RNA–Protein interactions for RNA: ENST00000448192.1

DDX56-207, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 691 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-207ENST00000448192 JAKMIP2Q96AA8 810 aa18.75■□□□□ 0.59
DDX56-207ENST00000448192 NT5C1AQ9BXI3 368 aa18.75■□□□□ 0.59
DDX56-207ENST00000448192 CFAP97Q9P2B7 532 aa18.75■□□□□ 0.59
DDX56-207ENST00000448192 GVINP1Q7Z2Y8 2422 aa18.75■□□□□ 0.59
DDX56-207ENST00000448192 SPTBN4Q9H254 2564 aa18.74■□□□□ 0.59
DDX56-207ENST00000448192 K7ESF4 209 aa18.74■□□□□ 0.59
DDX56-207ENST00000448192 RNF40O75150 1001 aa18.74■□□□□ 0.59
DDX56-207ENST00000448192 PAPSS2O95340 614 aaPredicted RBP18.74■□□□□ 0.59
DDX56-207ENST00000448192 OLFM2O95897 454 aa18.74■□□□□ 0.59
DDX56-207ENST00000448192 FAM200BP0CF97 657 aa18.74■□□□□ 0.59
DDX56-207ENST00000448192 DRD1P21728 446 aa18.74■□□□□ 0.59
DDX56-207ENST00000448192 COBLL1Q53SF7 1204 aa18.74■□□□□ 0.59
DDX56-207ENST00000448192 DCAF17Q5H9S7 520 aaPredicted RBP18.74■□□□□ 0.59
DDX56-207ENST00000448192 HECTD3Q5T447 861 aa18.74■□□□□ 0.59
DDX56-207ENST00000448192 ISM2Q6H9L7 571 aa18.74■□□□□ 0.59
DDX56-207ENST00000448192 PKN3Q6P5Z2 889 aa18.74■□□□□ 0.59
DDX56-207ENST00000448192 FILIP1Q7Z7B0 1213 aa18.74■□□□□ 0.59
DDX56-207ENST00000448192 FBXL13Q8NEE6 735 aa18.74■□□□□ 0.59
DDX56-207ENST00000448192 ZMIZ2Q8NF64 920 aa18.74■□□□□ 0.59
DDX56-207ENST00000448192 SPATA20Q8TB22 786 aa18.74■□□□□ 0.59
DDX56-207ENST00000448192 SEMA4DQ92854 862 aa18.74■□□□□ 0.59
DDX56-207ENST00000448192 CYFIP2Q96F07 1278 aa18.74■□□□□ 0.59
DDX56-207ENST00000448192 DNAI2Q9GZS0 605 aa18.74■□□□□ 0.59
DDX56-207ENST00000448192 CSNK1G1Q9HCP0 422 aa18.74■□□□□ 0.59
DDX56-207ENST00000448192 COMMD8Q9NX08 183 aa18.74■□□□□ 0.59
DDX56-207ENST00000448192 IL37Q9NZH6 218 aa18.74■□□□□ 0.59
DDX56-207ENST00000448192 GMIPQ9P107 970 aa18.74■□□□□ 0.59
DDX56-207ENST00000448192 KIAA1549LQ6ZVL6 1849 aa18.73■□□□□ 0.59
DDX56-207ENST00000448192 TRIM49BA6NDI0 452 aa18.73■□□□□ 0.59
DDX56-207ENST00000448192 COCHO43405 550 aa18.73■□□□□ 0.59
DDX56-207ENST00000448192 ATG13O75143 517 aa18.73■□□□□ 0.59
DDX56-207ENST00000448192 CILPO75339 1184 aa18.73■□□□□ 0.59
DDX56-207ENST00000448192 HOXC13P31276 330 aa18.73■□□□□ 0.59
DDX56-207ENST00000448192 PMS1P54277 932 aaKnown RBP18.73■□□□□ 0.59
DDX56-207ENST00000448192 FKBP3Q00688 224 aaKnown RBP18.73■□□□□ 0.59
DDX56-207ENST00000448192 ZNF394Q53GI3 561 aa18.73■□□□□ 0.59
DDX56-207ENST00000448192 WHAMMQ8TF30 809 aa18.73■□□□□ 0.59
DDX56-207ENST00000448192 HNRNPABQ99729 332 aaKnown RBP18.73■□□□□ 0.59
DDX56-207ENST00000448192 GTPBP4Q9BZE4 634 aaKnown RBP18.73■□□□□ 0.59
DDX56-207ENST00000448192 CCSER2Q9H7U1 834 aa18.73■□□□□ 0.59
DDX56-207ENST00000448192 RAB20Q9NX57 234 aa18.73■□□□□ 0.59
DDX56-207ENST00000448192 RAB23Q9ULC3 237 aa18.73■□□□□ 0.59
DDX56-207ENST00000448192 OTOGLQ3ZCN5 2332 aa18.73■□□□□ 0.59
DDX56-207ENST00000448192 SLC9A3R1O14745 358 aaPredicted RBP18.72■□□□□ 0.59
DDX56-207ENST00000448192 SLC16A3O15427 465 aaKnown RBP18.72■□□□□ 0.59
DDX56-207ENST00000448192 MCCD1P59942 119 aaPredicted RBP18.72■□□□□ 0.59
DDX56-207ENST00000448192 STIM1Q13586 685 aa18.72■□□□□ 0.59
DDX56-207ENST00000448192 LPAL2Q16609 132 aa18.72■□□□□ 0.59
DDX56-207ENST00000448192 SNX30Q5VWJ9 437 aa18.72■□□□□ 0.59
DDX56-207ENST00000448192 PRR23BQ6ZRT6 265 aa18.72■□□□□ 0.59
DDX56-207ENST00000448192 CLEC20AQ6ZU45 233 aa18.72■□□□□ 0.59
DDX56-207ENST00000448192 LONP2Q86WA8 852 aa18.72■□□□□ 0.59
DDX56-207ENST00000448192 DDX42Q86XP3 938 aaKnown RBP eCLIP18.72■□□□□ 0.59
DDX56-207ENST00000448192 SECISBP2LQ93073 1101 aaKnown RBP18.72■□□□□ 0.59
DDX56-207ENST00000448192 NACA2Q9H009 215 aa18.72■□□□□ 0.59
DDX56-207ENST00000448192 FBXO44Q9H4M3 255 aa18.72■□□□□ 0.59
DDX56-207ENST00000448192 MYOFQ9NZM1 2061 aa18.72■□□□□ 0.59
DDX56-207ENST00000448192 FAM92AA1XBS5 289 aa18.71■□□□□ 0.59
DDX56-207ENST00000448192 CYP17A1P05093 508 aa18.71■□□□□ 0.59
DDX56-207ENST00000448192 ZDHHC11BP0C7U3 371 aa18.71■□□□□ 0.59
DDX56-207ENST00000448192 LRRC63Q05C16 580 aa18.71■□□□□ 0.59
DDX56-207ENST00000448192 SRSF5Q13243 272 aaKnown RBP18.71■□□□□ 0.59
DDX56-207ENST00000448192 FBXO43Q4G163 708 aa18.71■□□□□ 0.59
DDX56-207ENST00000448192 GPRIN1Q7Z2K8 1008 aa18.71■□□□□ 0.59
DDX56-207ENST00000448192 ADGRG2Q8IZP9 1017 aa18.71■□□□□ 0.59
DDX56-207ENST00000448192 TATDN2Q93075 761 aa18.71■□□□□ 0.59
DDX56-207ENST00000448192 HEXIM2Q96MH2 286 aaKnown RBP18.71■□□□□ 0.59
DDX56-207ENST00000448192 TLR8Q9NR97 1041 aaKnown RBP18.71■□□□□ 0.59
DDX56-207ENST00000448192 MAN1B1Q9UKM7 699 aa18.71■□□□□ 0.59
DDX56-207ENST00000448192 SLC8A2Q9UPR5 921 aa18.71■□□□□ 0.59
DDX56-207ENST00000448192 DMXL1Q9Y485 3027 aa18.71■□□□□ 0.59
DDX56-207ENST00000448192 PSMA7O14818 248 aa18.7■□□□□ 0.58
DDX56-207ENST00000448192 HRO43593 1189 aa18.7■□□□□ 0.58
DDX56-207ENST00000448192 GADD45BO75293 160 aaPredicted RBP18.7■□□□□ 0.58
DDX56-207ENST00000448192 ACO1P21399 889 aaKnown RBP18.7■□□□□ 0.58
DDX56-207ENST00000448192 PXNP49023 591 aaPredicted RBP18.7■□□□□ 0.58
DDX56-207ENST00000448192 PGFP49763 221 aa18.7■□□□□ 0.58
DDX56-207ENST00000448192 TUBP50607 506 aa18.7■□□□□ 0.58
DDX56-207ENST00000448192 SIM2Q14190 667 aaPredicted RBP18.7■□□□□ 0.58
DDX56-207ENST00000448192 DHCR24Q15392 516 aa18.7■□□□□ 0.58
DDX56-207ENST00000448192 CBWD6Q4V339 395 aa18.7■□□□□ 0.58
DDX56-207ENST00000448192 CBWD3Q5JTY5 395 aa18.7■□□□□ 0.58
DDX56-207ENST00000448192 CBWD5Q5RIA9 395 aa18.7■□□□□ 0.58
DDX56-207ENST00000448192 ZC3H3Q8IXZ2 948 aaKnown RBP18.7■□□□□ 0.58
DDX56-207ENST00000448192 KIAA1958Q8N8K9 716 aa18.7■□□□□ 0.58
DDX56-207ENST00000448192 RPLP0P6Q8NHW5 317 aa18.7■□□□□ 0.58
DDX56-207ENST00000448192 EZH1Q92800 747 aaPredicted RBP18.7■□□□□ 0.58
DDX56-207ENST00000448192 ARID3AQ99856 593 aa18.7■□□□□ 0.58
DDX56-207ENST00000448192 CISHQ9NSE2 258 aa18.7■□□□□ 0.58
DDX56-207ENST00000448192 POLR3BQ9NW08 1133 aaPredicted RBP18.7■□□□□ 0.58
DDX56-207ENST00000448192 ARMCX3Q9UH62 379 aaPredicted RBP18.7■□□□□ 0.58
DDX56-207ENST00000448192 GMEB2Q9UKD1 530 aa18.7■□□□□ 0.58
DDX56-207ENST00000448192 SH3BP1Q9Y3L3 701 aa18.7■□□□□ 0.58
DDX56-207ENST00000448192 E2F8A0AVK6 867 aa18.69■□□□□ 0.58
DDX56-207ENST00000448192 HHLA1C9JL84 531 aa18.69■□□□□ 0.58
DDX56-207ENST00000448192 CYP26A1O43174 497 aa18.69■□□□□ 0.58
DDX56-207ENST00000448192 TLR5O60602 858 aa18.69■□□□□ 0.58
DDX56-207ENST00000448192 IRF1P10914 325 aa18.69■□□□□ 0.58
DDX56-207ENST00000448192 CD44P16070 742 aaKnown RBP18.69■□□□□ 0.58
DDX56-207ENST00000448192 CNR2P34972 360 aa18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms