RNA–Protein interactions for RNA: ENST00000422080.5

HDLBP-208, Transcript of high density lipoprotein binding protein, humanhuman

TSL 3

Gene HDLBP, Length 578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-208ENST00000422080 CCDC26Q8TAB7 109 aa18.82■□□□□ 0.6
HDLBP-208ENST00000422080 SPATA20Q8TB22 786 aa18.82■□□□□ 0.6
HDLBP-208ENST00000422080 HNRNPABQ99729 332 aaKnown RBP18.82■□□□□ 0.6
HDLBP-208ENST00000422080 NT5C1AQ9BXI3 368 aa18.82■□□□□ 0.6
HDLBP-208ENST00000422080 DNAI2Q9GZS0 605 aa18.82■□□□□ 0.6
HDLBP-208ENST00000422080 NIF3L1Q9GZT8 377 aa18.82■□□□□ 0.6
HDLBP-208ENST00000422080 FBXO44Q9H4M3 255 aa18.82■□□□□ 0.6
HDLBP-208ENST00000422080 HOOK1Q9UJC3 728 aaKnown RBP18.82■□□□□ 0.6
HDLBP-208ENST00000422080 CCDC163A0A0D9SF12 145 aa18.81■□□□□ 0.6
HDLBP-208ENST00000422080 RNF40O75150 1001 aa18.81■□□□□ 0.6
HDLBP-208ENST00000422080 FAM200BP0CF97 657 aa18.81■□□□□ 0.6
HDLBP-208ENST00000422080 MBL2P11226 248 aaPredicted RBP18.81■□□□□ 0.6
HDLBP-208ENST00000422080 SIM2Q14190 667 aaPredicted RBP18.81■□□□□ 0.6
HDLBP-208ENST00000422080 LAIR1Q6GTX8 287 aa18.81■□□□□ 0.6
HDLBP-208ENST00000422080 PKN3Q6P5Z2 889 aa18.81■□□□□ 0.6
HDLBP-208ENST00000422080 FILIP1Q7Z7B0 1213 aa18.81■□□□□ 0.6
HDLBP-208ENST00000422080 TWNKQ96RR1 684 aa18.81■□□□□ 0.6
HDLBP-208ENST00000422080 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.81■□□□□ 0.6
HDLBP-208ENST00000422080 SMPD4Q9NXE4 827 aa18.81■□□□□ 0.6
HDLBP-208ENST00000422080 CFAP97Q9P2B7 532 aa18.81■□□□□ 0.6
HDLBP-208ENST00000422080 GMEB2Q9UKD1 530 aa18.81■□□□□ 0.6
HDLBP-208ENST00000422080 SLC8A2Q9UPR5 921 aa18.81■□□□□ 0.6
HDLBP-208ENST00000422080 FRYLO94915 3013 aa18.81■□□□□ 0.6
HDLBP-208ENST00000422080 DENND4CQ5VZ89 1909 aa18.8■□□□□ 0.6
HDLBP-208ENST00000422080 KIF26AQ9ULI4 1882 aaPredicted RBP18.8■□□□□ 0.6
HDLBP-208ENST00000422080 COCHO43405 550 aa18.8■□□□□ 0.6
HDLBP-208ENST00000422080 CILPO75339 1184 aa18.8■□□□□ 0.6
HDLBP-208ENST00000422080 BEST1O76090 585 aa18.8■□□□□ 0.6
HDLBP-208ENST00000422080 MAP3K7CLP57077 242 aa18.8■□□□□ 0.6
HDLBP-208ENST00000422080 FOXK2Q01167 660 aa18.8■□□□□ 0.6
HDLBP-208ENST00000422080 NAIF1Q69YI7 327 aaPredicted RBP18.8■□□□□ 0.6
HDLBP-208ENST00000422080 HEATR6Q6AI08 1181 aaKnown RBP18.8■□□□□ 0.6
HDLBP-208ENST00000422080 ZC3H3Q8IXZ2 948 aaKnown RBP18.8■□□□□ 0.6
HDLBP-208ENST00000422080 ELOA2Q8IYF1 753 aaPredicted RBP18.8■□□□□ 0.6
HDLBP-208ENST00000422080 TTC39CQ8N584 583 aa18.8■□□□□ 0.6
HDLBP-208ENST00000422080 CAMKK1Q8N5S9 505 aa18.8■□□□□ 0.6
HDLBP-208ENST00000422080 WHAMMQ8TF30 809 aa18.8■□□□□ 0.6
HDLBP-208ENST00000422080 SMARCE1Q969G3 411 aa18.8■□□□□ 0.6
HDLBP-208ENST00000422080 CYFIP2Q96F07 1278 aa18.8■□□□□ 0.6
HDLBP-208ENST00000422080 TSG101Q99816 390 aa18.8■□□□□ 0.6
HDLBP-208ENST00000422080 MMRN2Q9H8L6 949 aa18.8■□□□□ 0.6
HDLBP-208ENST00000422080 FAM49BQ9NUQ9 324 aa18.8■□□□□ 0.6
HDLBP-208ENST00000422080 GMIPQ9P107 970 aa18.8■□□□□ 0.6
HDLBP-208ENST00000422080 TBC1D14Q9P2M4 693 aa18.8■□□□□ 0.6
HDLBP-208ENST00000422080 PCDHA5Q9Y5H7 936 aa18.8■□□□□ 0.6
HDLBP-208ENST00000422080 E2F8A0AVK6 867 aa18.79■□□□□ 0.6
HDLBP-208ENST00000422080 MXI1P50539 228 aa18.79■□□□□ 0.6
HDLBP-208ENST00000422080 FKBP3Q00688 224 aaKnown RBP18.79■□□□□ 0.6
HDLBP-208ENST00000422080 DHCR24Q15392 516 aa18.79■□□□□ 0.6
HDLBP-208ENST00000422080 PRR23BQ6ZRT6 265 aa18.79■□□□□ 0.6
HDLBP-208ENST00000422080 FBXL13Q8NEE6 735 aa18.79■□□□□ 0.6
HDLBP-208ENST00000422080 EZH1Q92800 747 aaPredicted RBP18.79■□□□□ 0.6
HDLBP-208ENST00000422080 SEMA4DQ92854 862 aa18.79■□□□□ 0.6
HDLBP-208ENST00000422080 OTUB2Q96DC9 234 aa18.79■□□□□ 0.6
HDLBP-208ENST00000422080 EEF2KMTQ96G04 330 aa18.79■□□□□ 0.6
HDLBP-208ENST00000422080 DUSP9Q99956 384 aaKnown RBP18.79■□□□□ 0.6
HDLBP-208ENST00000422080 FAM124BQ9H5Z6 455 aaPredicted RBP18.79■□□□□ 0.6
HDLBP-208ENST00000422080 PNPLA8Q9NP80 782 aa18.79■□□□□ 0.6
HDLBP-208ENST00000422080 RAB20Q9NX57 234 aa18.79■□□□□ 0.6
HDLBP-208ENST00000422080 SLC16A3O15427 465 aaKnown RBP18.78■□□□□ 0.6
HDLBP-208ENST00000422080 CYP17A1P05093 508 aa18.78■□□□□ 0.6
HDLBP-208ENST00000422080 RETP07949 1114 aa18.78■□□□□ 0.6
HDLBP-208ENST00000422080 CD58P19256 250 aa18.78■□□□□ 0.6
HDLBP-208ENST00000422080 TGM1P22735 817 aa18.78■□□□□ 0.6
HDLBP-208ENST00000422080 ADORA2BP29275 332 aa18.78■□□□□ 0.6
HDLBP-208ENST00000422080 OPRD1P41143 372 aa18.78■□□□□ 0.6
HDLBP-208ENST00000422080 GAB4Q2WGN9 574 aa18.78■□□□□ 0.6
HDLBP-208ENST00000422080 ANKRD40Q6AI12 368 aa18.78■□□□□ 0.6
HDLBP-208ENST00000422080 CLEC20AQ6ZU45 233 aa18.78■□□□□ 0.6
HDLBP-208ENST00000422080 SYT13Q7L8C5 426 aa18.78■□□□□ 0.6
HDLBP-208ENST00000422080 ERMP1Q7Z2K6 904 aa18.78■□□□□ 0.6
HDLBP-208ENST00000422080 RMDN1Q96DB5 314 aa18.78■□□□□ 0.6
HDLBP-208ENST00000422080 ZFRQ96KR1 1074 aaKnown RBP18.78■□□□□ 0.6
HDLBP-208ENST00000422080 CCSER2Q9H7U1 834 aa18.78■□□□□ 0.6
HDLBP-208ENST00000422080 TLR8Q9NR97 1041 aaKnown RBP18.78■□□□□ 0.6
HDLBP-208ENST00000422080 SCML2Q9UQR0 700 aa18.78■□□□□ 0.6
HDLBP-208ENST00000422080 OBSL1O75147 1896 aa18.77■□□□□ 0.6
HDLBP-208ENST00000422080 PTPRDP23468 1912 aa18.77■□□□□ 0.6
HDLBP-208ENST00000422080 HHLA1C9JL84 531 aa18.77■□□□□ 0.6
HDLBP-208ENST00000422080 LRP3O75074 770 aa18.77■□□□□ 0.6
HDLBP-208ENST00000422080 HOXC13P31276 330 aa18.77■□□□□ 0.6
HDLBP-208ENST00000422080 EIF2DP41214 584 aaKnown RBP18.77■□□□□ 0.6
HDLBP-208ENST00000422080 LRRC63Q05C16 580 aa18.77■□□□□ 0.6
HDLBP-208ENST00000422080 SRSF5Q13243 272 aaKnown RBP18.77■□□□□ 0.6
HDLBP-208ENST00000422080 LPAL2Q16609 132 aa18.77■□□□□ 0.6
HDLBP-208ENST00000422080 RHBDF2Q6PJF5 856 aa18.77■□□□□ 0.6
HDLBP-208ENST00000422080 RPLP0P6Q8NHW5 317 aa18.77■□□□□ 0.6
HDLBP-208ENST00000422080 ACDQ96AP0 544 aa18.77■□□□□ 0.6
HDLBP-208ENST00000422080 SH3BP1Q9Y3L3 701 aa18.77■□□□□ 0.6
HDLBP-208ENST00000422080 GREB1Q4ZG55 1949 aa18.76■□□□□ 0.59
HDLBP-208ENST00000422080 SPTBN4Q9H254 2564 aa18.76■□□□□ 0.59
HDLBP-208ENST00000422080 K7EQS6 105 aa18.76■□□□□ 0.59
HDLBP-208ENST00000422080 TLR5O60602 858 aa18.76■□□□□ 0.59
HDLBP-208ENST00000422080 ADH1CP00326 375 aa18.76■□□□□ 0.59
HDLBP-208ENST00000422080 SDHBP21912 280 aa18.76■□□□□ 0.59
HDLBP-208ENST00000422080 PGFP49763 221 aa18.76■□□□□ 0.59
HDLBP-208ENST00000422080 PUM1Q14671 1186 aaKnown RBP eCLIP18.76■□□□□ 0.596e-11■■■■□ 24.2
HDLBP-208ENST00000422080 CEP68Q76N32 757 aa18.76■□□□□ 0.59
HDLBP-208ENST00000422080 GAB3Q8WWW8 586 aa18.76■□□□□ 0.59
HDLBP-208ENST00000422080 DUSP16Q9BY84 665 aa18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms