RNA–Protein interactions for RNA: ENST00000442489.1

CDKN1B-203, Transcript of cyclin dependent kinase inhibitor 1B, humanhuman

TSL 5

Gene CDKN1B, Length 577 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1B-203ENST00000442489 RAD23BP54727 409 aa17.56■□□□□ 0.4
CDKN1B-203ENST00000442489 NRLP54845 237 aa17.56■□□□□ 0.4
CDKN1B-203ENST00000442489 SLC7A9P82251 487 aa17.56■□□□□ 0.4
CDKN1B-203ENST00000442489 FOXK2Q01167 660 aa17.56■□□□□ 0.4
CDKN1B-203ENST00000442489 KCNH2Q12809 1159 aa17.56■□□□□ 0.4
CDKN1B-203ENST00000442489 TAF10Q12962 218 aa17.56■□□□□ 0.4
CDKN1B-203ENST00000442489 USP4Q13107 963 aa17.56■□□□□ 0.4
CDKN1B-203ENST00000442489 ZNF77Q15935 545 aa17.56■□□□□ 0.4
CDKN1B-203ENST00000442489 ARHGAP17Q68EM7 881 aa17.56■□□□□ 0.4
CDKN1B-203ENST00000442489 RBM43Q6ZSC3 357 aaKnown RBP17.56■□□□□ 0.4
CDKN1B-203ENST00000442489 CLEC20AQ6ZU45 233 aa17.56■□□□□ 0.4
CDKN1B-203ENST00000442489 RALGPS2Q86X27 583 aaPredicted RBP17.56■□□□□ 0.4
CDKN1B-203ENST00000442489 SLC4A11Q8NBS3 891 aa17.56■□□□□ 0.4
CDKN1B-203ENST00000442489 FBXO44Q9H4M3 255 aa17.56■□□□□ 0.4
CDKN1B-203ENST00000442489 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.56■□□□□ 0.4
CDKN1B-203ENST00000442489 FAM49BQ9NUQ9 324 aa17.56■□□□□ 0.4
CDKN1B-203ENST00000442489 DACH1Q9UI36 760 aa17.56■□□□□ 0.4
CDKN1B-203ENST00000442489 SMG5Q9UPR3 1016 aaKnown RBP17.56■□□□□ 0.4
CDKN1B-203ENST00000442489 CCL26Q9Y258 94 aa17.56■□□□□ 0.4
CDKN1B-203ENST00000442489 F5P12259 2224 aa17.55■□□□□ 0.4
CDKN1B-203ENST00000442489 C2orf78A6NCI8 922 aa17.55■□□□□ 0.4
CDKN1B-203ENST00000442489 HHLA1C9JL84 531 aa17.55■□□□□ 0.4
CDKN1B-203ENST00000442489 GOLGA6L22H0YM25 854 aa17.55■□□□□ 0.4
CDKN1B-203ENST00000442489 BEST1O76090 585 aa17.55■□□□□ 0.4
CDKN1B-203ENST00000442489 AFPP02771 609 aaKnown RBP17.55■□□□□ 0.4
CDKN1B-203ENST00000442489 PRKCSHP14314 528 aaPredicted RBP17.55■□□□□ 0.4
CDKN1B-203ENST00000442489 HDCP19113 662 aa17.55■□□□□ 0.4
CDKN1B-203ENST00000442489 ERCC5P28715 1186 aaPredicted RBP17.55■□□□□ 0.4
CDKN1B-203ENST00000442489 CTHP32929 405 aa17.55■□□□□ 0.4
CDKN1B-203ENST00000442489 CXCL12P48061 93 aa17.55■□□□□ 0.4
CDKN1B-203ENST00000442489 ORC1Q13415 861 aa17.55■□□□□ 0.4
CDKN1B-203ENST00000442489 NELL1Q92832 810 aa17.55■□□□□ 0.4
CDKN1B-203ENST00000442489 SLC22A12Q96S37 553 aa17.55■□□□□ 0.4
CDKN1B-203ENST00000442489 ARID3AQ99856 593 aa17.55■□□□□ 0.4
CDKN1B-203ENST00000442489 UBXN6Q9BZV1 441 aa17.55■□□□□ 0.4
CDKN1B-203ENST00000442489 RBM12Q9NTZ6 932 aaKnown RBP17.55■□□□□ 0.4
CDKN1B-203ENST00000442489 UTP18Q9Y5J1 556 aaKnown RBP eCLIP17.55■□□□□ 0.4
CDKN1B-203ENST00000442489 CFAP54Q96N23 3096 aa17.55■□□□□ 0.4
CDKN1B-203ENST00000442489 LILRB5O75023 590 aa17.54■□□□□ 0.4
CDKN1B-203ENST00000442489 CKMP06732 381 aa17.54■□□□□ 0.4
CDKN1B-203ENST00000442489 MAP3K7CLP57077 242 aa17.54■□□□□ 0.4
CDKN1B-203ENST00000442489 SATB1Q01826 763 aa17.54■□□□□ 0.4
CDKN1B-203ENST00000442489 GCNT1Q02742 428 aa17.54■□□□□ 0.4
CDKN1B-203ENST00000442489 TNK2Q07912 1038 aa17.54■□□□□ 0.4
CDKN1B-203ENST00000442489 PON2Q15165 354 aa17.54■□□□□ 0.4
CDKN1B-203ENST00000442489 ITPRIPL2Q3MIP1 535 aa17.54■□□□□ 0.4
CDKN1B-203ENST00000442489 DGKKQ5KSL6 1271 aa17.54■□□□□ 0.4
CDKN1B-203ENST00000442489 PPP1R26Q5T8A7 1209 aaPredicted RBP17.54■□□□□ 0.4
CDKN1B-203ENST00000442489 MAMSTRQ6ZN01 415 aa17.54■□□□□ 0.4
CDKN1B-203ENST00000442489 ERMP1Q7Z2K6 904 aa17.54■□□□□ 0.4
CDKN1B-203ENST00000442489 ARL14EPQ8N8R7 260 aaPredicted RBP17.54■□□□□ 0.4
CDKN1B-203ENST00000442489 EHBP1Q8NDI1 1231 aa17.54■□□□□ 0.4
CDKN1B-203ENST00000442489 RIN3Q8TB24 985 aa17.54■□□□□ 0.4
CDKN1B-203ENST00000442489 FBXO32Q969P5 355 aa17.54■□□□□ 0.4
CDKN1B-203ENST00000442489 JAKMIP2Q96AA8 810 aa17.54■□□□□ 0.4
CDKN1B-203ENST00000442489 NT5C1BQ96P26 610 aa17.54■□□□□ 0.4
CDKN1B-203ENST00000442489 CYP2S1Q96SQ9 504 aa17.54■□□□□ 0.4
CDKN1B-203ENST00000442489 DUSP16Q9BY84 665 aa17.54■□□□□ 0.4
CDKN1B-203ENST00000442489 EPC1Q9H2F5 836 aa17.54■□□□□ 0.4
CDKN1B-203ENST00000442489 TRPC7Q9HCX4 862 aa17.54■□□□□ 0.4
CDKN1B-203ENST00000442489 RAB23Q9ULC3 237 aa17.54■□□□□ 0.4
CDKN1B-203ENST00000442489 KIAA1257Q9ULG3 409 aa17.54■□□□□ 0.4
CDKN1B-203ENST00000442489 GVINP1Q7Z2Y8 2422 aa17.54■□□□□ 0.4
CDKN1B-203ENST00000442489 MYO16Q9Y6X6 1858 aa17.54■□□□□ 0.4
CDKN1B-203ENST00000442489 VPS13AQ96RL7 3174 aa17.53■□□□□ 0.4
CDKN1B-203ENST00000442489 ADORA2BP29275 332 aa17.53■□□□□ 0.4
CDKN1B-203ENST00000442489 MTF1Q14872 753 aa17.53■□□□□ 0.4
CDKN1B-203ENST00000442489 PDGFRLQ15198 375 aa17.53■□□□□ 0.4
CDKN1B-203ENST00000442489 DPCR1Q3MIW9 517 aa17.53■□□□□ 0.4
CDKN1B-203ENST00000442489 ZNF394Q53GI3 561 aa17.53■□□□□ 0.4
CDKN1B-203ENST00000442489 CC2D1AQ6P1N0 951 aaPredicted RBP17.53■□□□□ 0.4
CDKN1B-203ENST00000442489 TXNDC11Q6PKC3 985 aa17.53■□□□□ 0.4
CDKN1B-203ENST00000442489 IRF2BP1Q8IU81 584 aa17.53■□□□□ 0.4
CDKN1B-203ENST00000442489 SPEM1Q8N4L4 309 aa17.53■□□□□ 0.4
CDKN1B-203ENST00000442489 ZNF276Q8N554 614 aa17.53■□□□□ 0.4
CDKN1B-203ENST00000442489 TTC16Q8NEE8 873 aa17.53■□□□□ 0.4
CDKN1B-203ENST00000442489 SCAMP5Q8TAC9 235 aa17.53■□□□□ 0.4
CDKN1B-203ENST00000442489 GPT2Q8TD30 523 aa17.53■□□□□ 0.4
CDKN1B-203ENST00000442489 RMDN1Q96DB5 314 aa17.53■□□□□ 0.4
CDKN1B-203ENST00000442489 CNOT6LQ96LI5 555 aaKnown RBP17.53■□□□□ 0.4
CDKN1B-203ENST00000442489 HEXIM2Q96MH2 286 aaKnown RBP17.53■□□□□ 0.4
CDKN1B-203ENST00000442489 THAP9Q9H5L6 903 aa17.53■□□□□ 0.4
CDKN1B-203ENST00000442489 GKN1Q9NS71 199 aa17.53■□□□□ 0.4
CDKN1B-203ENST00000442489 SCML2Q9UQR0 700 aa17.53■□□□□ 0.4
CDKN1B-203ENST00000442489 SPTBN4Q9H254 2564 aa17.53■□□□□ 0.4
CDKN1B-203ENST00000442489 GTPBP10A4D1E9 387 aaKnown RBP17.52■□□□□ 0.4
CDKN1B-203ENST00000442489 PAEPP09466 180 aa17.52■□□□□ 0.4
CDKN1B-203ENST00000442489 RUNX3Q13761 415 aa17.52■□□□□ 0.4
CDKN1B-203ENST00000442489 Q6ZS52 159 aa17.52■□□□□ 0.4
CDKN1B-203ENST00000442489 DDX42Q86XP3 938 aaKnown RBP eCLIP17.52■□□□□ 0.4
CDKN1B-203ENST00000442489 ANKRD52Q8NB46 1076 aa17.52■□□□□ 0.4
CDKN1B-203ENST00000442489 OSCP1Q8WVF1 389 aa17.52■□□□□ 0.4
CDKN1B-203ENST00000442489 RNF38Q9H0F5 515 aa17.52■□□□□ 0.4
CDKN1B-203ENST00000442489 HPS4Q9NQG7 708 aa17.52■□□□□ 0.4
CDKN1B-203ENST00000442489 GMEB2Q9UKD1 530 aa17.52■□□□□ 0.4
CDKN1B-203ENST00000442489 USP3Q9Y6I4 520 aa17.52■□□□□ 0.4
CDKN1B-203ENST00000442489 EP300Q09472 2414 aaPredicted RBP17.52■□□□□ 0.4
CDKN1B-203ENST00000442489 VDRP11473 427 aa17.51■□□□□ 0.39
CDKN1B-203ENST00000442489 TDGF1P13385 188 aa17.51■□□□□ 0.39
CDKN1B-203ENST00000442489 ACO1P21399 889 aaKnown RBP17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms