RNA–Protein interactions for RNA: ENST00000453858.1

SBDSP1-204, Transcript of SBDS, ribosome maturation factor pseudogene 1, humanhuman

BASIC

Gene SBDSP1, Length 737 nt, Biotype transcribed unprocessed pseudogene, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDSP1-204ENST00000453858 Q8N3U1 123 aa5.87□□□□□ -1.47
SBDSP1-204ENST00000453858 C2CD4AQ8NCU7 369 aaPredicted RBP5.87□□□□□ -1.47
SBDSP1-204ENST00000453858 SHKBP1Q8TBC3 707 aa5.87□□□□□ -1.47
SBDSP1-204ENST00000453858 GPRASP2Q96D09 838 aa5.87□□□□□ -1.47
SBDSP1-204ENST00000453858 PGBD4Q96DM1 585 aa5.87□□□□□ -1.47
SBDSP1-204ENST00000453858 MYRFLQ96LU7 910 aa5.87□□□□□ -1.47
SBDSP1-204ENST00000453858 TTC14Q96N46 770 aa5.87□□□□□ -1.47
SBDSP1-204ENST00000453858 FANCD2OSQ96PS1 177 aa5.87□□□□□ -1.47
SBDSP1-204ENST00000453858 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP5.87□□□□□ -1.47
SBDSP1-204ENST00000453858 SSBP4Q9BWG4 385 aaPredicted RBP5.87□□□□□ -1.47
SBDSP1-204ENST00000453858 AMNQ9BXJ7 453 aa5.87□□□□□ -1.47
SBDSP1-204ENST00000453858 GPR88Q9GZN0 384 aa5.87□□□□□ -1.47
SBDSP1-204ENST00000453858 AZI2Q9H6S1 392 aa5.87□□□□□ -1.47
SBDSP1-204ENST00000453858 RSAD1Q9HA92 442 aa5.87□□□□□ -1.47
SBDSP1-204ENST00000453858 OBP2AQ9NY56 170 aa5.87□□□□□ -1.47
SBDSP1-204ENST00000453858 CEP72Q9P209 647 aa5.87□□□□□ -1.47
SBDSP1-204ENST00000453858 AP4E1Q9UPM8 1137 aa5.87□□□□□ -1.47
SBDSP1-204ENST00000453858 PLAAQ9Y263 795 aa5.87□□□□□ -1.47
SBDSP1-204ENST00000453858 PCDHGB7Q9Y5F8 929 aa5.87□□□□□ -1.47
SBDSP1-204ENST00000453858 KIAA1549LQ6ZVL6 1849 aa5.87□□□□□ -1.47
SBDSP1-204ENST00000453858 CNTNAP2Q9UHC6 1331 aa5.86□□□□□ -1.47
SBDSP1-204ENST00000453858 A1L4Q6 167 aa5.86□□□□□ -1.47
SBDSP1-204ENST00000453858 K7EQS6 105 aa5.86□□□□□ -1.47
SBDSP1-204ENST00000453858 AP5Z1O43299 807 aa5.86□□□□□ -1.47
SBDSP1-204ENST00000453858 RANBP6O60518 1105 aaKnown RBP5.86□□□□□ -1.47
SBDSP1-204ENST00000453858 RECQL4O94761 1208 aa5.86□□□□□ -1.47
SBDSP1-204ENST00000453858 SEC24AO95486 1093 aa5.86□□□□□ -1.47
SBDSP1-204ENST00000453858 C1SP09871 688 aa5.86□□□□□ -1.47
SBDSP1-204ENST00000453858 SFTPCP11686 197 aa5.86□□□□□ -1.47
SBDSP1-204ENST00000453858 U2AF2P26368 475 aaKnown RBP eCLIP5.86□□□□□ -1.47
SBDSP1-204ENST00000453858 HOXA11P31270 313 aaPredicted RBP5.86□□□□□ -1.47
SBDSP1-204ENST00000453858 HNF1BP35680 557 aa5.86□□□□□ -1.47
SBDSP1-204ENST00000453858 AFMP43652 599 aa5.86□□□□□ -1.47
SBDSP1-204ENST00000453858 PREPP48147 710 aa5.86□□□□□ -1.47
SBDSP1-204ENST00000453858 ZNF165P49910 485 aa5.86□□□□□ -1.47
SBDSP1-204ENST00000453858 RAB27AP51159 221 aa5.86□□□□□ -1.47
SBDSP1-204ENST00000453858 INHBCP55103 352 aa5.86□□□□□ -1.47
SBDSP1-204ENST00000453858 RUNX3Q13761 415 aa5.86□□□□□ -1.47
SBDSP1-204ENST00000453858 MAP7Q14244 749 aa5.86□□□□□ -1.47
SBDSP1-204ENST00000453858 NCAPHQ15003 741 aa5.86□□□□□ -1.47
SBDSP1-204ENST00000453858 SLC35G1Q2M3R5 365 aa5.86□□□□□ -1.47
SBDSP1-204ENST00000453858 HLA-BQ31612 363 aa5.86□□□□□ -1.47
SBDSP1-204ENST00000453858 WIPI1Q5MNZ9 446 aaPredicted RBP5.86□□□□□ -1.47
SBDSP1-204ENST00000453858 STXBP5Q5T5C0 1151 aa5.86□□□□□ -1.47
SBDSP1-204ENST00000453858 ABHD15Q6UXT9 468 aa5.86□□□□□ -1.47
SBDSP1-204ENST00000453858 PDZD4Q76G19 769 aaPredicted RBP5.86□□□□□ -1.47
SBDSP1-204ENST00000453858 SLITRK4Q8IW52 837 aa5.86□□□□□ -1.47
SBDSP1-204ENST00000453858 METTL13Q8N6R0 699 aa5.86□□□□□ -1.47
SBDSP1-204ENST00000453858 PI4K2BQ8TCG2 481 aa5.86□□□□□ -1.47
SBDSP1-204ENST00000453858 ZNF507Q8TCN5 953 aa5.86□□□□□ -1.47
SBDSP1-204ENST00000453858 KCNE4Q8WWG9 221 aa5.86□□□□□ -1.47
SBDSP1-204ENST00000453858 RFFLQ8WZ73 363 aa5.86□□□□□ -1.47
SBDSP1-204ENST00000453858 RABGGTAQ92696 567 aa5.86□□□□□ -1.47
SBDSP1-204ENST00000453858 NKD1Q969G9 470 aa5.86□□□□□ -1.47
SBDSP1-204ENST00000453858 UTP4Q969X6 686 aaKnown RBP5.86□□□□□ -1.47
SBDSP1-204ENST00000453858 MIB2Q96AX9 1013 aa5.86□□□□□ -1.47
SBDSP1-204ENST00000453858 PLPPR2Q96GM1 343 aa5.86□□□□□ -1.47
SBDSP1-204ENST00000453858 SEC16BQ96JE7 1060 aa5.86□□□□□ -1.47
SBDSP1-204ENST00000453858 MEGF10Q96KG7 1140 aa5.86□□□□□ -1.47
SBDSP1-204ENST00000453858 P2RY13Q9BPV8 354 aa5.86□□□□□ -1.47
SBDSP1-204ENST00000453858 PAAF1Q9BRP4 392 aa5.86□□□□□ -1.47
SBDSP1-204ENST00000453858 SLC25A18Q9H1K4 315 aa5.86□□□□□ -1.47
SBDSP1-204ENST00000453858 FAM124BQ9H5Z6 455 aaPredicted RBP5.86□□□□□ -1.47
SBDSP1-204ENST00000453858 GAREM1Q9H706 876 aa5.86□□□□□ -1.47
SBDSP1-204ENST00000453858 VAT1LQ9HCJ6 419 aa5.86□□□□□ -1.47
SBDSP1-204ENST00000453858 DISC1Q9NRI5 854 aa5.86□□□□□ -1.47
SBDSP1-204ENST00000453858 GKN1Q9NS71 199 aa5.86□□□□□ -1.47
SBDSP1-204ENST00000453858 NOB1Q9ULX3 412 aaKnown RBP5.86□□□□□ -1.47
SBDSP1-204ENST00000453858 UBIAD1Q9Y5Z9 338 aa5.86□□□□□ -1.47
SBDSP1-204ENST00000453858 ARID1BQ8NFD5 2236 aaPredicted RBP5.86□□□□□ -1.47
SBDSP1-204ENST00000453858 GPAA1O43292 621 aa5.85□□□□□ -1.47
SBDSP1-204ENST00000453858 SLC3A2P08195 630 aaKnown RBP5.85□□□□□ -1.47
SBDSP1-204ENST00000453858 CDK4P11802 303 aa5.85□□□□□ -1.47
SBDSP1-204ENST00000453858 IMPDH2P12268 514 aa5.85□□□□□ -1.47
SBDSP1-204ENST00000453858 DRD2P14416 443 aa5.85□□□□□ -1.47
SBDSP1-204ENST00000453858 GNAT2P19087 354 aa5.85□□□□□ -1.47
SBDSP1-204ENST00000453858 IGFBP6P24592 240 aaPredicted RBP5.85□□□□□ -1.47
SBDSP1-204ENST00000453858 ERVPABLB-1P60509 514 aa5.85□□□□□ -1.47
SBDSP1-204ENST00000453858 INPP5AQ14642 412 aa5.85□□□□□ -1.47
SBDSP1-204ENST00000453858 PTPAQ15257 358 aa5.85□□□□□ -1.47
SBDSP1-204ENST00000453858 ALDH1L2Q3SY69 923 aa5.85□□□□□ -1.47
SBDSP1-204ENST00000453858 CCDC157Q569K6 752 aa5.85□□□□□ -1.47
SBDSP1-204ENST00000453858 CYP4A22Q5TCH4 519 aa5.85□□□□□ -1.47
SBDSP1-204ENST00000453858 HES3Q5TGS1 186 aa5.85□□□□□ -1.47
SBDSP1-204ENST00000453858 FAM171A1Q5VUB5 890 aa5.85□□□□□ -1.47
SBDSP1-204ENST00000453858 LMBRD2Q68DH5 695 aaPredicted RBP5.85□□□□□ -1.47
SBDSP1-204ENST00000453858 EFCAB12Q6NXP0 572 aa5.85□□□□□ -1.47
SBDSP1-204ENST00000453858 LRFN4Q6PJG9 635 aa5.85□□□□□ -1.47
SBDSP1-204ENST00000453858 SPNS3Q6ZMD2 512 aa5.85□□□□□ -1.47
SBDSP1-204ENST00000453858 MAMDC2Q7Z304 686 aaPredicted RBP5.85□□□□□ -1.47
SBDSP1-204ENST00000453858 HAUS6Q7Z4H7 955 aa5.85□□□□□ -1.47
SBDSP1-204ENST00000453858 REC114Q7Z4M0 266 aa5.85□□□□□ -1.47
SBDSP1-204ENST00000453858 NLRX1Q86UT6 975 aa5.85□□□□□ -1.47
SBDSP1-204ENST00000453858 TCEAL8Q8IYN2 117 aa5.85□□□□□ -1.47
SBDSP1-204ENST00000453858 DCBLD1Q8N8Z6 715 aa5.85□□□□□ -1.47
SBDSP1-204ENST00000453858 TRIML1Q8N9V2 468 aa5.85□□□□□ -1.47
SBDSP1-204ENST00000453858 ZNF461Q8TAF7 563 aa5.85□□□□□ -1.47
SBDSP1-204ENST00000453858 SMARCC2Q8TAQ2 1214 aa5.85□□□□□ -1.47
SBDSP1-204ENST00000453858 ZNF564Q8TBZ8 553 aaPredicted RBP5.85□□□□□ -1.47
SBDSP1-204ENST00000453858 SSC4DQ8WTU2 575 aa5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms