RNA–Protein interactions for RNA: ENST00000439706.5

SLC38A1-202, Transcript of solute carrier family 38 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC38A1, Length 3,436 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A1-202ENST00000439706 STX3Q13277 289 aa12.92□□□□□ -0.34
SLC38A1-202ENST00000439706 TTLL12Q14166 644 aaPredicted RBP12.92□□□□□ -0.34
SLC38A1-202ENST00000439706 NFIL3Q16649 462 aa12.92□□□□□ -0.34
SLC38A1-202ENST00000439706 EFHC1Q5JVL4 640 aa12.92□□□□□ -0.34
SLC38A1-202ENST00000439706 RNF111Q6ZNA4 994 aa12.92□□□□□ -0.34
SLC38A1-202ENST00000439706 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.92□□□□□ -0.34
SLC38A1-202ENST00000439706 DNAAF2Q9NVR5 837 aaKnown RBP12.92□□□□□ -0.34
SLC38A1-202ENST00000439706 RBAKQ9NYW8 714 aaPredicted RBP12.92□□□□□ -0.34
SLC38A1-202ENST00000439706 ZNRF3Q9ULT6 936 aa12.92□□□□□ -0.34
SLC38A1-202ENST00000439706 FZD1Q9UP38 647 aa12.92□□□□□ -0.34
SLC38A1-202ENST00000439706 SHOC2Q9UQ13 582 aa12.92□□□□□ -0.34
SLC38A1-202ENST00000439706 MRPL11Q9Y3B7 192 aaKnown RBP12.92□□□□□ -0.34
SLC38A1-202ENST00000439706 SPATA31A5Q5VU36 1347 aa12.92□□□□□ -0.34
SLC38A1-202ENST00000439706 SPATA31A7Q8IWB4 1347 aa12.92□□□□□ -0.34
SLC38A1-202ENST00000439706 FOXD2O60548 495 aaPredicted RBP12.91□□□□□ -0.34
SLC38A1-202ENST00000439706 CDKN2BP42772 138 aa12.91□□□□□ -0.34
SLC38A1-202ENST00000439706 RAP1GAPP47736 663 aa12.91□□□□□ -0.34
SLC38A1-202ENST00000439706 TFAMQ00059 246 aaKnown RBP12.91□□□□□ -0.34
SLC38A1-202ENST00000439706 ZC3H12AQ5D1E8 599 aaKnown RBP12.91□□□□□ -0.34
SLC38A1-202ENST00000439706 DPY19L2Q6NUT2 758 aa12.91□□□□□ -0.34
SLC38A1-202ENST00000439706 ANO5Q75V66 913 aa12.91□□□□□ -0.34
SLC38A1-202ENST00000439706 DHDDSQ86SQ9 333 aa12.91□□□□□ -0.34
SLC38A1-202ENST00000439706 TDRPQ86YL5 185 aa12.91□□□□□ -0.34
SLC38A1-202ENST00000439706 GSDMBQ8TAX9 411 aa12.91□□□□□ -0.34
SLC38A1-202ENST00000439706 USP13Q92995 863 aaPredicted RBP12.91□□□□□ -0.34
SLC38A1-202ENST00000439706 PRMT6Q96LA8 375 aaPredicted RBP12.91□□□□□ -0.34
SLC38A1-202ENST00000439706 STRA6Q9BX79 667 aa12.91□□□□□ -0.34
SLC38A1-202ENST00000439706 WWP1Q9H0M0 922 aa12.91□□□□□ -0.34
SLC38A1-202ENST00000439706 PCDH9Q9HC56 1237 aa12.91□□□□□ -0.34
SLC38A1-202ENST00000439706 PNPOQ9NVS9 261 aa12.91□□□□□ -0.34
SLC38A1-202ENST00000439706 CHCHD3Q9NX63 227 aaKnown RBP12.91□□□□□ -0.34
SLC38A1-202ENST00000439706 PLA2G4CQ9UP65 541 aa12.91□□□□□ -0.34
SLC38A1-202ENST00000439706 INPP5FQ9Y2H2 1132 aa12.91□□□□□ -0.34
SLC38A1-202ENST00000439706 SCINQ9Y6U3 715 aa12.91□□□□□ -0.34
SLC38A1-202ENST00000439706 NOP56O00567 594 aaKnown RBP12.91□□□□□ -0.34
SLC38A1-202ENST00000439706 XPO1O14980 1071 aaKnown RBP12.91□□□□□ -0.34
SLC38A1-202ENST00000439706 KCNN4O15554 427 aa12.91□□□□□ -0.34
SLC38A1-202ENST00000439706 HNRNPCL1O60812 293 aaKnown RBP12.91□□□□□ -0.34
SLC38A1-202ENST00000439706 ASTN2O75129 1339 aaPredicted RBP12.91□□□□□ -0.34
SLC38A1-202ENST00000439706 BBOX1O75936 387 aa12.91□□□□□ -0.34
SLC38A1-202ENST00000439706 VIL1P09327 827 aaKnown RBP12.91□□□□□ -0.34
SLC38A1-202ENST00000439706 PMLP29590 882 aa12.91□□□□□ -0.34
SLC38A1-202ENST00000439706 FOLH1Q04609 750 aa12.91□□□□□ -0.34
SLC38A1-202ENST00000439706 PDK1Q15118 436 aa12.91□□□□□ -0.34
SLC38A1-202ENST00000439706 OASLQ15646 514 aaKnown RBP12.91□□□□□ -0.34
SLC38A1-202ENST00000439706 TRMT5Q32P41 509 aaKnown RBP12.91□□□□□ -0.34
SLC38A1-202ENST00000439706 CES3Q6UWW8 571 aa12.91□□□□□ -0.34
SLC38A1-202ENST00000439706 LCA5Q86VQ0 697 aa12.91□□□□□ -0.34
SLC38A1-202ENST00000439706 ICA1LQ8NDH6 482 aa12.91□□□□□ -0.34
SLC38A1-202ENST00000439706 VTI1AQ96AJ9 217 aa12.91□□□□□ -0.34
SLC38A1-202ENST00000439706 TRIM11Q96F44 468 aa12.91□□□□□ -0.34
SLC38A1-202ENST00000439706 CEP41Q9BYV8 373 aa12.91□□□□□ -0.34
SLC38A1-202ENST00000439706 COA1Q9GZY4 146 aa12.91□□□□□ -0.34
SLC38A1-202ENST00000439706 EHMT1Q9H9B1 1298 aa12.91□□□□□ -0.34
SLC38A1-202ENST00000439706 AVENQ9NQS1 362 aaPredicted RBP12.91□□□□□ -0.34
SLC38A1-202ENST00000439706 UBE4BO95155 1302 aa12.91□□□□□ -0.34
SLC38A1-202ENST00000439706 MCF2LO15068 1137 aa12.91□□□□□ -0.34
SLC38A1-202ENST00000439706 SERPINB5P36952 375 aa12.91□□□□□ -0.34
SLC38A1-202ENST00000439706 AOC3Q16853 763 aa12.91□□□□□ -0.34
SLC38A1-202ENST00000439706 TKFCQ3LXA3 575 aa12.91□□□□□ -0.34
SLC38A1-202ENST00000439706 IMPG2Q9BZV3 1241 aa12.91□□□□□ -0.34
SLC38A1-202ENST00000439706 AGO2Q9UKV8 859 aaKnown RBP12.91□□□□□ -0.34
SLC38A1-202ENST00000439706 APOBEC2Q9Y235 224 aaKnown RBP12.91□□□□□ -0.34
SLC38A1-202ENST00000439706 MAST2Q6P0Q8 1798 aa12.9□□□□□ -0.34
SLC38A1-202ENST00000439706 CCDC78A2IDD5 438 aa12.9□□□□□ -0.34
SLC38A1-202ENST00000439706 A8MXQ7 604 aa12.9□□□□□ -0.34
SLC38A1-202ENST00000439706 KRT3P12035 628 aa12.9□□□□□ -0.34
SLC38A1-202ENST00000439706 TPP2P29144 1249 aaPredicted RBP12.9□□□□□ -0.34
SLC38A1-202ENST00000439706 GRIA1P42261 906 aa12.9□□□□□ -0.34
SLC38A1-202ENST00000439706 PGGT1BP53609 377 aa12.9□□□□□ -0.34
SLC38A1-202ENST00000439706 CDH8P55286 799 aa12.9□□□□□ -0.34
SLC38A1-202ENST00000439706 PKNOX1P55347 436 aa12.9□□□□□ -0.34
SLC38A1-202ENST00000439706 PSMC1P62191 440 aaKnown RBP12.9□□□□□ -0.34
SLC38A1-202ENST00000439706 DPYSL3Q14195 570 aa12.9□□□□□ -0.34
SLC38A1-202ENST00000439706 R3HDM1Q15032 1099 aaKnown RBP12.9□□□□□ -0.34
SLC38A1-202ENST00000439706 TATDN1Q6P1N9 297 aa12.9□□□□□ -0.34
SLC38A1-202ENST00000439706 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.9□□□□□ -0.34
SLC38A1-202ENST00000439706 IWS1Q96ST2 819 aa12.9□□□□□ -0.34
SLC38A1-202ENST00000439706 FAM192AQ9GZU8 254 aa12.9□□□□□ -0.34
SLC38A1-202ENST00000439706 S100A14Q9HCY8 104 aa12.9□□□□□ -0.34
SLC38A1-202ENST00000439706 PLIN4Q96Q06 1357 aa12.9□□□□□ -0.34
SLC38A1-202ENST00000439706 A0A1B0GTW7 788 aa12.9□□□□□ -0.34
SLC38A1-202ENST00000439706 TMEM191CA6NGB0 347 aa12.9□□□□□ -0.34
SLC38A1-202ENST00000439706 TBC1D12O60347 775 aa12.9□□□□□ -0.34
SLC38A1-202ENST00000439706 KRT37O76014 449 aa12.9□□□□□ -0.34
SLC38A1-202ENST00000439706 CLPTM1O96005 669 aa12.9□□□□□ -0.34
SLC38A1-202ENST00000439706 CCNE2O96020 404 aa12.9□□□□□ -0.34
SLC38A1-202ENST00000439706 TMEM191BP0C7N4 346 aa12.9□□□□□ -0.34
SLC38A1-202ENST00000439706 CNGA3Q16281 694 aa12.9□□□□□ -0.34
SLC38A1-202ENST00000439706 NME8Q8N427 588 aa12.9□□□□□ -0.34
SLC38A1-202ENST00000439706 STRIP2Q9ULQ0 834 aa12.9□□□□□ -0.34
SLC38A1-202ENST00000439706 SOX13Q9UN79 622 aa12.9□□□□□ -0.34
SLC38A1-202ENST00000439706 SNCAIPQ9Y6H5 919 aa12.9□□□□□ -0.34
SLC38A1-202ENST00000439706 ZNF541Q9H0D2 1346 aa12.9□□□□□ -0.35
SLC38A1-202ENST00000439706 A0A088AWK7 358 aa12.9□□□□□ -0.35
SLC38A1-202ENST00000439706 ATP6V1G1O75348 118 aa12.9□□□□□ -0.35
SLC38A1-202ENST00000439706 GTF2A2P52657 109 aa12.9□□□□□ -0.35
SLC38A1-202ENST00000439706 CDH6P55285 790 aa12.9□□□□□ -0.35
SLC38A1-202ENST00000439706 MRPS22P82650 360 aaKnown RBP12.9□□□□□ -0.35
SLC38A1-202ENST00000439706 MYBPC3Q14896 1274 aa12.9□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms