RNA–Protein interactions for RNA: ENST00000417664.6

SSBP3-205, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 5 BASIC

Gene SSBP3, Length 1,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-205ENST00000417664 C15orf59Q2T9L4 293 aaPredicted RBP17.57■□□□□ 0.4
SSBP3-205ENST00000417664 NOMO2Q5JPE7 1267 aa17.57■□□□□ 0.4
SSBP3-205ENST00000417664 KCNT1Q5JUK3 1230 aa17.57■□□□□ 0.4
SSBP3-205ENST00000417664 KIAA0319Q5VV43 1072 aa17.57■□□□□ 0.4
SSBP3-205ENST00000417664 ZDHHC24Q6UX98 284 aa17.57■□□□□ 0.4
SSBP3-205ENST00000417664 CLEC20AQ6ZU45 233 aa17.57■□□□□ 0.4
SSBP3-205ENST00000417664 STRADAQ7RTN6 431 aa17.57■□□□□ 0.4
SSBP3-205ENST00000417664 FBXO25Q8TCJ0 367 aa17.57■□□□□ 0.4
SSBP3-205ENST00000417664 SH3TC2Q8TF17 1288 aa17.57■□□□□ 0.4
SSBP3-205ENST00000417664 FAM172AQ8WUF8 416 aa17.57■□□□□ 0.4
SSBP3-205ENST00000417664 RSPH1Q8WYR4 309 aa17.57■□□□□ 0.4
SSBP3-205ENST00000417664 SNF8Q96H20 258 aa17.57■□□□□ 0.4
SSBP3-205ENST00000417664 PAAF1Q9BRP4 392 aa17.57■□□□□ 0.4
SSBP3-205ENST00000417664 BEGAINQ9BUH8 593 aa17.57■□□□□ 0.4
SSBP3-205ENST00000417664 TMEM161AQ9NX61 479 aa17.57■□□□□ 0.4
SSBP3-205ENST00000417664 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP17.57■□□□□ 0.4
SSBP3-205ENST00000417664 CACNG4Q9UBN1 327 aa17.57■□□□□ 0.4
SSBP3-205ENST00000417664 ASIC3Q9UHC3 531 aa17.57■□□□□ 0.4
SSBP3-205ENST00000417664 GOLGA8KD6RF30 607 aa17.56■□□□□ 0.4
SSBP3-205ENST00000417664 ITGAVP06756 1048 aa17.56■□□□□ 0.4
SSBP3-205ENST00000417664 VCPP55072 806 aaKnown RBP17.56■□□□□ 0.4
SSBP3-205ENST00000417664 MRPS5P82675 430 aaKnown RBP17.56■□□□□ 0.4
SSBP3-205ENST00000417664 DHX9Q08211 1270 aaKnown RBP17.56■□□□□ 0.4
SSBP3-205ENST00000417664 ADCY2Q08462 1091 aa17.56■□□□□ 0.4
SSBP3-205ENST00000417664 DSC1Q08554 894 aa17.56■□□□□ 0.4
SSBP3-205ENST00000417664 SLMAPQ14BN4 828 aa17.56■□□□□ 0.4
SSBP3-205ENST00000417664 TAF5Q15542 800 aa17.56■□□□□ 0.4
SSBP3-205ENST00000417664 CYP4V2Q6ZWL3 525 aaPredicted RBP17.56■□□□□ 0.4
SSBP3-205ENST00000417664 FAM35AQ86V20 835 aa17.56■□□□□ 0.4
SSBP3-205ENST00000417664 THEM5Q8N1Q8 247 aa17.56■□□□□ 0.4
SSBP3-205ENST00000417664 APBB2Q92870 758 aa17.56■□□□□ 0.4
SSBP3-205ENST00000417664 SMARCD1Q96GM5 515 aa17.56■□□□□ 0.4
SSBP3-205ENST00000417664 PCED1BQ96HM7 432 aa17.56■□□□□ 0.4
SSBP3-205ENST00000417664 ZIM3Q96PE6 472 aa17.56■□□□□ 0.4
SSBP3-205ENST00000417664 TXLNGYQ9BZA5 131 aa17.56■□□□□ 0.4
SSBP3-205ENST00000417664 UNC93B1Q9H1C4 597 aa17.56■□□□□ 0.4
SSBP3-205ENST00000417664 NGRNQ9NPE2 291 aaKnown RBP17.56■□□□□ 0.4
SSBP3-205ENST00000417664 OGDHLQ9ULD0 1010 aa17.56■□□□□ 0.4
SSBP3-205ENST00000417664 DNAH12Q6ZR08 3092 aa17.55■□□□□ 0.4
SSBP3-205ENST00000417664 CST8O60676 142 aa17.55■□□□□ 0.4
SSBP3-205ENST00000417664 PARNO95453 639 aaKnown RBP17.55■□□□□ 0.4
SSBP3-205ENST00000417664 ATF2P15336 505 aa17.55■□□□□ 0.4
SSBP3-205ENST00000417664 IGFBP6P24592 240 aaPredicted RBP17.55■□□□□ 0.4
SSBP3-205ENST00000417664 HSD17B3P37058 310 aa17.55■□□□□ 0.4
SSBP3-205ENST00000417664 MATKP42679 507 aa17.55■□□□□ 0.4
SSBP3-205ENST00000417664 ARSEP51690 589 aa17.55■□□□□ 0.4
SSBP3-205ENST00000417664 ATP11AP98196 1134 aa17.55■□□□□ 0.4
SSBP3-205ENST00000417664 OASLQ15646 514 aaKnown RBP17.55■□□□□ 0.4
SSBP3-205ENST00000417664 CDO1Q16878 200 aa17.55■□□□□ 0.4
SSBP3-205ENST00000417664 FAM171BQ6P995 826 aa17.55■□□□□ 0.4
SSBP3-205ENST00000417664 CD300LGQ6UXG3 332 aa17.55■□□□□ 0.4
SSBP3-205ENST00000417664 SIX6OS1Q8N1H7 587 aa17.55■□□□□ 0.4
SSBP3-205ENST00000417664 SLC35B2Q8TB61 432 aa17.55■□□□□ 0.4
SSBP3-205ENST00000417664 LINC01599Q8WXQ3 324 aa17.55■□□□□ 0.4
SSBP3-205ENST00000417664 HSPH1Q92598 858 aa17.55■□□□□ 0.4
SSBP3-205ENST00000417664 ACSF2Q96CM8 615 aaPredicted RBP17.55■□□□□ 0.4
SSBP3-205ENST00000417664 PEBP4Q96S96 227 aa17.55■□□□□ 0.4
SSBP3-205ENST00000417664 MAK16Q9BXY0 300 aaKnown RBP17.55■□□□□ 0.4
SSBP3-205ENST00000417664 CNGB3Q9NQW8 809 aa17.55■□□□□ 0.4
SSBP3-205ENST00000417664 KRT82Q9NSB4 513 aa17.55■□□□□ 0.4
SSBP3-205ENST00000417664 STAU2Q9NUL3 570 aaKnown RBP eCLIP17.55■□□□□ 0.4
SSBP3-205ENST00000417664 DNPEPQ9ULA0 475 aa17.55■□□□□ 0.4
SSBP3-205ENST00000417664 ZNF148Q9UQR1 794 aa17.55■□□□□ 0.4
SSBP3-205ENST00000417664 MYBPHLA2RUH7 354 aa17.55■□□□□ 0.4
SSBP3-205ENST00000417664 APOC4-APOC2K7ER74 178 aa17.55■□□□□ 0.4
SSBP3-205ENST00000417664 CLDN5O00501 218 aa17.55■□□□□ 0.4
SSBP3-205ENST00000417664 DAB1O75553 588 aa17.55■□□□□ 0.4
SSBP3-205ENST00000417664 AP1G2O75843 785 aa17.55■□□□□ 0.4
SSBP3-205ENST00000417664 APOC2P02655 101 aa17.55■□□□□ 0.4
SSBP3-205ENST00000417664 IVDP26440 423 aa17.55■□□□□ 0.4
SSBP3-205ENST00000417664 CDH6P55285 790 aa17.55■□□□□ 0.4
SSBP3-205ENST00000417664 YWHAZP63104 245 aaKnown RBP17.55■□□□□ 0.4
SSBP3-205ENST00000417664 ADIGQ0VDE8 80 aa17.55■□□□□ 0.4
SSBP3-205ENST00000417664 PLEKHG4Q58EX7 1191 aa17.55■□□□□ 0.4
SSBP3-205ENST00000417664 INTS6LQ5JSJ4 861 aaKnown RBP17.55■□□□□ 0.4
SSBP3-205ENST00000417664 SH3PXD2AQ5TCZ1 1133 aa17.55■□□□□ 0.4
SSBP3-205ENST00000417664 CEP128Q6ZU80 1094 aa17.55■□□□□ 0.4
SSBP3-205ENST00000417664 GSTA5Q7RTV2 222 aa17.55■□□□□ 0.4
SSBP3-205ENST00000417664 PSTKQ8IV42 348 aaKnown RBP17.55■□□□□ 0.4
SSBP3-205ENST00000417664 ALLCQ8N6M5 410 aa17.55■□□□□ 0.4
SSBP3-205ENST00000417664 PIK3R5Q8WYR1 880 aa17.55■□□□□ 0.4
SSBP3-205ENST00000417664 FOXP3Q9BZS1 431 aa17.55■□□□□ 0.4
SSBP3-205ENST00000417664 CSNK1G1Q9HCP0 422 aa17.55■□□□□ 0.4
SSBP3-205ENST00000417664 PNPLA8Q9NP80 782 aa17.55■□□□□ 0.4
SSBP3-205ENST00000417664 PCDHB8Q9UN66 801 aa17.55■□□□□ 0.4
SSBP3-205ENST00000417664 TIMM13Q9Y5L4 95 aaPredicted RBP17.55■□□□□ 0.4
SSBP3-205ENST00000417664 RNF40O75150 1001 aa17.54■□□□□ 0.4
SSBP3-205ENST00000417664 KLRC2P26717 231 aa17.54■□□□□ 0.4
SSBP3-205ENST00000417664 NOS2P35228 1153 aa17.54■□□□□ 0.4
SSBP3-205ENST00000417664 ADCY8P40145 1251 aa17.54■□□□□ 0.4
SSBP3-205ENST00000417664 EIF3BP55884 814 aaKnown RBP17.54■□□□□ 0.4
SSBP3-205ENST00000417664 HDAC4P56524 1084 aa17.54■□□□□ 0.4
SSBP3-205ENST00000417664 MAP3K7CLP57077 242 aa17.54■□□□□ 0.4
SSBP3-205ENST00000417664 ADCY1Q08828 1119 aa17.54■□□□□ 0.4
SSBP3-205ENST00000417664 SLC25A52Q3SY17 297 aa17.54■□□□□ 0.4
SSBP3-205ENST00000417664 RAB41Q5JT25 222 aa17.54■□□□□ 0.4
SSBP3-205ENST00000417664 CLLU1OSQ5K130 101 aa17.54■□□□□ 0.4
SSBP3-205ENST00000417664 ERMARDQ5T6L9 678 aa17.54■□□□□ 0.4
SSBP3-205ENST00000417664 OVOS1Q6IE37 1185 aa17.54■□□□□ 0.4
SSBP3-205ENST00000417664 RFX6Q8HWS3 928 aa17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms