RNA–Protein interactions for RNA: ENST00000449062.1

RTFDC1-204, Transcript of Protein RTF2 homolog, humanhuman

TSL 5

Gene RTFDC1, Length 852 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-204ENST00000449062 EHBP1Q8NDI1 1231 aa14.89□□□□□ -0.03
RTFDC1-204ENST00000449062 OSCP1Q8WVF1 389 aa14.89□□□□□ -0.03
RTFDC1-204ENST00000449062 NELL1Q92832 810 aa14.89□□□□□ -0.03
RTFDC1-204ENST00000449062 FBXO32Q969P5 355 aa14.89□□□□□ -0.03
RTFDC1-204ENST00000449062 TMEM176AQ96HP8 235 aa14.89□□□□□ -0.03
RTFDC1-204ENST00000449062 ZFRQ96KR1 1074 aaKnown RBP14.89□□□□□ -0.03
RTFDC1-204ENST00000449062 HEXIM2Q96MH2 286 aaKnown RBP14.89□□□□□ -0.03
RTFDC1-204ENST00000449062 UBXN6Q9BZV1 441 aa14.89□□□□□ -0.03
RTFDC1-204ENST00000449062 CHRDQ9H2X0 955 aa14.89□□□□□ -0.03
RTFDC1-204ENST00000449062 EBF3Q9H4W6 596 aa14.89□□□□□ -0.03
RTFDC1-204ENST00000449062 FBRSL1Q9HCM7 1045 aaKnown RBP14.89□□□□□ -0.03
RTFDC1-204ENST00000449062 PNPLA8Q9NP80 782 aa14.89□□□□□ -0.03
RTFDC1-204ENST00000449062 NDRG2Q9UN36 371 aaKnown RBP14.89□□□□□ -0.03
RTFDC1-204ENST00000449062 SPTBN4Q9H254 2564 aa14.88□□□□□ -0.03
RTFDC1-204ENST00000449062 LEFTY2O00292 366 aa14.88□□□□□ -0.03
RTFDC1-204ENST00000449062 COCHO43405 550 aa14.88□□□□□ -0.03
RTFDC1-204ENST00000449062 CLSTN1O94985 981 aa14.88□□□□□ -0.03
RTFDC1-204ENST00000449062 FAM200BP0CF97 657 aa14.88□□□□□ -0.03
RTFDC1-204ENST00000449062 SP9P0CG40 484 aa14.88□□□□□ -0.03
RTFDC1-204ENST00000449062 PDE6CP51160 858 aa14.88□□□□□ -0.03
RTFDC1-204ENST00000449062 KIF11P52732 1056 aa14.88□□□□□ -0.03
RTFDC1-204ENST00000449062 KCNH2Q12809 1159 aa14.88□□□□□ -0.03
RTFDC1-204ENST00000449062 MTAPQ13126 283 aa14.88□□□□□ -0.03
RTFDC1-204ENST00000449062 CCDC40Q4G0X9 1142 aa14.88□□□□□ -0.03
RTFDC1-204ENST00000449062 ADGRG2Q8IZP9 1017 aa14.88□□□□□ -0.03
RTFDC1-204ENST00000449062 MLKLQ8NB16 471 aa14.88□□□□□ -0.03
RTFDC1-204ENST00000449062 PDZD8Q8NEN9 1154 aa14.88□□□□□ -0.03
RTFDC1-204ENST00000449062 OSER1Q9NX31 292 aa14.88□□□□□ -0.03
RTFDC1-204ENST00000449062 GMIPQ9P107 970 aa14.88□□□□□ -0.03
RTFDC1-204ENST00000449062 SCML2Q9UQR0 700 aa14.88□□□□□ -0.03
RTFDC1-204ENST00000449062 USP3Q9Y6I4 520 aa14.88□□□□□ -0.03
RTFDC1-204ENST00000449062 KIF26AQ9ULI4 1882 aaPredicted RBP14.88□□□□□ -0.03
RTFDC1-204ENST00000449062 TICRRQ7Z2Z1 1910 aa14.88□□□□□ -0.03
RTFDC1-204ENST00000449062 RNF225M0QZC1 329 aaPredicted RBP14.87□□□□□ -0.03
RTFDC1-204ENST00000449062 TRDMT1O14717 391 aaKnown RBP14.87□□□□□ -0.03
RTFDC1-204ENST00000449062 TDGF1P13385 188 aa14.87□□□□□ -0.03
RTFDC1-204ENST00000449062 TUBP50607 506 aa14.87□□□□□ -0.03
RTFDC1-204ENST00000449062 LRMPQ12912 555 aa14.87□□□□□ -0.03
RTFDC1-204ENST00000449062 CCINQ13939 588 aa14.87□□□□□ -0.03
RTFDC1-204ENST00000449062 GAB4Q2WGN9 574 aa14.87□□□□□ -0.03
RTFDC1-204ENST00000449062 ZNF528Q3MIS6 628 aa14.87□□□□□ -0.03
RTFDC1-204ENST00000449062 TMEM196Q5HYL7 178 aa14.87□□□□□ -0.03
RTFDC1-204ENST00000449062 HECTD3Q5T447 861 aa14.87□□□□□ -0.03
RTFDC1-204ENST00000449062 CC2D1AQ6P1N0 951 aaPredicted RBP14.87□□□□□ -0.03
RTFDC1-204ENST00000449062 SCD5Q86SK9 330 aa14.87□□□□□ -0.03
RTFDC1-204ENST00000449062 ANKRD52Q8NB46 1076 aa14.87□□□□□ -0.03
RTFDC1-204ENST00000449062 KAT5Q92993 513 aa14.87□□□□□ -0.03
RTFDC1-204ENST00000449062 FBXO44Q9H4M3 255 aa14.87□□□□□ -0.03
RTFDC1-204ENST00000449062 CCSER2Q9H7U1 834 aa14.87□□□□□ -0.03
RTFDC1-204ENST00000449062 ECT2Q9H8V3 914 aa14.87□□□□□ -0.03
RTFDC1-204ENST00000449062 DUS2Q9NX74 493 aaKnown RBP14.87□□□□□ -0.03
RTFDC1-204ENST00000449062 FBXO4Q9UKT5 387 aa14.87□□□□□ -0.03
RTFDC1-204ENST00000449062 CPQQ9Y646 472 aa14.87□□□□□ -0.03
RTFDC1-204ENST00000449062 WNT6Q9Y6F9 365 aa14.87□□□□□ -0.03
RTFDC1-204ENST00000449062 GREM1O60565 184 aa14.86□□□□□ -0.03
RTFDC1-204ENST00000449062 ABL1P00519 1130 aa14.86□□□□□ -0.03
RTFDC1-204ENST00000449062 GJA4P35212 333 aa14.86□□□□□ -0.03
RTFDC1-204ENST00000449062 GALK1P51570 392 aa14.86□□□□□ -0.03
RTFDC1-204ENST00000449062 IFRD2Q12894 506 aaPredicted RBP14.86□□□□□ -0.03
RTFDC1-204ENST00000449062 PON2Q15165 354 aa14.86□□□□□ -0.03
RTFDC1-204ENST00000449062 PKDCCQ504Y2 493 aa14.86□□□□□ -0.03
RTFDC1-204ENST00000449062 RAB41Q5JT25 222 aa14.86□□□□□ -0.03
RTFDC1-204ENST00000449062 NAIF1Q69YI7 327 aaPredicted RBP14.86□□□□□ -0.03
RTFDC1-204ENST00000449062 TTC30AQ86WT1 665 aa14.86□□□□□ -0.03
RTFDC1-204ENST00000449062 ZNF276Q8N554 614 aa14.86□□□□□ -0.03
RTFDC1-204ENST00000449062 TFAP2BQ92481 460 aa14.86□□□□□ -0.03
RTFDC1-204ENST00000449062 WBP2Q969T9 261 aa14.86□□□□□ -0.03
RTFDC1-204ENST00000449062 ZSWIM1Q9BR11 485 aa14.86□□□□□ -0.03
RTFDC1-204ENST00000449062 NMUR1Q9HB89 426 aa14.86□□□□□ -0.03
RTFDC1-204ENST00000449062 CYLDQ9NQC7 956 aa14.86□□□□□ -0.03
RTFDC1-204ENST00000449062 PRMT8Q9NR22 394 aaPredicted RBP14.86□□□□□ -0.03
RTFDC1-204ENST00000449062 RBM12Q9NTZ6 932 aaKnown RBP14.86□□□□□ -0.03
RTFDC1-204ENST00000449062 SPATA6Q9NWH7 488 aaPredicted RBP14.86□□□□□ -0.03
RTFDC1-204ENST00000449062 GABBR2O75899 941 aa14.85□□□□□ -0.03
RTFDC1-204ENST00000449062 TBX18O95935 607 aa14.85□□□□□ -0.03
RTFDC1-204ENST00000449062 AFPP02771 609 aaKnown RBP14.85□□□□□ -0.03
RTFDC1-204ENST00000449062 TBXAS1P24557 533 aaPredicted RBP14.85□□□□□ -0.03
RTFDC1-204ENST00000449062 DGKKQ5KSL6 1271 aa14.85□□□□□ -0.03
RTFDC1-204ENST00000449062 FSTL4Q6MZW2 842 aa14.85□□□□□ -0.03
RTFDC1-204ENST00000449062 CCDC186Q7Z3E2 898 aa14.85□□□□□ -0.03
RTFDC1-204ENST00000449062 ARHGEF19Q8IW93 802 aa14.85□□□□□ -0.03
RTFDC1-204ENST00000449062 SYNPOQ8N3V7 929 aa14.85□□□□□ -0.03
RTFDC1-204ENST00000449062 GPT2Q8TD30 523 aa14.85□□□□□ -0.03
RTFDC1-204ENST00000449062 EZH1Q92800 747 aaPredicted RBP14.85□□□□□ -0.03
RTFDC1-204ENST00000449062 KREMEN1Q96MU8 473 aa14.85□□□□□ -0.03
RTFDC1-204ENST00000449062 NT5C1BQ96P26 610 aa14.85□□□□□ -0.03
RTFDC1-204ENST00000449062 IPO9Q96P70 1041 aaKnown RBP14.85□□□□□ -0.03
RTFDC1-204ENST00000449062 IER2Q9BTL4 223 aa14.85□□□□□ -0.03
RTFDC1-204ENST00000449062 KLF16Q9BXK1 252 aaPredicted RBP14.85□□□□□ -0.03
RTFDC1-204ENST00000449062 C2orf42Q9NWW7 574 aa14.85□□□□□ -0.03
RTFDC1-204ENST00000449062 SMPD4Q9NXE4 827 aa14.85□□□□□ -0.03
RTFDC1-204ENST00000449062 CFAP97Q9P2B7 532 aa14.85□□□□□ -0.03
RTFDC1-204ENST00000449062 KIAA1257Q9ULG3 409 aa14.85□□□□□ -0.03
RTFDC1-204ENST00000449062 CNTN6Q9UQ52 1028 aa14.85□□□□□ -0.03
RTFDC1-204ENST00000449062 UTP18Q9Y5J1 556 aaKnown RBP eCLIP14.85□□□□□ -0.03
RTFDC1-204ENST00000449062 MIA3Q5JRA6 1907 aa14.84□□□□□ -0.03
RTFDC1-204ENST00000449062 E2F8A0AVK6 867 aa14.84□□□□□ -0.03
RTFDC1-204ENST00000449062 TULP2O00295 520 aa14.84□□□□□ -0.03
RTFDC1-204ENST00000449062 O00370 1275 aa14.84□□□□□ -0.03
RTFDC1-204ENST00000449062 CYP26A1O43174 497 aa14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms