RNA–Protein interactions for RNA: ENST00000448056.1

AC004540.1-206, humanhuman

TSL 3

Gene AC004540.1, Length 567 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-206ENST00000448056 RPL34P49207 117 aaKnown RBP7.96□□□□□ -1.14
AC004540.1-206ENST00000448056 CDK17Q00537 523 aa7.96□□□□□ -1.14
AC004540.1-206ENST00000448056 MTMR3Q13615 1198 aa7.96□□□□□ -1.14
AC004540.1-206ENST00000448056 VEPH1Q14D04 833 aa7.96□□□□□ -1.14
AC004540.1-206ENST00000448056 RAB41Q5JT25 222 aa7.96□□□□□ -1.14
AC004540.1-206ENST00000448056 TMC5Q6UXY8 1006 aa7.96□□□□□ -1.14
AC004540.1-206ENST00000448056 CYP26C1Q6V0L0 522 aa7.96□□□□□ -1.14
AC004540.1-206ENST00000448056 TRIM72Q6ZMU5 477 aa7.96□□□□□ -1.14
AC004540.1-206ENST00000448056 EP400NLQ6ZTU2 488 aa7.96□□□□□ -1.14
AC004540.1-206ENST00000448056 ITIH5Q86UX2 942 aa7.96□□□□□ -1.14
AC004540.1-206ENST00000448056 PIGZQ86VD9 579 aa7.96□□□□□ -1.14
AC004540.1-206ENST00000448056 PASD1Q8IV76 773 aa7.96□□□□□ -1.14
AC004540.1-206ENST00000448056 NUP93Q8N1F7 819 aa7.96□□□□□ -1.14
AC004540.1-206ENST00000448056 ELMOD1Q8N336 334 aa7.96□□□□□ -1.14
AC004540.1-206ENST00000448056 TMEM35BQ8NCS4 154 aa7.96□□□□□ -1.14
AC004540.1-206ENST00000448056 SCAMP5Q8TAC9 235 aa7.96□□□□□ -1.14
AC004540.1-206ENST00000448056 SLC30A5Q8TAD4 765 aa7.96□□□□□ -1.14
AC004540.1-206ENST00000448056 OLIG1Q8TAK6 271 aa7.96□□□□□ -1.14
AC004540.1-206ENST00000448056 FEZF2Q8TBJ5 459 aa7.96□□□□□ -1.14
AC004540.1-206ENST00000448056 CPA5Q8WXQ8 436 aa7.96□□□□□ -1.14
AC004540.1-206ENST00000448056 KCTD13Q8WZ19 329 aa7.96□□□□□ -1.14
AC004540.1-206ENST00000448056 ANP32BQ92688 251 aaKnown RBP7.96□□□□□ -1.14
AC004540.1-206ENST00000448056 PSMG2Q969U7 264 aa7.96□□□□□ -1.14
AC004540.1-206ENST00000448056 ZNF707Q96C28 371 aaPredicted RBP7.96□□□□□ -1.14
AC004540.1-206ENST00000448056 MSLNLQ96KJ4 702 aa7.96□□□□□ -1.14
AC004540.1-206ENST00000448056 HSFY1Q96LI6 401 aa7.96□□□□□ -1.14
AC004540.1-206ENST00000448056 MYRFLQ96LU7 910 aa7.96□□□□□ -1.14
AC004540.1-206ENST00000448056 CHP1Q99653 195 aa7.96□□□□□ -1.14
AC004540.1-206ENST00000448056 ADAM7Q9H2U9 754 aa7.96□□□□□ -1.14
AC004540.1-206ENST00000448056 SFXN1Q9H9B4 322 aa7.96□□□□□ -1.14
AC004540.1-206ENST00000448056 PNPLA8Q9NP80 782 aa7.96□□□□□ -1.14
AC004540.1-206ENST00000448056 COMMD8Q9NX08 183 aa7.96□□□□□ -1.14
AC004540.1-206ENST00000448056 IL37Q9NZH6 218 aa7.96□□□□□ -1.14
AC004540.1-206ENST00000448056 ARHGAP20Q9P2F6 1191 aa7.96□□□□□ -1.14
AC004540.1-206ENST00000448056 CYTH4Q9UIA0 394 aa7.96□□□□□ -1.14
AC004540.1-206ENST00000448056 GOLGA6L6A8MZA4 724 aa7.95□□□□□ -1.14
AC004540.1-206ENST00000448056 DDX3XO00571 662 aaKnown RBP eCLIP7.95□□□□□ -1.14
AC004540.1-206ENST00000448056 TBX10O75333 385 aa7.95□□□□□ -1.14
AC004540.1-206ENST00000448056 RTN3O95197 1032 aaPredicted RBP7.95□□□□□ -1.14
AC004540.1-206ENST00000448056 CSH1P0DML2 217 aa7.95□□□□□ -1.14
AC004540.1-206ENST00000448056 CSH2P0DML3 217 aa7.95□□□□□ -1.14
AC004540.1-206ENST00000448056 UNGP13051 313 aaPredicted RBP7.95□□□□□ -1.14
AC004540.1-206ENST00000448056 PTPN2P17706 415 aa7.95□□□□□ -1.14
AC004540.1-206ENST00000448056 YWHAQP27348 245 aa7.95□□□□□ -1.14
AC004540.1-206ENST00000448056 EIF4A3P38919 411 aaKnown RBP7.95□□□□□ -1.14
AC004540.1-206ENST00000448056 RGS7P49802 495 aa7.95□□□□□ -1.14
AC004540.1-206ENST00000448056 TKTL1P51854 596 aa7.95□□□□□ -1.14
AC004540.1-206ENST00000448056 KIF11P52732 1056 aa7.95□□□□□ -1.14
AC004540.1-206ENST00000448056 SLC5A3P53794 718 aa7.95□□□□□ -1.14
AC004540.1-206ENST00000448056 GSDMDP57764 484 aa7.95□□□□□ -1.14
AC004540.1-206ENST00000448056 COPS2P61201 443 aa7.95□□□□□ -1.14
AC004540.1-206ENST00000448056 ITIH3Q06033 890 aa7.95□□□□□ -1.14
AC004540.1-206ENST00000448056 TAF12Q16514 161 aa7.95□□□□□ -1.14
AC004540.1-206ENST00000448056 QPCTQ16769 361 aa7.95□□□□□ -1.14
AC004540.1-206ENST00000448056 CLEC16AQ2KHT3 1053 aa7.95□□□□□ -1.14
AC004540.1-206ENST00000448056 ASTE1Q2TB18 679 aaPredicted RBP7.95□□□□□ -1.14
AC004540.1-206ENST00000448056 RARS2Q5T160 578 aaKnown RBP7.95□□□□□ -1.14
AC004540.1-206ENST00000448056 NAA35Q5VZE5 725 aa7.95□□□□□ -1.14
AC004540.1-206ENST00000448056 ACAD10Q6JQN1 1059 aa7.95□□□□□ -1.14
AC004540.1-206ENST00000448056 DENND5BQ6ZUT9 1274 aa7.95□□□□□ -1.14
AC004540.1-206ENST00000448056 GPRIN1Q7Z2K8 1008 aa7.95□□□□□ -1.14
AC004540.1-206ENST00000448056 CCDC186Q7Z3E2 898 aa7.95□□□□□ -1.14
AC004540.1-206ENST00000448056 GPR149Q86SP6 731 aa7.95□□□□□ -1.14
AC004540.1-206ENST00000448056 TMEM110Q86TL2 294 aa7.95□□□□□ -1.14
AC004540.1-206ENST00000448056 C1orf131Q8NDD1 294 aaKnown RBP7.95□□□□□ -1.14
AC004540.1-206ENST00000448056 STKLD1Q8NE28 680 aa7.95□□□□□ -1.14
AC004540.1-206ENST00000448056 SMG7Q92540 1137 aaKnown RBP7.95□□□□□ -1.14
AC004540.1-206ENST00000448056 TRMT2BQ96GJ1 504 aaKnown RBP7.95□□□□□ -1.14
AC004540.1-206ENST00000448056 PPP1R13BQ96KQ4 1090 aa7.95□□□□□ -1.14
AC004540.1-206ENST00000448056 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP7.95□□□□□ -1.14
AC004540.1-206ENST00000448056 TTLL2Q9BWV7 592 aa7.95□□□□□ -1.14
AC004540.1-206ENST00000448056 APOL5Q9BWW9 433 aa7.95□□□□□ -1.14
AC004540.1-206ENST00000448056 LRRC3Q9BY71 257 aa7.95□□□□□ -1.14
AC004540.1-206ENST00000448056 FBXO44Q9H4M3 255 aa7.95□□□□□ -1.14
AC004540.1-206ENST00000448056 NHEJ1Q9H9Q4 299 aaPredicted RBP7.95□□□□□ -1.14
AC004540.1-206ENST00000448056 PIDD1Q9HB75 910 aa7.95□□□□□ -1.14
AC004540.1-206ENST00000448056 IL21Q9HBE4 155 aa7.95□□□□□ -1.14
AC004540.1-206ENST00000448056 LRRC4Q9HBW1 653 aa7.95□□□□□ -1.14
AC004540.1-206ENST00000448056 SEPT11Q9NVA2 429 aaKnown RBP7.95□□□□□ -1.14
AC004540.1-206ENST00000448056 HCFC1R1Q9NWW0 138 aa7.95□□□□□ -1.14
AC004540.1-206ENST00000448056 EHD2Q9NZN4 543 aa7.95□□□□□ -1.14
AC004540.1-206ENST00000448056 DNMT3BQ9UBC3 853 aaKnown RBP7.95□□□□□ -1.14
AC004540.1-206ENST00000448056 ADAMTS1Q9UHI8 967 aa7.95□□□□□ -1.14
AC004540.1-206ENST00000448056 CEP83Q9Y592 693 aa7.95□□□□□ -1.14
AC004540.1-206ENST00000448056 USP3Q9Y6I4 520 aa7.95□□□□□ -1.14
AC004540.1-206ENST00000448056 XIRP2A4UGR9 3374 aa7.94□□□□□ -1.14
AC004540.1-206ENST00000448056 EYSQ5T1H1 3165 aa7.94□□□□□ -1.14
AC004540.1-206ENST00000448056 A0A087X0T9 212 aa7.94□□□□□ -1.14
AC004540.1-206ENST00000448056 SSU72P8A0A1W2PR75 194 aa7.94□□□□□ -1.14
AC004540.1-206ENST00000448056 FAM92AA1XBS5 289 aa7.94□□□□□ -1.14
AC004540.1-206ENST00000448056 PIK3R2O00459 728 aa7.94□□□□□ -1.14
AC004540.1-206ENST00000448056 ZBED1O96006 694 aa7.94□□□□□ -1.14
AC004540.1-206ENST00000448056 FTLP02792 175 aaPredicted RBP7.94□□□□□ -1.14
AC004540.1-206ENST00000448056 RHOP08100 348 aa7.94□□□□□ -1.14
AC004540.1-206ENST00000448056 USP17L7P0C7H9 530 aa7.94□□□□□ -1.14
AC004540.1-206ENST00000448056 FAM228BP0C875 321 aa7.94□□□□□ -1.14
AC004540.1-206ENST00000448056 GZMAP12544 262 aa7.94□□□□□ -1.14
AC004540.1-206ENST00000448056 LCP1P13796 627 aa7.94□□□□□ -1.14
AC004540.1-206ENST00000448056 ACADSBP45954 432 aa7.94□□□□□ -1.14
AC004540.1-206ENST00000448056 GABRB2P47870 512 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 79.9 ms