RNA–Protein interactions for RNA: ENST00000452013.5

COL8A1-203, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 2

Gene COL8A1, Length 659 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-203ENST00000452013 NACA2Q9H009 215 aa9.36□□□□□ -0.91
COL8A1-203ENST00000452013 CBX8Q9HC52 389 aa9.36□□□□□ -0.91
COL8A1-203ENST00000452013 TRPV5Q9NQA5 729 aa9.36□□□□□ -0.91
COL8A1-203ENST00000452013 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.36□□□□□ -0.91
COL8A1-203ENST00000452013 USP3Q9Y6I4 520 aa9.36□□□□□ -0.91
COL8A1-203ENST00000452013 MYO7AQ13402 2215 aa9.35□□□□□ -0.91
COL8A1-203ENST00000452013 C2orf78A6NCI8 922 aa9.35□□□□□ -0.91
COL8A1-203ENST00000452013 PRR33A8MZF0 331 aa9.35□□□□□ -0.91
COL8A1-203ENST00000452013 M0QYV0 167 aa9.35□□□□□ -0.91
COL8A1-203ENST00000452013 STK25O00506 426 aa9.35□□□□□ -0.91
COL8A1-203ENST00000452013 CYP26A1O43174 497 aa9.35□□□□□ -0.91
COL8A1-203ENST00000452013 TADA3O75528 432 aa9.35□□□□□ -0.91
COL8A1-203ENST00000452013 ZBED1O96006 694 aa9.35□□□□□ -0.91
COL8A1-203ENST00000452013 ZDHHC11BP0C7U3 371 aa9.35□□□□□ -0.91
COL8A1-203ENST00000452013 ATP1A3P13637 1013 aa9.35□□□□□ -0.91
COL8A1-203ENST00000452013 BRD2P25440 801 aaKnown RBP9.35□□□□□ -0.91
COL8A1-203ENST00000452013 KRT9P35527 623 aa9.35□□□□□ -0.91
COL8A1-203ENST00000452013 ATP5C1P36542 298 aaKnown RBP9.35□□□□□ -0.91
COL8A1-203ENST00000452013 ACADSBP45954 432 aa9.35□□□□□ -0.91
COL8A1-203ENST00000452013 PLA2G4AP47712 749 aa9.35□□□□□ -0.91
COL8A1-203ENST00000452013 TUBP50607 506 aa9.35□□□□□ -0.91
COL8A1-203ENST00000452013 TKTL1P51854 596 aa9.35□□□□□ -0.91
COL8A1-203ENST00000452013 SNX16P57768 344 aa9.35□□□□□ -0.91
COL8A1-203ENST00000452013 SLC7A9P82251 487 aa9.35□□□□□ -0.91
COL8A1-203ENST00000452013 PLCB2Q00722 1185 aa9.35□□□□□ -0.91
COL8A1-203ENST00000452013 APBA1Q02410 837 aa9.35□□□□□ -0.91
COL8A1-203ENST00000452013 PRKCQQ04759 706 aa9.35□□□□□ -0.91
COL8A1-203ENST00000452013 FCHO2Q0JRZ9 810 aa9.35□□□□□ -0.91
COL8A1-203ENST00000452013 GRM2Q14416 872 aa9.35□□□□□ -0.91
COL8A1-203ENST00000452013 PDCD11Q14690 1871 aaKnown RBP9.35□□□□□ -0.91
COL8A1-203ENST00000452013 DRAP1Q14919 205 aaPredicted RBP9.35□□□□□ -0.91
COL8A1-203ENST00000452013 SYCP1Q15431 976 aa9.35□□□□□ -0.91
COL8A1-203ENST00000452013 SLC44A4Q53GD3 710 aa9.35□□□□□ -0.91
COL8A1-203ENST00000452013 RAB41Q5JT25 222 aa9.35□□□□□ -0.91
COL8A1-203ENST00000452013 DPY19L2P1Q6NXN4 242 aa9.35□□□□□ -0.91
COL8A1-203ENST00000452013 CCDC186Q7Z3E2 898 aa9.35□□□□□ -0.91
COL8A1-203ENST00000452013 DDX42Q86XP3 938 aaKnown RBP eCLIP9.35□□□□□ -0.91
COL8A1-203ENST00000452013 FAM71AQ8IYT1 594 aa9.35□□□□□ -0.91
COL8A1-203ENST00000452013 SIX6OS1Q8N1H7 587 aa9.35□□□□□ -0.91
COL8A1-203ENST00000452013 ZNF276Q8N554 614 aa9.35□□□□□ -0.91
COL8A1-203ENST00000452013 KIAA1958Q8N8K9 716 aa9.35□□□□□ -0.91
COL8A1-203ENST00000452013 CSGALNACT1Q8TDX6 532 aa9.35□□□□□ -0.91
COL8A1-203ENST00000452013 STK32AQ8WU08 396 aa9.35□□□□□ -0.91
COL8A1-203ENST00000452013 SLC35F5Q8WV83 523 aa9.35□□□□□ -0.91
COL8A1-203ENST00000452013 DNASE1L2Q92874 299 aa9.35□□□□□ -0.91
COL8A1-203ENST00000452013 USP13Q92995 863 aaPredicted RBP9.35□□□□□ -0.91
COL8A1-203ENST00000452013 ERGIC2Q96RQ1 377 aa9.35□□□□□ -0.91
COL8A1-203ENST00000452013 CDK5RAP1Q96SZ6 601 aaKnown RBP9.35□□□□□ -0.91
COL8A1-203ENST00000452013 RBSNQ9H1K0 784 aa9.35□□□□□ -0.91
COL8A1-203ENST00000452013 HSD3B7Q9H2F3 369 aa9.35□□□□□ -0.91
COL8A1-203ENST00000452013 PDCL3Q9H2J4 239 aa9.35□□□□□ -0.91
COL8A1-203ENST00000452013 MFSD1Q9H3U5 465 aa9.35□□□□□ -0.91
COL8A1-203ENST00000452013 CLIC5Q9NZA1 410 aa9.35□□□□□ -0.91
COL8A1-203ENST00000452013 GMIPQ9P107 970 aa9.35□□□□□ -0.91
COL8A1-203ENST00000452013 ARHGAP26Q9UNA1 814 aa9.35□□□□□ -0.91
COL8A1-203ENST00000452013 VWA8A3KMH1 1905 aa9.35□□□□□ -0.91
COL8A1-203ENST00000452013 ANK1P16157 1881 aa9.34□□□□□ -0.91
COL8A1-203ENST00000452013 OAS1P00973 400 aaKnown RBP9.34□□□□□ -0.91
COL8A1-203ENST00000452013 CCDC172P0C7W6 258 aa9.34□□□□□ -0.91
COL8A1-203ENST00000452013 MBL2P11226 248 aaPredicted RBP9.34□□□□□ -0.91
COL8A1-203ENST00000452013 RARGP13631 454 aa9.34□□□□□ -0.91
COL8A1-203ENST00000452013 GLULP15104 373 aa9.34□□□□□ -0.91
COL8A1-203ENST00000452013 TCF3P15923 654 aa9.34□□□□□ -0.91
COL8A1-203ENST00000452013 STAT1P42224 750 aa9.34□□□□□ -0.91
COL8A1-203ENST00000452013 GPD2P43304 727 aa9.34□□□□□ -0.91
COL8A1-203ENST00000452013 MLLT6P55198 1093 aaPredicted RBP9.34□□□□□ -0.91
COL8A1-203ENST00000452013 POLR2FP61218 127 aaKnown RBP9.34□□□□□ -0.91
COL8A1-203ENST00000452013 AMPD2Q01433 879 aa9.34□□□□□ -0.91
COL8A1-203ENST00000452013 NR1H3Q13133 447 aa9.34□□□□□ -0.91
COL8A1-203ENST00000452013 PDGFRLQ15198 375 aa9.34□□□□□ -0.91
COL8A1-203ENST00000452013 PKDCCQ504Y2 493 aa9.34□□□□□ -0.91
COL8A1-203ENST00000452013 PM20D1Q6GTS8 502 aa9.34□□□□□ -0.91
COL8A1-203ENST00000452013 APTXQ7Z2E3 356 aaKnown RBP9.34□□□□□ -0.91
COL8A1-203ENST00000452013 GPRIN1Q7Z2K8 1008 aa9.34□□□□□ -0.91
COL8A1-203ENST00000452013 CACNA2D4Q7Z3S7 1137 aa9.34□□□□□ -0.91
COL8A1-203ENST00000452013 LUZP1Q86V48 1076 aa9.34□□□□□ -0.91
COL8A1-203ENST00000452013 FMNL3Q8IVF7 1028 aa9.34□□□□□ -0.91
COL8A1-203ENST00000452013 SIX5Q8N196 739 aa9.34□□□□□ -0.91
COL8A1-203ENST00000452013 SCML4Q8N228 414 aa9.34□□□□□ -0.91
COL8A1-203ENST00000452013 GOLGA1Q92805 767 aa9.34□□□□□ -0.91
COL8A1-203ENST00000452013 SECISBP2LQ93073 1101 aaKnown RBP9.34□□□□□ -0.91
COL8A1-203ENST00000452013 RSPRY1Q96DX4 576 aa9.34□□□□□ -0.91
COL8A1-203ENST00000452013 ASIC4Q96FT7 647 aa9.34□□□□□ -0.91
COL8A1-203ENST00000452013 NOX5Q96PH1 765 aa9.34□□□□□ -0.91
COL8A1-203ENST00000452013 SPAG5Q96R06 1193 aa9.34□□□□□ -0.91
COL8A1-203ENST00000452013 SLC22A12Q96S37 553 aa9.34□□□□□ -0.91
COL8A1-203ENST00000452013 NELL2Q99435 816 aa9.34□□□□□ -0.91
COL8A1-203ENST00000452013 ZSWIM1Q9BR11 485 aa9.34□□□□□ -0.91
COL8A1-203ENST00000452013 NAA15Q9BXJ9 866 aaKnown RBP9.34□□□□□ -0.91
COL8A1-203ENST00000452013 RNF38Q9H0F5 515 aa9.34□□□□□ -0.91
COL8A1-203ENST00000452013 SMG9Q9H0W8 520 aaKnown RBP9.34□□□□□ -0.91
COL8A1-203ENST00000452013 LHX5Q9H2C1 402 aa9.34□□□□□ -0.91
COL8A1-203ENST00000452013 SMOC2Q9H3U7 446 aa9.34□□□□□ -0.91
COL8A1-203ENST00000452013 C8orf33Q9H7E9 229 aaPredicted RBP9.34□□□□□ -0.91
COL8A1-203ENST00000452013 CNGB3Q9NQW8 809 aa9.34□□□□□ -0.91
COL8A1-203ENST00000452013 GKN1Q9NS71 199 aa9.34□□□□□ -0.91
COL8A1-203ENST00000452013 FAM207AQ9NSI2 230 aaPredicted RBP9.34□□□□□ -0.91
COL8A1-203ENST00000452013 NAGPAQ9UK23 515 aa9.34□□□□□ -0.91
COL8A1-203ENST00000452013 PCDHGC3Q9UN70 934 aa9.34□□□□□ -0.91
COL8A1-203ENST00000452013 SIK3Q9Y2K2 1263 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms