RNA–Protein interactions for RNA: ENST00000441725.1

CDC42BPA-207, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 2,183 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-207ENST00000441725 HOXA3O43365 443 aaPredicted RBP4.54□□□□□ -1.68
CDC42BPA-207ENST00000441725 CCNT2O60583 730 aaKnown RBP4.54□□□□□ -1.68
CDC42BPA-207ENST00000441725 TMEM63AO94886 807 aa4.54□□□□□ -1.68
CDC42BPA-207ENST00000441725 RPL13P26373 211 aaKnown RBP4.54□□□□□ -1.68
CDC42BPA-207ENST00000441725 MAPK4P31152 587 aa4.54□□□□□ -1.68
CDC42BPA-207ENST00000441725 PEX19P40855 299 aa4.54□□□□□ -1.68
CDC42BPA-207ENST00000441725 RBM5P52756 815 aaKnown RBP eCLIP4.54□□□□□ -1.68
CDC42BPA-207ENST00000441725 SLFN5Q08AF3 891 aa4.54□□□□□ -1.68
CDC42BPA-207ENST00000441725 ANKRD1Q15327 319 aa4.54□□□□□ -1.68
CDC42BPA-207ENST00000441725 CSRP2Q16527 193 aa4.54□□□□□ -1.68
CDC42BPA-207ENST00000441725 ZMAT1Q5H9K5 638 aa4.54□□□□□ -1.68
CDC42BPA-207ENST00000441725 NOMO2Q5JPE7 1267 aa4.54□□□□□ -1.68
CDC42BPA-207ENST00000441725 ATXN7L2Q5T6C5 722 aaPredicted RBP4.54□□□□□ -1.68
CDC42BPA-207ENST00000441725 TMCO3Q6UWJ1 677 aa4.54□□□□□ -1.68
CDC42BPA-207ENST00000441725 SLC30A10Q6XR72 485 aa4.54□□□□□ -1.68
CDC42BPA-207ENST00000441725 GALNT4Q8N4A0 578 aa4.54□□□□□ -1.68
CDC42BPA-207ENST00000441725 KCNG4Q8TDN1 519 aa4.54□□□□□ -1.68
CDC42BPA-207ENST00000441725 CCDC47Q96A33 483 aaKnown RBP4.54□□□□□ -1.68
CDC42BPA-207ENST00000441725 MOGAT1Q96PD6 335 aa4.54□□□□□ -1.68
CDC42BPA-207ENST00000441725 CCDC68Q9H2F9 335 aa4.54□□□□□ -1.68
CDC42BPA-207ENST00000441725 CDYLQ9Y232 598 aa4.54□□□□□ -1.68
CDC42BPA-207ENST00000441725 EIF4G1Q04637 1599 aaKnown RBP4.53□□□□□ -1.68
CDC42BPA-207ENST00000441725 POLRMTO00411 1230 aaKnown RBP4.53□□□□□ -1.68
CDC42BPA-207ENST00000441725 RGS10O43665 173 aa4.53□□□□□ -1.68
CDC42BPA-207ENST00000441725 TRIM13O60858 407 aa4.53□□□□□ -1.68
CDC42BPA-207ENST00000441725 FCER1AP12319 257 aa4.53□□□□□ -1.68
CDC42BPA-207ENST00000441725 MYCLP12524 364 aaPredicted RBP4.53□□□□□ -1.68
CDC42BPA-207ENST00000441725 AKR1B1P15121 316 aa4.53□□□□□ -1.68
CDC42BPA-207ENST00000441725 NTSR1P30989 418 aa4.53□□□□□ -1.68
CDC42BPA-207ENST00000441725 DLG4P78352 724 aa4.53□□□□□ -1.68
CDC42BPA-207ENST00000441725 FHL3Q13643 280 aa4.53□□□□□ -1.68
CDC42BPA-207ENST00000441725 RNF151Q2KHN1 245 aa4.53□□□□□ -1.68
CDC42BPA-207ENST00000441725 CTXN3Q4LDR2 81 aa4.53□□□□□ -1.68
CDC42BPA-207ENST00000441725 CFAP52Q8N1V2 620 aa4.53□□□□□ -1.68
CDC42BPA-207ENST00000441725 LSM14AQ8ND56 463 aaKnown RBP4.53□□□□□ -1.68
CDC42BPA-207ENST00000441725 STAMQ92783 540 aa4.53□□□□□ -1.68
CDC42BPA-207ENST00000441725 MCRS1Q96EZ8 462 aa4.53□□□□□ -1.68
CDC42BPA-207ENST00000441725 TIGD1Q96MW7 591 aa4.53□□□□□ -1.68
CDC42BPA-207ENST00000441725 KCNK12Q9HB15 430 aa4.53□□□□□ -1.68
CDC42BPA-207ENST00000441725 VSX1Q9NZR4 365 aaPredicted RBP4.53□□□□□ -1.68
CDC42BPA-207ENST00000441725 SHOC2Q9UQ13 582 aa4.53□□□□□ -1.68
CDC42BPA-207ENST00000441725 PMF1-BGLAPU3KQ54 211 aa4.53□□□□□ -1.68
CDC42BPA-207ENST00000441725 ERCC6Q03468 1493 aa4.53□□□□□ -1.68
CDC42BPA-207ENST00000441725 RSF1Q96T23 1441 aaPredicted RBP4.53□□□□□ -1.68
CDC42BPA-207ENST00000441725 URI1O94763 535 aaPredicted RBP4.53□□□□□ -1.68
CDC42BPA-207ENST00000441725 CER1O95813 267 aa4.53□□□□□ -1.68
CDC42BPA-207ENST00000441725 RPN1P04843 607 aaKnown RBP4.53□□□□□ -1.68
CDC42BPA-207ENST00000441725 HGFP14210 728 aa4.53□□□□□ -1.68
CDC42BPA-207ENST00000441725 CPA1P15085 419 aa4.53□□□□□ -1.68
CDC42BPA-207ENST00000441725 KCNA3P22001 575 aa4.53□□□□□ -1.68
CDC42BPA-207ENST00000441725 CHMP24386 653 aa4.53□□□□□ -1.68
CDC42BPA-207ENST00000441725 HOXD13P35453 343 aa4.53□□□□□ -1.68
CDC42BPA-207ENST00000441725 ACTN2P35609 894 aa4.53□□□□□ -1.68
CDC42BPA-207ENST00000441725 PXNP49023 591 aaPredicted RBP4.53□□□□□ -1.68
CDC42BPA-207ENST00000441725 DGKEP52429 567 aa4.53□□□□□ -1.68
CDC42BPA-207ENST00000441725 WASHC5Q12768 1159 aa4.53□□□□□ -1.68
CDC42BPA-207ENST00000441725 GPR68Q15743 365 aa4.53□□□□□ -1.68
CDC42BPA-207ENST00000441725 CFAP58Q5T655 872 aa4.53□□□□□ -1.68
CDC42BPA-207ENST00000441725 MFSD4BQ5TF39 518 aa4.53□□□□□ -1.68
CDC42BPA-207ENST00000441725 MFSD5Q6N075 450 aa4.53□□□□□ -1.68
CDC42BPA-207ENST00000441725 TMTC3Q6ZXV5 915 aa4.53□□□□□ -1.68
CDC42BPA-207ENST00000441725 H1FNTQ75WM6 255 aaPredicted RBP4.53□□□□□ -1.68
CDC42BPA-207ENST00000441725 ZSWIM9Q86XI8 627 aa4.53□□□□□ -1.68
CDC42BPA-207ENST00000441725 ARMC8Q8IUR7 673 aa4.53□□□□□ -1.68
CDC42BPA-207ENST00000441725 PSD4Q8NDX1 1056 aa4.53□□□□□ -1.68
CDC42BPA-207ENST00000441725 DNAJB14Q8TBM8 379 aa4.53□□□□□ -1.68
CDC42BPA-207ENST00000441725 CREB3L4Q8TEY5 395 aa4.53□□□□□ -1.68
CDC42BPA-207ENST00000441725 FNIP1Q8TF40 1166 aa4.53□□□□□ -1.68
CDC42BPA-207ENST00000441725 WDR60Q8WVS4 1066 aa4.53□□□□□ -1.68
CDC42BPA-207ENST00000441725 HMGB4Q8WW32 186 aa4.53□□□□□ -1.68
CDC42BPA-207ENST00000441725 RABGGTAQ92696 567 aa4.53□□□□□ -1.68
CDC42BPA-207ENST00000441725 TFAP2CQ92754 450 aa4.53□□□□□ -1.68
CDC42BPA-207ENST00000441725 PPP2R3CQ969Q6 453 aa4.53□□□□□ -1.68
CDC42BPA-207ENST00000441725 LRIG1Q96JA1 1093 aa4.53□□□□□ -1.68
CDC42BPA-207ENST00000441725 TRIB1Q96RU8 372 aa4.53□□□□□ -1.68
CDC42BPA-207ENST00000441725 MECRQ9BV79 373 aa4.53□□□□□ -1.68
CDC42BPA-207ENST00000441725 MCOLN1Q9GZU1 580 aa4.53□□□□□ -1.68
CDC42BPA-207ENST00000441725 SMOC2Q9H3U7 446 aa4.53□□□□□ -1.68
CDC42BPA-207ENST00000441725 CXorf36Q9H7Y0 433 aa4.53□□□□□ -1.68
CDC42BPA-207ENST00000441725 UNKLQ9H9P5 680 aaKnown RBP4.53□□□□□ -1.68
CDC42BPA-207ENST00000441725 NDUFAF4Q9P032 175 aa4.53□□□□□ -1.68
CDC42BPA-207ENST00000441725 STK26Q9P289 416 aa4.53□□□□□ -1.68
CDC42BPA-207ENST00000441725 DNAJB11Q9UBS4 358 aa4.53□□□□□ -1.68
CDC42BPA-207ENST00000441725 VPS51Q9UID3 782 aa4.53□□□□□ -1.68
CDC42BPA-207ENST00000441725 VPS28Q9UK41 221 aa4.53□□□□□ -1.68
CDC42BPA-207ENST00000441725 ADAM29Q9UKF5 820 aa4.53□□□□□ -1.68
CDC42BPA-207ENST00000441725 TDRD9Q8NDG6 1382 aaKnown RBP4.52□□□□□ -1.69
CDC42BPA-207ENST00000441725 FER1L4A9Z1Z3 1794 aa4.52□□□□□ -1.69
CDC42BPA-207ENST00000441725 H3BNC9 293 aa4.52□□□□□ -1.69
CDC42BPA-207ENST00000441725 KIAA0355O15063 1070 aa4.52□□□□□ -1.69
CDC42BPA-207ENST00000441725 P4HA2O15460 535 aa4.52□□□□□ -1.69
CDC42BPA-207ENST00000441725 HMMRO75330 724 aa4.52□□□□□ -1.69
CDC42BPA-207ENST00000441725 PTP4A3O75365 173 aa4.52□□□□□ -1.69
CDC42BPA-207ENST00000441725 TFRCP02786 760 aaKnown RBP4.52□□□□□ -1.69
CDC42BPA-207ENST00000441725 ATXN1LP0C7T5 689 aaKnown RBP4.52□□□□□ -1.69
CDC42BPA-207ENST00000441725 GLULP15104 373 aa4.52□□□□□ -1.69
CDC42BPA-207ENST00000441725 YY1P25490 414 aa4.52□□□□□ -1.69
CDC42BPA-207ENST00000441725 MYO1EQ12965 1108 aa4.52□□□□□ -1.69
CDC42BPA-207ENST00000441725 KCNMB1Q16558 191 aa4.52□□□□□ -1.69
CDC42BPA-207ENST00000441725 ZNF484Q5JVG2 852 aa4.52□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms