RNA–Protein interactions for RNA: ENST00000438213.5

CTSD-205, Transcript of cathepsin D, humanhuman

TSL 2

Gene CTSD, Length 946 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-205ENST00000438213 KLHDC7AQ5VTJ3 777 aa17.26■□□□□ 0.35
CTSD-205ENST00000438213 HFE2Q6ZVN8 426 aa17.26■□□□□ 0.35
CTSD-205ENST00000438213 GPRIN1Q7Z2K8 1008 aa17.26■□□□□ 0.35
CTSD-205ENST00000438213 TTC30AQ86WT1 665 aa17.26■□□□□ 0.35
CTSD-205ENST00000438213 SUGP1Q8IWZ8 645 aaKnown RBP17.26■□□□□ 0.35
CTSD-205ENST00000438213 FBXL6Q8N531 539 aa17.26■□□□□ 0.35
CTSD-205ENST00000438213 CSGALNACT1Q8TDX6 532 aa17.26■□□□□ 0.35
CTSD-205ENST00000438213 SHC3Q92529 594 aa17.26■□□□□ 0.35
CTSD-205ENST00000438213 RSPRY1Q96DX4 576 aa17.26■□□□□ 0.35
CTSD-205ENST00000438213 SLC22A12Q96S37 553 aa17.26■□□□□ 0.35
CTSD-205ENST00000438213 LSM14BQ9BX40 385 aaKnown RBP17.26■□□□□ 0.35
CTSD-205ENST00000438213 LRRC4Q9HBW1 653 aa17.26■□□□□ 0.35
CTSD-205ENST00000438213 GMIPQ9P107 970 aa17.26■□□□□ 0.35
CTSD-205ENST00000438213 CA14Q9ULX7 337 aa17.26■□□□□ 0.35
CTSD-205ENST00000438213 WDR3Q9UNX4 943 aaKnown RBP eCLIP17.26■□□□□ 0.35
CTSD-205ENST00000438213 USP3Q9Y6I4 520 aa17.26■□□□□ 0.35
CTSD-205ENST00000438213 OAS1P00973 400 aaKnown RBP17.25■□□□□ 0.35
CTSD-205ENST00000438213 TUBP50607 506 aa17.25■□□□□ 0.35
CTSD-205ENST00000438213 BPIFB4P59827 614 aa17.25■□□□□ 0.35
CTSD-205ENST00000438213 TPM4P67936 248 aa17.25■□□□□ 0.35
CTSD-205ENST00000438213 SLC7A9P82251 487 aa17.25■□□□□ 0.35
CTSD-205ENST00000438213 UBXN1Q04323 297 aa17.25■□□□□ 0.35
CTSD-205ENST00000438213 PRKCQQ04759 706 aa17.25■□□□□ 0.35
CTSD-205ENST00000438213 PTK2Q05397 1052 aa17.25■□□□□ 0.35
CTSD-205ENST00000438213 ZSCAN23Q3MJ62 389 aa17.25■□□□□ 0.35
CTSD-205ENST00000438213 RAB41Q5JT25 222 aa17.25■□□□□ 0.35
CTSD-205ENST00000438213 CCDC186Q7Z3E2 898 aa17.25■□□□□ 0.35
CTSD-205ENST00000438213 DHX40Q8IX18 779 aaKnown RBP17.25■□□□□ 0.35
CTSD-205ENST00000438213 ARHGAP18Q8N392 663 aa17.25■□□□□ 0.35
CTSD-205ENST00000438213 LRRC3BQ96PB8 259 aa17.25■□□□□ 0.35
CTSD-205ENST00000438213 NACA2Q9H009 215 aa17.25■□□□□ 0.35
CTSD-205ENST00000438213 RNF38Q9H0F5 515 aa17.25■□□□□ 0.35
CTSD-205ENST00000438213 PLCB1Q9NQ66 1216 aa17.25■□□□□ 0.35
CTSD-205ENST00000438213 ARHGEF3Q9NR81 526 aa17.25■□□□□ 0.35
CTSD-205ENST00000438213 ARHGAP26Q9UNA1 814 aa17.25■□□□□ 0.35
CTSD-205ENST00000438213 CCL26Q9Y258 94 aa17.25■□□□□ 0.35
CTSD-205ENST00000438213 DENND4CQ5VZ89 1909 aa17.25■□□□□ 0.35
CTSD-205ENST00000438213 LGALS16A8MUM7 142 aa17.24■□□□□ 0.35
CTSD-205ENST00000438213 M0QYV0 167 aa17.24■□□□□ 0.35
CTSD-205ENST00000438213 FOXN3O00409 490 aaPredicted RBP17.24■□□□□ 0.35
CTSD-205ENST00000438213 THAP12O43422 761 aa17.24■□□□□ 0.35
CTSD-205ENST00000438213 MBL2P11226 248 aaPredicted RBP17.24■□□□□ 0.35
CTSD-205ENST00000438213 RALAP11233 206 aa17.24■□□□□ 0.35
CTSD-205ENST00000438213 GLULP15104 373 aa17.24■□□□□ 0.35
CTSD-205ENST00000438213 UCHL3P15374 230 aa17.24■□□□□ 0.35
CTSD-205ENST00000438213 TCF3P15923 654 aa17.24■□□□□ 0.35
CTSD-205ENST00000438213 GNA15P30679 374 aa17.24■□□□□ 0.35
CTSD-205ENST00000438213 PLA2G4AP47712 749 aa17.24■□□□□ 0.35
CTSD-205ENST00000438213 TKTL1P51854 596 aa17.24■□□□□ 0.35
CTSD-205ENST00000438213 RAPGEF1Q13905 1077 aa17.24■□□□□ 0.35
CTSD-205ENST00000438213 FILIP1LQ4L180 1135 aa17.24■□□□□ 0.35
CTSD-205ENST00000438213 PKDCCQ504Y2 493 aa17.24■□□□□ 0.35
CTSD-205ENST00000438213 TADA2BQ86TJ2 420 aa17.24■□□□□ 0.35
CTSD-205ENST00000438213 DDX42Q86XP3 938 aaKnown RBP eCLIP17.24■□□□□ 0.35
CTSD-205ENST00000438213 SH3RF2Q8TEC5 729 aa17.24■□□□□ 0.35
CTSD-205ENST00000438213 SLC35F5Q8WV83 523 aa17.24■□□□□ 0.35
CTSD-205ENST00000438213 ZNF606Q8WXB4 792 aa17.24■□□□□ 0.35
CTSD-205ENST00000438213 KCTD13Q8WZ19 329 aa17.24■□□□□ 0.35
CTSD-205ENST00000438213 PCMTD1Q96MG8 357 aaPredicted RBP17.24■□□□□ 0.35
CTSD-205ENST00000438213 CDK5RAP1Q96SZ6 601 aaKnown RBP17.24■□□□□ 0.35
CTSD-205ENST00000438213 HSD3B7Q9H2F3 369 aa17.24■□□□□ 0.35
CTSD-205ENST00000438213 GKN1Q9NS71 199 aa17.24■□□□□ 0.35
CTSD-205ENST00000438213 DAAM1Q9Y4D1 1078 aa17.24■□□□□ 0.35
CTSD-205ENST00000438213 ZNF638Q14966 1978 aaKnown RBP17.24■□□□□ 0.35
CTSD-205ENST00000438213 KRBA1A5PL33 1030 aa17.23■□□□□ 0.35
CTSD-205ENST00000438213 CYP26A1O43174 497 aa17.23■□□□□ 0.35
CTSD-205ENST00000438213 OLFM2O95897 454 aa17.23■□□□□ 0.35
CTSD-205ENST00000438213 ZBED1O96006 694 aa17.23■□□□□ 0.35
CTSD-205ENST00000438213 ATP5C1P36542 298 aaKnown RBP17.23■□□□□ 0.35
CTSD-205ENST00000438213 CLCN5P51795 746 aa17.23■□□□□ 0.35
CTSD-205ENST00000438213 MLLT6P55198 1093 aaPredicted RBP17.23■□□□□ 0.35
CTSD-205ENST00000438213 STARD6P59095 220 aa17.23■□□□□ 0.35
CTSD-205ENST00000438213 DRAP1Q14919 205 aaPredicted RBP17.23■□□□□ 0.35
CTSD-205ENST00000438213 IQCB1Q15051 598 aa17.23■□□□□ 0.35
CTSD-205ENST00000438213 MLF2Q15773 248 aaPredicted RBP17.23■□□□□ 0.35
CTSD-205ENST00000438213 MEA1Q16626 185 aa17.23■□□□□ 0.35
CTSD-205ENST00000438213 DPY19L2P1Q6NXN4 242 aa17.23■□□□□ 0.35
CTSD-205ENST00000438213 SIX6OS1Q8N1H7 587 aa17.23■□□□□ 0.35
CTSD-205ENST00000438213 ZNF276Q8N554 614 aa17.23■□□□□ 0.35
CTSD-205ENST00000438213 KIAA1958Q8N8K9 716 aa17.23■□□□□ 0.35
CTSD-205ENST00000438213 TTC16Q8NEE8 873 aa17.23■□□□□ 0.35
CTSD-205ENST00000438213 FLCNQ8NFG4 579 aa17.23■□□□□ 0.35
CTSD-205ENST00000438213 SECISBP2LQ93073 1101 aaKnown RBP17.23■□□□□ 0.35
CTSD-205ENST00000438213 HSFY1Q96LI6 401 aa17.23■□□□□ 0.35
CTSD-205ENST00000438213 NELL2Q99435 816 aa17.23■□□□□ 0.35
CTSD-205ENST00000438213 ZSWIM1Q9BR11 485 aa17.23■□□□□ 0.35
CTSD-205ENST00000438213 STK33Q9BYT3 514 aa17.23■□□□□ 0.35
CTSD-205ENST00000438213 NAGPAQ9UK23 515 aa17.23■□□□□ 0.35
CTSD-205ENST00000438213 TRIOO75962 3097 aa17.23■□□□□ 0.35
CTSD-205ENST00000438213 A0A1W2PQH9 124 aa17.22■□□□□ 0.35
CTSD-205ENST00000438213 TULP2O00295 520 aa17.22■□□□□ 0.35
CTSD-205ENST00000438213 MAN2B1O00754 1011 aa17.22■□□□□ 0.35
CTSD-205ENST00000438213 COCHO43405 550 aa17.22■□□□□ 0.35
CTSD-205ENST00000438213 TLR5O60602 858 aa17.22■□□□□ 0.35
CTSD-205ENST00000438213 PDGFBP01127 241 aaPredicted RBP17.22■□□□□ 0.35
CTSD-205ENST00000438213 CALCAP01258 141 aa17.22■□□□□ 0.35
CTSD-205ENST00000438213 ATP1A3P13637 1013 aa17.22■□□□□ 0.35
CTSD-205ENST00000438213 KPNA1P52294 538 aaPredicted RBP17.22■□□□□ 0.35
CTSD-205ENST00000438213 MTF1Q14872 753 aa17.22■□□□□ 0.35
CTSD-205ENST00000438213 PDGFRLQ15198 375 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms