RNA–Protein interactions for RNA: ENST00000425280.1

LDB1-202, Transcript of LIM domain binding 1, humanhuman

TSL 5 BASIC

Gene LDB1, Length 2,089 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-202ENST00000425280 HSD17B3P37058 310 aa27.74■■■□□ 2.03
LDB1-202ENST00000425280 BFSP2Q13515 415 aa27.74■■■□□ 2.03
LDB1-202ENST00000425280 UAP1Q16222 522 aaPredicted RBP27.74■■■□□ 2.03
LDB1-202ENST00000425280 RSPH1Q8WYR4 309 aa27.74■■■□□ 2.03
LDB1-202ENST00000425280 ART4Q93070 314 aa27.74■■■□□ 2.03
LDB1-202ENST00000425280 HAUS1Q96CS2 278 aa27.74■■■□□ 2.03
LDB1-202ENST00000425280 DEFB118Q96PH6 123 aa27.74■■■□□ 2.03
LDB1-202ENST00000425280 FTHL17Q9BXU8 183 aa27.74■■■□□ 2.03
LDB1-202ENST00000425280 TXLNGYQ9BZA5 131 aa27.74■■■□□ 2.03
LDB1-202ENST00000425280 STAU2Q9NUL3 570 aaKnown RBP eCLIP27.74■■■□□ 2.03
LDB1-202ENST00000425280 ASIC3Q9UHC3 531 aa27.74■■■□□ 2.03
LDB1-202ENST00000425280 F8W810 466 aa27.73■■■□□ 2.03
LDB1-202ENST00000425280 NBNO60934 754 aa27.73■■■□□ 2.03
LDB1-202ENST00000425280 ENDOD1O94919 500 aa27.73■■■□□ 2.03
LDB1-202ENST00000425280 IVDP26440 423 aa27.73■■■□□ 2.03
LDB1-202ENST00000425280 ARSEP51690 589 aa27.73■■■□□ 2.03
LDB1-202ENST00000425280 MAP3K7CLP57077 242 aa27.73■■■□□ 2.03
LDB1-202ENST00000425280 DHX9Q08211 1270 aaKnown RBP27.73■■■□□ 2.03
LDB1-202ENST00000425280 ADCY1Q08828 1119 aa27.73■■■□□ 2.03
LDB1-202ENST00000425280 BYSLQ13895 437 aaKnown RBP27.73■■■□□ 2.03
LDB1-202ENST00000425280 GPNMBQ14956 572 aa27.73■■■□□ 2.03
LDB1-202ENST00000425280 TRIP13Q15645 432 aaPredicted RBP27.73■■■□□ 2.03
LDB1-202ENST00000425280 BBS12Q6ZW61 710 aa27.73■■■□□ 2.03
LDB1-202ENST00000425280 METTL23Q86XA0 190 aa27.73■■■□□ 2.03
LDB1-202ENST00000425280 CST8O60676 142 aa27.72■■■□□ 2.03
LDB1-202ENST00000425280 DESP17661 470 aa27.72■■■□□ 2.03
LDB1-202ENST00000425280 HDAC4P56524 1084 aa27.72■■■□□ 2.03
LDB1-202ENST00000425280 EFHC1Q5JVL4 640 aa27.72■■■□□ 2.03
LDB1-202ENST00000425280 SCYL2Q6P3W7 929 aa27.72■■■□□ 2.03
LDB1-202ENST00000425280 ZNF280BQ86YH2 543 aa27.72■■■□□ 2.03
LDB1-202ENST00000425280 NDRG1Q92597 394 aaKnown RBP27.72■■■□□ 2.03
LDB1-202ENST00000425280 SMOQ99835 787 aa27.72■■■□□ 2.03
LDB1-202ENST00000425280 ADAM33Q9BZ11 813 aa27.72■■■□□ 2.03
LDB1-202ENST00000425280 WHRNQ9P202 907 aa27.72■■■□□ 2.03
LDB1-202ENST00000425280 DSEQ9UL01 958 aa27.72■■■□□ 2.03
LDB1-202ENST00000425280 PPFIA2O75334 1257 aa27.72■■■□□ 2.03
LDB1-202ENST00000425280 AP1G2O75843 785 aa27.72■■■□□ 2.03
LDB1-202ENST00000425280 DDHD2O94830 711 aa27.72■■■□□ 2.03
LDB1-202ENST00000425280 DYNLT1P63172 113 aa27.72■■■□□ 2.03
LDB1-202ENST00000425280 NOMO2Q5JPE7 1267 aa27.72■■■□□ 2.03
LDB1-202ENST00000425280 CENPIQ92674 756 aaPredicted RBP27.72■■■□□ 2.03
LDB1-202ENST00000425280 SUSD3Q96L08 255 aa27.72■■■□□ 2.03
LDB1-202ENST00000425280 SH3GL2Q99962 352 aa27.72■■■□□ 2.03
LDB1-202ENST00000425280 NCAPGQ9BPX3 1015 aa27.72■■■□□ 2.03
LDB1-202ENST00000425280 DDX23Q9BUQ8 820 aaKnown RBP27.72■■■□□ 2.03
LDB1-202ENST00000425280 CALN1Q9BXU9 219 aa27.72■■■□□ 2.03
LDB1-202ENST00000425280 FAN1Q9Y2M0 1017 aa27.72■■■□□ 2.03
LDB1-202ENST00000425280 CDH6P55285 790 aa27.71■■■□□ 2.03
LDB1-202ENST00000425280 LMNB2Q03252 620 aa27.71■■■□□ 2.03
LDB1-202ENST00000425280 DSC1Q08554 894 aa27.71■■■□□ 2.03
LDB1-202ENST00000425280 BOLA3Q53S33 107 aa27.71■■■□□ 2.03
LDB1-202ENST00000425280 RUFY1Q96T51 708 aa27.71■■■□□ 2.03
LDB1-202ENST00000425280 ACBD6Q9BR61 282 aa27.71■■■□□ 2.03
LDB1-202ENST00000425280 FAM129AQ9BZQ8 928 aa27.71■■■□□ 2.03
LDB1-202ENST00000425280 LRRC4Q9HBW1 653 aa27.71■■■□□ 2.03
LDB1-202ENST00000425280 TMEM30AQ9NV96 361 aa27.71■■■□□ 2.03
LDB1-202ENST00000425280 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP27.71■■■□□ 2.03
LDB1-202ENST00000425280 DRG1Q9Y295 367 aaKnown RBP27.71■■■□□ 2.03
LDB1-202ENST00000425280 TP73O15350 636 aa27.71■■■□□ 2.03
LDB1-202ENST00000425280 NDUFV1P49821 464 aa27.71■■■□□ 2.03
LDB1-202ENST00000425280 VCPP55072 806 aaKnown RBP27.71■■■□□ 2.03
LDB1-202ENST00000425280 MRPS5P82675 430 aaKnown RBP27.71■■■□□ 2.03
LDB1-202ENST00000425280 CALCOCO2Q13137 446 aa27.71■■■□□ 2.03
LDB1-202ENST00000425280 ZNF365Q70YC5 407 aa27.71■■■□□ 2.03
LDB1-202ENST00000425280 RFX6Q8HWS3 928 aa27.71■■■□□ 2.03
LDB1-202ENST00000425280 URGCPQ8TCY9 931 aa27.71■■■□□ 2.03
LDB1-202ENST00000425280 TEKT4Q8WW24 435 aa27.71■■■□□ 2.03
LDB1-202ENST00000425280 NKD2Q969F2 451 aaPredicted RBP27.71■■■□□ 2.03
LDB1-202ENST00000425280 SNF8Q96H20 258 aa27.71■■■□□ 2.03
LDB1-202ENST00000425280 RNF40O75150 1001 aa27.7■■■□□ 2.02
LDB1-202ENST00000425280 RABGGTBP53611 331 aa27.7■■■□□ 2.02
LDB1-202ENST00000425280 CACNA2D1P54289 1103 aa27.7■■■□□ 2.02
LDB1-202ENST00000425280 MMRN1Q13201 1228 aa27.7■■■□□ 2.02
LDB1-202ENST00000425280 MTMR3Q13615 1198 aa27.7■■■□□ 2.02
LDB1-202ENST00000425280 DPYSL3Q14195 570 aa27.7■■■□□ 2.02
LDB1-202ENST00000425280 OASLQ15646 514 aaKnown RBP27.7■■■□□ 2.02
LDB1-202ENST00000425280 ZMIZ2Q8NF64 920 aa27.7■■■□□ 2.02
LDB1-202ENST00000425280 SLC35B2Q8TB61 432 aa27.7■■■□□ 2.02
LDB1-202ENST00000425280 TBCBQ99426 244 aa27.7■■■□□ 2.02
LDB1-202ENST00000425280 GPATCH2LQ9NWQ4 482 aa27.7■■■□□ 2.02
LDB1-202ENST00000425280 SAE1Q9UBE0 346 aaPredicted RBP27.7■■■□□ 2.02
LDB1-202ENST00000425280 MTRF1LQ9UGC7 380 aaKnown RBP27.7■■■□□ 2.02
LDB1-202ENST00000425280 OGDHLQ9ULD0 1010 aa27.7■■■□□ 2.02
LDB1-202ENST00000425280 ZNF148Q9UQR1 794 aa27.7■■■□□ 2.02
LDB1-202ENST00000425280 PLAAQ9Y263 795 aa27.7■■■□□ 2.02
LDB1-202ENST00000425280 ITIH2P19823 946 aa27.69■■■□□ 2.02
LDB1-202ENST00000425280 KLRC2P26717 231 aa27.69■■■□□ 2.02
LDB1-202ENST00000425280 PLEKHG4Q58EX7 1191 aa27.69■■■□□ 2.02
LDB1-202ENST00000425280 INTS6LQ5JSJ4 861 aaKnown RBP27.69■■■□□ 2.02
LDB1-202ENST00000425280 FAM171BQ6P995 826 aa27.69■■■□□ 2.02
LDB1-202ENST00000425280 GSTA5Q7RTV2 222 aa27.69■■■□□ 2.02
LDB1-202ENST00000425280 SIX6OS1Q8N1H7 587 aa27.69■■■□□ 2.02
LDB1-202ENST00000425280 DBF4BQ8NFT6 615 aa27.69■■■□□ 2.02
LDB1-202ENST00000425280 MYLPFQ96A32 169 aa27.69■■■□□ 2.02
LDB1-202ENST00000425280 KCNK16Q96T55 309 aa27.69■■■□□ 2.02
LDB1-202ENST00000425280 SNRNP25Q9BV90 132 aaKnown RBP27.69■■■□□ 2.02
LDB1-202ENST00000425280 ATP8A1Q9Y2Q0 1164 aa27.69■■■□□ 2.02
LDB1-202ENST00000425280 OPA1O60313 960 aa27.69■■■□□ 2.02
LDB1-202ENST00000425280 KRT14P02533 472 aa27.69■■■□□ 2.02
LDB1-202ENST00000425280 CCL5P13501 91 aa27.69■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms