■□□□□ 0.77
MSH6-206ENST00000455383 E2F4Q16254 413 aa19.85■□□□□ 0.77
MSH6-206ENST00000455383 WDR72Q3MJ13 1102 aa19.85■□□□□ 0.77
MSH6-206ENST00000455383 CNNM4Q6P4Q7 775 aa19.85■□□□□ 0.77
MSH6-206ENST00000455383 ARMCX6Q7L4S7 300 aa19.85■□□□□ 0.77
MSH6-206ENST00000455383 PDILTQ8N807 584 aa19.85■□□□□ 0.77
MSH6-206ENST00000455383 B3GALNT2Q8NCR0 500 aa19.85■□□□□ 0.77
MSH6-206ENST00000455383 HMGB4Q8WW32 186 aa19.85■□□□□ 0.77
MSH6-206ENST00000455383 ZNF516Q92618 1163 aa19.85■□□□□ 0.77
MSH6-206ENST00000455383 TRIM9Q9C026 710 aa19.85■□□□□ 0.77
MSH6-206ENST00000455383 LRRC27Q9C0I9 530 aa19.85■□□□□ 0.77
MSH6-206ENST00000455383 ZDHHC4Q9NPG8 344 aa19.85■□□□□ 0.77
MSH6-206ENST00000455383 BCCIPQ9P287 314 aaKnown RBP eCLIP19.85■□□□□ 0.77
MSH6-206ENST00000455383 PCNX2A6NKB5 2137 aa19.84■□□□□ 0.77
MSH6-206ENST00000455383 FAM92AA1XBS5 289 aa19.84■□□□□ 0.77
MSH6-206ENST00000455383 TULP3O75386 442 aa19.84■□□□□ 0.77
MSH6-206ENST00000455383 ZDHHC11BP0C7U3 371 aa19.84■□□□□ 0.77
MSH6-206ENST00000455383 TNNI1P19237 187 aa19.84■□□□□ 0.77
MSH6-206ENST00000455383 ITPKAP23677 461 aa19.84■□□□□ 0.77
MSH6-206ENST00000455383 TUBP50607 506 aa19.84■□□□□ 0.77
MSH6-206ENST00000455383 SNRPFP62306 86 aaKnown RBP19.84■□□□□ 0.77
MSH6-206ENST00000455383 TNNC1P63316 161 aa19.84■□□□□ 0.77
MSH6-206ENST00000455383 PAQR9Q6ZVX9 377 aa19.84■□□□□ 0.77
MSH6-206ENST00000455383 RDH13Q8NBN7 331 aa19.84■□□□□ 0.77
MSH6-206ENST00000455383 FBXO32Q969P5 355 aa19.84■□□□□ 0.77
MSH6-206ENST00000455383 SLC32A1Q9H598 525 aa19.84■□□□□ 0.77
MSH6-206ENST00000455383 VRTNQ9H8Y1 702 aa19.84■□□□□ 0.77
MSH6-206ENST00000455383 STARD13Q9Y3M8 1113 aa19.84■□□□□ 0.77
MSH6-206ENST00000455383 NEUROG3Q9Y4Z2 214 aa19.84■□□□□ 0.77
MSH6-206ENST00000455383 CACNA1GO43497 2377 aa19.84■□□□□ 0.77
MSH6-206ENST00000455383 MYO18AQ92614 2054 aaKnown RBP19.83■□□□□ 0.77
MSH6-206ENST00000455383 A8MXQ7 604 aa19.83■□□□□ 0.77
MSH6-206ENST00000455383 ATICP31939 592 aa19.83■□□□□ 0.77
MSH6-206ENST00000455383 PI4KAP42356 2102 aa19.83■□□□□ 0.77
MSH6-206ENST00000455383 MAPK8P45983 427 aa19.83■□□□□ 0.77
MSH6-206ENST00000455383 NASPP49321 788 aaPredicted RBP19.83■□□□□ 0.77
MSH6-206ENST00000455383 MYL6P60660 151 aa19.83■□□□□ 0.77
MSH6-206ENST00000455383 IFRD2Q12894 506 aaPredicted RBP19.83■□□□□ 0.77
MSH6-206ENST00000455383 HECTD3Q5T447 861 aa19.83■□□□□ 0.77
MSH6-206ENST00000455383 BBS7Q8IWZ6 715 aa19.83■□□□□ 0.77
MSH6-206ENST00000455383 TERB1Q8NA31 727 aa19.83■□□□□ 0.77
MSH6-206ENST00000455383 SCAMP5Q8TAC9 235 aa19.83■□□□□ 0.77
MSH6-206ENST00000455383 CCDC127Q96BQ5 260 aa19.83■□□□□ 0.77
MSH6-206ENST00000455383 KCNK16Q96T55 309 aa19.83■□□□□ 0.77
MSH6-206ENST00000455383 UPF2Q9HAU5 1272 aaKnown RBP19.83■□□□□ 0.77
MSH6-206ENST00000455383 CAPN10Q9HC96 672 aa19.83■□□□□ 0.77
MSH6-206ENST00000455383 CD248Q9HCU0 757 aa19.83■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms