RNA–Protein interactions for RNA: ENST00000442572.1

CDCA4P3-201, Transcript of cell division cycle associated 4 pseudogene 3, humanhuman

BASIC

Gene CDCA4P3, Length 689 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA4P3-201ENST00000442572 HESX1Q9UBX0 185 aa13.25□□□□□ -0.29
CDCA4P3-201ENST00000442572 CNTN6Q9UQ52 1028 aa13.25□□□□□ -0.29
CDCA4P3-201ENST00000442572 CCL26Q9Y258 94 aa13.25□□□□□ -0.29
CDCA4P3-201ENST00000442572 MUC6Q6W4X9 2439 aa13.25□□□□□ -0.29
CDCA4P3-201ENST00000442572 FANCMQ8IYD8 2048 aa13.25□□□□□ -0.29
CDCA4P3-201ENST00000442572 SLC9A3R1O14745 358 aaPredicted RBP13.24□□□□□ -0.29
CDCA4P3-201ENST00000442572 SETSIPP0DME0 302 aa13.24□□□□□ -0.29
CDCA4P3-201ENST00000442572 PTMSP20962 102 aa13.24□□□□□ -0.29
CDCA4P3-201ENST00000442572 ACO1P21399 889 aaKnown RBP13.24□□□□□ -0.29
CDCA4P3-201ENST00000442572 KIF11P52732 1056 aa13.24□□□□□ -0.29
CDCA4P3-201ENST00000442572 BST2Q10589 180 aaKnown RBP13.24□□□□□ -0.29
CDCA4P3-201ENST00000442572 IFRD2Q12894 506 aaPredicted RBP13.24□□□□□ -0.29
CDCA4P3-201ENST00000442572 CNGA2Q16280 664 aa13.24□□□□□ -0.29
CDCA4P3-201ENST00000442572 MEA1Q16626 185 aa13.24□□□□□ -0.29
CDCA4P3-201ENST00000442572 EXOC3L4Q17RC7 722 aa13.24□□□□□ -0.29
CDCA4P3-201ENST00000442572 ITPRIPL2Q3MIP1 535 aa13.24□□□□□ -0.29
CDCA4P3-201ENST00000442572 KLHDC10Q6PID8 442 aa13.24□□□□□ -0.29
CDCA4P3-201ENST00000442572 TRIM65Q6PJ69 517 aa13.24□□□□□ -0.29
CDCA4P3-201ENST00000442572 TMEM270Q6UE05 265 aa13.24□□□□□ -0.29
CDCA4P3-201ENST00000442572 OSCP1Q8WVF1 389 aa13.24□□□□□ -0.29
CDCA4P3-201ENST00000442572 ATP2A3Q93084 1043 aa13.24□□□□□ -0.29
CDCA4P3-201ENST00000442572 CLDN23Q96B33 292 aa13.24□□□□□ -0.29
CDCA4P3-201ENST00000442572 SLC22A12Q96S37 553 aa13.24□□□□□ -0.29
CDCA4P3-201ENST00000442572 CYP2S1Q96SQ9 504 aa13.24□□□□□ -0.29
CDCA4P3-201ENST00000442572 CDK5RAP1Q96SZ6 601 aaKnown RBP13.24□□□□□ -0.29
CDCA4P3-201ENST00000442572 SMG9Q9H0W8 520 aaKnown RBP13.24□□□□□ -0.29
CDCA4P3-201ENST00000442572 CYLDQ9NQC7 956 aa13.24□□□□□ -0.29
CDCA4P3-201ENST00000442572 GKN1Q9NS71 199 aa13.24□□□□□ -0.29
CDCA4P3-201ENST00000442572 DLGAP2Q9P1A6 1054 aa13.24□□□□□ -0.29
CDCA4P3-201ENST00000442572 PCDHB4Q9Y5E5 795 aa13.24□□□□□ -0.29
CDCA4P3-201ENST00000442572 USP3Q9Y6I4 520 aa13.24□□□□□ -0.29
CDCA4P3-201ENST00000442572 PIAS3Q9Y6X2 628 aa13.24□□□□□ -0.29
CDCA4P3-201ENST00000442572 XPO1O14980 1071 aaKnown RBP13.23□□□□□ -0.29
CDCA4P3-201ENST00000442572 PI15O43692 258 aa13.23□□□□□ -0.29
CDCA4P3-201ENST00000442572 ABCB7O75027 752 aa13.23□□□□□ -0.29
CDCA4P3-201ENST00000442572 ABL1P00519 1130 aa13.23□□□□□ -0.29
CDCA4P3-201ENST00000442572 CD19P15391 556 aa13.23□□□□□ -0.29
CDCA4P3-201ENST00000442572 KPNA1P52294 538 aaPredicted RBP13.23□□□□□ -0.29
CDCA4P3-201ENST00000442572 ZNF132P52740 706 aa13.23□□□□□ -0.29
CDCA4P3-201ENST00000442572 MFAP3P55082 362 aa13.23□□□□□ -0.29
CDCA4P3-201ENST00000442572 NR1H3Q13133 447 aa13.23□□□□□ -0.29
CDCA4P3-201ENST00000442572 RUNX3Q13761 415 aa13.23□□□□□ -0.29
CDCA4P3-201ENST00000442572 UBXN2BQ14CS0 331 aa13.23□□□□□ -0.29
CDCA4P3-201ENST00000442572 STX1AQ16623 288 aa13.23□□□□□ -0.29
CDCA4P3-201ENST00000442572 RAB41Q5JT25 222 aa13.23□□□□□ -0.29
CDCA4P3-201ENST00000442572 IER5LQ5T953 404 aa13.23□□□□□ -0.29
CDCA4P3-201ENST00000442572 LCLAT1Q6UWP7 414 aa13.23□□□□□ -0.29
CDCA4P3-201ENST00000442572 TADA2BQ86TJ2 420 aa13.23□□□□□ -0.29
CDCA4P3-201ENST00000442572 CREBRFQ8IUR6 639 aa13.23□□□□□ -0.29
CDCA4P3-201ENST00000442572 ARHGEF19Q8IW93 802 aa13.23□□□□□ -0.29
CDCA4P3-201ENST00000442572 ARHGAP18Q8N392 663 aa13.23□□□□□ -0.29
CDCA4P3-201ENST00000442572 DTWD2Q8NBA8 298 aa13.23□□□□□ -0.29
CDCA4P3-201ENST00000442572 SH3RF2Q8TEC5 729 aa13.23□□□□□ -0.29
CDCA4P3-201ENST00000442572 OTUB2Q96DC9 234 aa13.23□□□□□ -0.29
CDCA4P3-201ENST00000442572 TUBGCP2Q9BSJ2 902 aa13.23□□□□□ -0.29
CDCA4P3-201ENST00000442572 RNF38Q9H0F5 515 aa13.23□□□□□ -0.29
CDCA4P3-201ENST00000442572 NDST4Q9H3R1 872 aa13.23□□□□□ -0.29
CDCA4P3-201ENST00000442572 CLIC5Q9NZA1 410 aa13.23□□□□□ -0.29
CDCA4P3-201ENST00000442572 APEX2Q9UBZ4 518 aa13.23□□□□□ -0.29
CDCA4P3-201ENST00000442572 CHORDC1Q9UHD1 332 aaPredicted RBP13.23□□□□□ -0.29
CDCA4P3-201ENST00000442572 TSPAN16Q9UKR8 245 aa13.23□□□□□ -0.29
CDCA4P3-201ENST00000442572 KIAA1549LQ6ZVL6 1849 aa13.23□□□□□ -0.29
CDCA4P3-201ENST00000442572 MYOFQ9NZM1 2061 aa13.22□□□□□ -0.29
CDCA4P3-201ENST00000442572 FAM170BA6NMN3 283 aa13.22□□□□□ -0.29
CDCA4P3-201ENST00000442572 KCNJ18B7U540 433 aa13.22□□□□□ -0.29
CDCA4P3-201ENST00000442572 O00370 1275 aa13.22□□□□□ -0.29
CDCA4P3-201ENST00000442572 TLR5O60602 858 aa13.22□□□□□ -0.29
CDCA4P3-201ENST00000442572 TARSP26639 723 aaKnown RBP13.22□□□□□ -0.29
CDCA4P3-201ENST00000442572 CTHP32929 405 aa13.22□□□□□ -0.29
CDCA4P3-201ENST00000442572 PLA2G4AP47712 749 aa13.22□□□□□ -0.29
CDCA4P3-201ENST00000442572 IFNAR2P48551 515 aa13.22□□□□□ -0.29
CDCA4P3-201ENST00000442572 KCNJ12Q14500 433 aa13.22□□□□□ -0.29
CDCA4P3-201ENST00000442572 VWA3BQ502W6 1294 aa13.22□□□□□ -0.29
CDCA4P3-201ENST00000442572 PKDCCQ504Y2 493 aa13.22□□□□□ -0.29
CDCA4P3-201ENST00000442572 TCP11X2Q5H9J9 407 aa13.22□□□□□ -0.29
CDCA4P3-201ENST00000442572 MAMSTRQ6ZN01 415 aa13.22□□□□□ -0.29
CDCA4P3-201ENST00000442572 RRAGAQ7L523 313 aa13.22□□□□□ -0.29
CDCA4P3-201ENST00000442572 TTC30AQ86WT1 665 aa13.22□□□□□ -0.29
CDCA4P3-201ENST00000442572 GPIHBP1Q8IV16 184 aa13.22□□□□□ -0.29
CDCA4P3-201ENST00000442572 SCML4Q8N228 414 aa13.22□□□□□ -0.29
CDCA4P3-201ENST00000442572 CPA6Q8N4T0 437 aa13.22□□□□□ -0.29
CDCA4P3-201ENST00000442572 RBBP8NLQ8NC74 664 aaPredicted RBP13.22□□□□□ -0.29
CDCA4P3-201ENST00000442572 KCTD13Q8WZ19 329 aa13.22□□□□□ -0.29
CDCA4P3-201ENST00000442572 FAM3CQ92520 227 aa13.22□□□□□ -0.29
CDCA4P3-201ENST00000442572 ZFYVE19Q96K21 471 aa13.22□□□□□ -0.29
CDCA4P3-201ENST00000442572 KREMEN1Q96MU8 473 aa13.22□□□□□ -0.29
CDCA4P3-201ENST00000442572 FOXQ1Q9C009 403 aa13.22□□□□□ -0.29
CDCA4P3-201ENST00000442572 UBE2TQ9NPD8 197 aaPredicted RBP13.22□□□□□ -0.29
CDCA4P3-201ENST00000442572 DUS2Q9NX74 493 aaKnown RBP13.22□□□□□ -0.29
CDCA4P3-201ENST00000442572 GTSE1Q9NYZ3 720 aa13.22□□□□□ -0.29
CDCA4P3-201ENST00000442572 GMIPQ9P107 970 aa13.22□□□□□ -0.29
CDCA4P3-201ENST00000442572 TBC1D14Q9P2M4 693 aa13.22□□□□□ -0.29
CDCA4P3-201ENST00000442572 NFE2L3Q9Y4A8 694 aa13.22□□□□□ -0.29
CDCA4P3-201ENST00000442572 COL4A3Q01955 1670 aa13.21□□□□□ -0.29
CDCA4P3-201ENST00000442572 CACNA1IQ9P0X4 2223 aa13.21□□□□□ -0.29
CDCA4P3-201ENST00000442572 E2F8A0AVK6 867 aa13.21□□□□□ -0.29
CDCA4P3-201ENST00000442572 SHISA7A6NL88 538 aa13.21□□□□□ -0.29
CDCA4P3-201ENST00000442572 SPECC1L-ADORA2AF8WAN1 911 aa13.21□□□□□ -0.29
CDCA4P3-201ENST00000442572 LEFTY2O00292 366 aa13.21□□□□□ -0.29
CDCA4P3-201ENST00000442572 COCHO43405 550 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms