RNA–Protein interactions for RNA: ENST00000414711.5

CPNE1-208, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 673 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-208ENST00000414711 KCNH2Q12809 1159 aa16.89■□□□□ 0.29
CPNE1-208ENST00000414711 PKDCCQ504Y2 493 aa16.89■□□□□ 0.29
CPNE1-208ENST00000414711 DCAF12L1Q5VU92 463 aa16.89■□□□□ 0.29
CPNE1-208ENST00000414711 BTBD8Q5XKL5 378 aa16.89■□□□□ 0.29
CPNE1-208ENST00000414711 SDE2Q6IQ49 451 aa16.89■□□□□ 0.29
CPNE1-208ENST00000414711 NUDT18Q6ZVK8 323 aa16.89■□□□□ 0.29
CPNE1-208ENST00000414711 NAT16Q8N8M0 369 aa16.89■□□□□ 0.29
CPNE1-208ENST00000414711 TMEM161BQ8NDZ6 487 aa16.89■□□□□ 0.29
CPNE1-208ENST00000414711 CADM4Q8NFZ8 388 aa16.89■□□□□ 0.29
CPNE1-208ENST00000414711 BICD1Q96G01 975 aa16.89■□□□□ 0.29
CPNE1-208ENST00000414711 GABRG3Q99928 467 aa16.89■□□□□ 0.29
CPNE1-208ENST00000414711 RUSC1Q9BVN2 902 aa16.89■□□□□ 0.29
CPNE1-208ENST00000414711 GPR174Q9BXC1 333 aa16.89■□□□□ 0.29
CPNE1-208ENST00000414711 DEC1Q9P2X7 70 aa16.89■□□□□ 0.29
CPNE1-208ENST00000414711 KIAA1024Q9UPX6 916 aa16.89■□□□□ 0.29
CPNE1-208ENST00000414711 RAD54BQ9Y620 910 aa16.89■□□□□ 0.29
CPNE1-208ENST00000414711 UBR5O95071 2799 aaPredicted RBP16.89■□□□□ 0.29
CPNE1-208ENST00000414711 TCHHQ07283 1943 aa16.89■□□□□ 0.29
CPNE1-208ENST00000414711 BRINP1O60477 761 aa16.88■□□□□ 0.29
CPNE1-208ENST00000414711 DTNBO60941 627 aa16.88■□□□□ 0.29
CPNE1-208ENST00000414711 TARDBPQ13148 414 aaKnown RBP eCLIP16.88■□□□□ 0.29
CPNE1-208ENST00000414711 PDIA5Q14554 519 aa16.88■□□□□ 0.29
CPNE1-208ENST00000414711 SF3A1Q15459 793 aaKnown RBP16.88■□□□□ 0.29
CPNE1-208ENST00000414711 INAVAQ3KP66 663 aa16.88■□□□□ 0.29
CPNE1-208ENST00000414711 COLEC12Q5KU26 742 aa16.88■□□□□ 0.29
CPNE1-208ENST00000414711 PRICKLE2Q7Z3G6 844 aa16.88■□□□□ 0.29
CPNE1-208ENST00000414711 SCN4BQ8IWT1 228 aa16.88■□□□□ 0.29
CPNE1-208ENST00000414711 CD302Q8IX05 232 aa16.88■□□□□ 0.29
CPNE1-208ENST00000414711 DDX19AQ9NUU7 478 aaKnown RBP16.88■□□□□ 0.29
CPNE1-208ENST00000414711 WSB2Q9NYS7 404 aaPredicted RBP16.88■□□□□ 0.29
CPNE1-208ENST00000414711 STARD13Q9Y3M8 1113 aa16.88■□□□□ 0.29
CPNE1-208ENST00000414711 PCDHGA1Q9Y5H4 931 aa16.88■□□□□ 0.29
CPNE1-208ENST00000414711 KNL1Q8NG31 2342 aa16.88■□□□□ 0.29
CPNE1-208ENST00000414711 SFI1A8K8P3 1242 aa16.87■□□□□ 0.29
CPNE1-208ENST00000414711 HOXC11O43248 304 aaPredicted RBP16.87■□□□□ 0.29
CPNE1-208ENST00000414711 PCDHGA12O60330 932 aa16.87■□□□□ 0.29
CPNE1-208ENST00000414711 OLFM2O95897 454 aa16.87■□□□□ 0.29
CPNE1-208ENST00000414711 ACTN2P35609 894 aa16.87■□□□□ 0.29
CPNE1-208ENST00000414711 CCT8P50990 548 aa16.87■□□□□ 0.29
CPNE1-208ENST00000414711 TMPRSS3P57727 454 aa16.87■□□□□ 0.29
CPNE1-208ENST00000414711 CCDC142Q17RM4 750 aa16.87■□□□□ 0.29
CPNE1-208ENST00000414711 KIF19Q2TAC6 998 aa16.87■□□□□ 0.29
CPNE1-208ENST00000414711 CFAP221Q4G0U5 840 aa16.87■□□□□ 0.29
CPNE1-208ENST00000414711 INTS6LQ5JSJ4 861 aaKnown RBP16.87■□□□□ 0.29
CPNE1-208ENST00000414711 RUFY3Q7L099 469 aa16.87■□□□□ 0.29
CPNE1-208ENST00000414711 ERICH1Q86X53 443 aa16.87■□□□□ 0.29
CPNE1-208ENST00000414711 SPIRE2Q8WWL2 714 aa16.87■□□□□ 0.29
CPNE1-208ENST00000414711 LGMNQ99538 433 aa16.87■□□□□ 0.29
CPNE1-208ENST00000414711 PKMYT1Q99640 499 aa16.87■□□□□ 0.29
CPNE1-208ENST00000414711 NTPCRQ9BSD7 190 aaKnown RBP16.87■□□□□ 0.29
CPNE1-208ENST00000414711 RNF38Q9H0F5 515 aa16.87■□□□□ 0.29
CPNE1-208ENST00000414711 TRPM5Q9NZQ8 1165 aa16.87■□□□□ 0.29
CPNE1-208ENST00000414711 USP36Q9P275 1121 aaKnown RBP16.87■□□□□ 0.29
CPNE1-208ENST00000414711 TBC1D14Q9P2M4 693 aa16.87■□□□□ 0.29
CPNE1-208ENST00000414711 EIF2B4Q9UI10 523 aaKnown RBP16.87■□□□□ 0.29
CPNE1-208ENST00000414711 DERAQ9Y315 318 aa16.87■□□□□ 0.29
CPNE1-208ENST00000414711 SNX11Q9Y5W9 270 aa16.87■□□□□ 0.29
CPNE1-208ENST00000414711 DOPEY2Q9Y3R5 2298 aa16.86■□□□□ 0.29
CPNE1-208ENST00000414711 KPNA7A9QM74 516 aa16.86■□□□□ 0.29
CPNE1-208ENST00000414711 OGTO15294 1046 aa16.86■□□□□ 0.29
CPNE1-208ENST00000414711 OR52Z1P0C646 297 aa16.86■□□□□ 0.29
CPNE1-208ENST00000414711 ACAT1P24752 427 aaKnown RBP16.86■□□□□ 0.29
CPNE1-208ENST00000414711 CSNK1EP49674 416 aaKnown RBP16.86■□□□□ 0.29
CPNE1-208ENST00000414711 AFF3P51826 1226 aaKnown RBP16.86■□□□□ 0.29
CPNE1-208ENST00000414711 SV2CQ496J9 727 aa16.86■□□□□ 0.29
CPNE1-208ENST00000414711 HES3Q5TGS1 186 aa16.86■□□□□ 0.29
CPNE1-208ENST00000414711 DDX42Q86XP3 938 aaKnown RBP eCLIP16.86■□□□□ 0.29
CPNE1-208ENST00000414711 SPATA2LQ8IUW3 424 aaPredicted RBP16.86■□□□□ 0.29
CPNE1-208ENST00000414711 C1orf216Q8TAB5 229 aa16.86■□□□□ 0.29
CPNE1-208ENST00000414711 ACBD6Q9BR61 282 aa16.86■□□□□ 0.29
CPNE1-208ENST00000414711 DDX43Q9NXZ2 648 aaKnown RBP16.86■□□□□ 0.29
CPNE1-208ENST00000414711 NXF1Q9UBU9 619 aaKnown RBP16.86■□□□□ 0.29
CPNE1-208ENST00000414711 PCDHB6Q9Y5E3 794 aa16.86■□□□□ 0.29
CPNE1-208ENST00000414711 METTL12A8MUP2 240 aa16.85■□□□□ 0.29
CPNE1-208ENST00000414711 TRIM24O15164 1050 aa16.85■□□□□ 0.29
CPNE1-208ENST00000414711 RFPL3O75679 317 aa16.85■□□□□ 0.29
CPNE1-208ENST00000414711 LIG4P49917 911 aa16.85■□□□□ 0.29
CPNE1-208ENST00000414711 SMTNP53814 917 aa16.85■□□□□ 0.29
CPNE1-208ENST00000414711 UCNP55089 124 aa16.85■□□□□ 0.29
CPNE1-208ENST00000414711 TBC1D25Q3MII6 688 aa16.85■□□□□ 0.29
CPNE1-208ENST00000414711 ARHGAP40Q5TG30 622 aa16.85■□□□□ 0.29
CPNE1-208ENST00000414711 USP49Q70CQ1 688 aa16.85■□□□□ 0.29
CPNE1-208ENST00000414711 PDCL2Q8N4E4 241 aa16.85■□□□□ 0.29
CPNE1-208ENST00000414711 WASF1Q92558 559 aa16.85■□□□□ 0.29
CPNE1-208ENST00000414711 TTC9Q92623 222 aa16.85■□□□□ 0.29
CPNE1-208ENST00000414711 MED8Q96G25 268 aa16.85■□□□□ 0.29
CPNE1-208ENST00000414711 FUBP3Q96I24 572 aaKnown RBP eCLIP16.85■□□□□ 0.29
CPNE1-208ENST00000414711 TRIM4Q9C037 500 aa16.85■□□□□ 0.29
CPNE1-208ENST00000414711 CPNE5Q9HCH3 593 aa16.85■□□□□ 0.29
CPNE1-208ENST00000414711 ORC3Q9UBD5 711 aaPredicted RBP16.85■□□□□ 0.29
CPNE1-208ENST00000414711 IL17BQ9UHF5 180 aa16.85■□□□□ 0.29
CPNE1-208ENST00000414711 GTF3C4Q9UKN8 822 aa16.85■□□□□ 0.29
CPNE1-208ENST00000414711 E2F8A0AVK6 867 aa16.84■□□□□ 0.29
CPNE1-208ENST00000414711 ZNF840PA6NDX5 716 aa16.84■□□□□ 0.29
CPNE1-208ENST00000414711 E9PMD0 336 aa16.84■□□□□ 0.29
CPNE1-208ENST00000414711 HNRNPDLO14979 420 aaKnown RBP16.84■□□□□ 0.29
CPNE1-208ENST00000414711 CDC45O75419 566 aa16.84■□□□□ 0.29
CPNE1-208ENST00000414711 OAS1P00973 400 aaKnown RBP16.84■□□□□ 0.29
CPNE1-208ENST00000414711 CDK4P11802 303 aa16.84■□□□□ 0.29
CPNE1-208ENST00000414711 PLS3P13797 630 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms