RNA–Protein interactions for RNA: ENST00000435039.3

PCOTH-203, Transcript of Pro-X-Gly collagen triple helix like repeat containing, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCOTH, Length 542 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCOTH-203ENST00000435039 SSX2IPQ9Y2D8 614 aa11.91□□□□□ -0.5
PCOTH-203ENST00000435039 ALG6Q9Y672 507 aa11.91□□□□□ -0.5
PCOTH-203ENST00000435039 CDY1Q9Y6F8 540 aa11.91□□□□□ -0.5
PCOTH-203ENST00000435039 REV3LO60673 3130 aa11.91□□□□□ -0.5
PCOTH-203ENST00000435039 CCDC66A2RUB6 948 aa11.9□□□□□ -0.5
PCOTH-203ENST00000435039 C2CD4BA6NLJ0 364 aa11.9□□□□□ -0.5
PCOTH-203ENST00000435039 TMEM110-MUSTN1A8MSY1 372 aa11.9□□□□□ -0.5
PCOTH-203ENST00000435039 F8VP50 259 aa11.9□□□□□ -0.5
PCOTH-203ENST00000435039 PIK3R2O00459 728 aa11.9□□□□□ -0.5
PCOTH-203ENST00000435039 NCK2O43639 380 aa11.9□□□□□ -0.5
PCOTH-203ENST00000435039 DAB1O75553 588 aa11.9□□□□□ -0.5
PCOTH-203ENST00000435039 GABBR2O75899 941 aa11.9□□□□□ -0.5
PCOTH-203ENST00000435039 FGF18O76093 207 aa11.9□□□□□ -0.5
PCOTH-203ENST00000435039 GJB6O95452 261 aa11.9□□□□□ -0.5
PCOTH-203ENST00000435039 LCP1P13796 627 aa11.9□□□□□ -0.5
PCOTH-203ENST00000435039 GPD1P21695 349 aa11.9□□□□□ -0.5
PCOTH-203ENST00000435039 COMTP21964 271 aa11.9□□□□□ -0.5
PCOTH-203ENST00000435039 TKTL1P51854 596 aa11.9□□□□□ -0.5
PCOTH-203ENST00000435039 ROR1Q01973 937 aa11.9□□□□□ -0.5
PCOTH-203ENST00000435039 OGDHQ02218 1023 aa11.9□□□□□ -0.5
PCOTH-203ENST00000435039 KRT17Q04695 432 aa11.9□□□□□ -0.5
PCOTH-203ENST00000435039 ACAP1Q15027 740 aa11.9□□□□□ -0.5
PCOTH-203ENST00000435039 WHAMMP3Q1A5X7 153 aa11.9□□□□□ -0.5
PCOTH-203ENST00000435039 EFHC1Q5JVL4 640 aa11.9□□□□□ -0.5
PCOTH-203ENST00000435039 PRSS55Q6UWB4 352 aaPredicted RBP11.9□□□□□ -0.5
PCOTH-203ENST00000435039 RSPO2Q6UXX9 243 aaPredicted RBP11.9□□□□□ -0.5
PCOTH-203ENST00000435039 UBL4BQ8N7F7 174 aa11.9□□□□□ -0.5
PCOTH-203ENST00000435039 JOSD2Q8TAC2 188 aa11.9□□□□□ -0.5
PCOTH-203ENST00000435039 IRGQQ8WZA9 623 aa11.9□□□□□ -0.5
PCOTH-203ENST00000435039 OSBPL9Q96SU4 736 aa11.9□□□□□ -0.5
PCOTH-203ENST00000435039 TRIM62Q9BVG3 475 aa11.9□□□□□ -0.5
PCOTH-203ENST00000435039 CARD9Q9H257 536 aa11.9□□□□□ -0.5
PCOTH-203ENST00000435039 HSFX1Q9UBD0 423 aa11.9□□□□□ -0.5
PCOTH-203ENST00000435039 WDR27A2RRH5 827 aa11.89□□□□□ -0.51
PCOTH-203ENST00000435039 LCHNA4D1U4 455 aa11.89□□□□□ -0.51
PCOTH-203ENST00000435039 DDX3YO15523 660 aaKnown RBP11.89□□□□□ -0.51
PCOTH-203ENST00000435039 CTSAP10619 480 aa11.89□□□□□ -0.51
PCOTH-203ENST00000435039 CYP2F1P24903 491 aa11.89□□□□□ -0.51
PCOTH-203ENST00000435039 PSMA2P25787 234 aa11.89□□□□□ -0.51
PCOTH-203ENST00000435039 CTNNB1P35222 781 aa11.89□□□□□ -0.51
PCOTH-203ENST00000435039 RFC1P35251 1148 aaPredicted RBP11.89□□□□□ -0.51
PCOTH-203ENST00000435039 PTPN9P43378 593 aa11.89□□□□□ -0.51
PCOTH-203ENST00000435039 ZNF143P52747 638 aaPredicted RBP11.89□□□□□ -0.51
PCOTH-203ENST00000435039 SLC5A3P53794 718 aa11.89□□□□□ -0.51
PCOTH-203ENST00000435039 DAOAP59103 153 aa11.89□□□□□ -0.51
PCOTH-203ENST00000435039 MRPS5P82675 430 aaKnown RBP11.89□□□□□ -0.51
PCOTH-203ENST00000435039 UBE3AQ05086 875 aa11.89□□□□□ -0.51
PCOTH-203ENST00000435039 CKAP4Q07065 602 aaKnown RBP11.89□□□□□ -0.51
PCOTH-203ENST00000435039 TPGS2Q68CL5 300 aa11.89□□□□□ -0.51
PCOTH-203ENST00000435039 GPRIN1Q7Z2K8 1008 aa11.89□□□□□ -0.51
PCOTH-203ENST00000435039 VPS52Q8N1B4 723 aa11.89□□□□□ -0.51
PCOTH-203ENST00000435039 CLEC4CQ8WTT0 213 aa11.89□□□□□ -0.51
PCOTH-203ENST00000435039 SAMD11Q96NU1 681 aa11.89□□□□□ -0.51
PCOTH-203ENST00000435039 KCNK16Q96T55 309 aa11.89□□□□□ -0.51
PCOTH-203ENST00000435039 NCAPGQ9BPX3 1015 aa11.89□□□□□ -0.51
PCOTH-203ENST00000435039 CNPY3Q9BT09 278 aa11.89□□□□□ -0.51
PCOTH-203ENST00000435039 ULBP1Q9BZM6 244 aa11.89□□□□□ -0.51
PCOTH-203ENST00000435039 MRPL17Q9NRX2 175 aaKnown RBP11.89□□□□□ -0.51
PCOTH-203ENST00000435039 FNIP2Q9P278 1114 aa11.89□□□□□ -0.51
PCOTH-203ENST00000435039 AFF4Q9UHB7 1163 aaKnown RBP11.89□□□□□ -0.51
PCOTH-203ENST00000435039 MAFFQ9ULX9 164 aa11.89□□□□□ -0.51
PCOTH-203ENST00000435039 PACSIN2Q9UNF0 486 aaPredicted RBP11.89□□□□□ -0.51
PCOTH-203ENST00000435039 USP3Q9Y6I4 520 aa11.89□□□□□ -0.51
PCOTH-203ENST00000435039 GREB1Q4ZG55 1949 aa11.89□□□□□ -0.51
PCOTH-203ENST00000435039 LINC01553A4QN01 128 aa11.88□□□□□ -0.51
PCOTH-203ENST00000435039 C5orf67F2Z3F1 127 aa11.88□□□□□ -0.51
PCOTH-203ENST00000435039 KCNK3O14649 394 aa11.88□□□□□ -0.51
PCOTH-203ENST00000435039 TNFRSF10BO14763 440 aa11.88□□□□□ -0.51
PCOTH-203ENST00000435039 VNN2O95498 520 aa11.88□□□□□ -0.51
PCOTH-203ENST00000435039 ZBED1O96006 694 aa11.88□□□□□ -0.51
PCOTH-203ENST00000435039 SDC4P31431 198 aa11.88□□□□□ -0.51
PCOTH-203ENST00000435039 PCK1P35558 622 aa11.88□□□□□ -0.51
PCOTH-203ENST00000435039 FLT3P36888 993 aa11.88□□□□□ -0.51
PCOTH-203ENST00000435039 GRIK1P39086 918 aa11.88□□□□□ -0.51
PCOTH-203ENST00000435039 NDUFV1P49821 464 aa11.88□□□□□ -0.51
PCOTH-203ENST00000435039 PTPROQ16827 1216 aa11.88□□□□□ -0.51
PCOTH-203ENST00000435039 LRRC38Q5VT99 294 aa11.88□□□□□ -0.51
PCOTH-203ENST00000435039 PM20D1Q6GTS8 502 aa11.88□□□□□ -0.51
PCOTH-203ENST00000435039 RNF19BQ6ZMZ0 732 aa11.88□□□□□ -0.51
PCOTH-203ENST00000435039 BEND5Q7L4P6 421 aa11.88□□□□□ -0.51
PCOTH-203ENST00000435039 BHLHA9Q7RTU4 235 aa11.88□□□□□ -0.51
PCOTH-203ENST00000435039 POLNQ7Z5Q5 900 aa11.88□□□□□ -0.51
PCOTH-203ENST00000435039 SCUBE3Q8IX30 993 aa11.88□□□□□ -0.51
PCOTH-203ENST00000435039 RHOT1Q8IXI2 618 aa11.88□□□□□ -0.51
PCOTH-203ENST00000435039 EMC1Q8N766 993 aa11.88□□□□□ -0.51
PCOTH-203ENST00000435039 KLHL23Q8NBE8 558 aa11.88□□□□□ -0.51
PCOTH-203ENST00000435039 RXFP2Q8WXD0 754 aa11.88□□□□□ -0.51
PCOTH-203ENST00000435039 PBKQ96KB5 322 aa11.88□□□□□ -0.51
PCOTH-203ENST00000435039 SPATA17Q96L03 361 aa11.88□□□□□ -0.51
PCOTH-203ENST00000435039 PGLYRP2Q96PD5 576 aa11.88□□□□□ -0.51
PCOTH-203ENST00000435039 SLC2A13Q96QE2 648 aa11.88□□□□□ -0.51
PCOTH-203ENST00000435039 GAS2L1Q99501 681 aaPredicted RBP11.88□□□□□ -0.51
PCOTH-203ENST00000435039 CLSTN3Q9BQT9 956 aa11.88□□□□□ -0.51
PCOTH-203ENST00000435039 PRDM12Q9H4Q4 367 aa11.88□□□□□ -0.51
PCOTH-203ENST00000435039 POPDC2Q9HBU9 364 aa11.88□□□□□ -0.51
PCOTH-203ENST00000435039 RXFP1Q9HBX9 757 aa11.88□□□□□ -0.51
PCOTH-203ENST00000435039 PRDM6Q9NQX0 595 aa11.88□□□□□ -0.51
PCOTH-203ENST00000435039 COMMD8Q9NX08 183 aa11.88□□□□□ -0.51
PCOTH-203ENST00000435039 RNF14Q9UBS8 474 aa11.88□□□□□ -0.51
PCOTH-203ENST00000435039 SBDSQ9Y3A5 250 aaKnown RBP eCLIP11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms