RNA–Protein interactions for RNA: ENST00000402340.2

FAM47DP-201, Transcript of family with sequence similarity 47 member D, pseudogene, humanhuman

BASIC

Gene FAM47DP, Length 3,290 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM47DP-201ENST00000402340 TMEM154Q6P9G4 183 aa12.99□□□□□ -0.33
FAM47DP-201ENST00000402340 EP400NLQ6ZTU2 488 aa12.99□□□□□ -0.33
FAM47DP-201ENST00000402340 PRPF39Q86UA1 669 aaKnown RBP12.99□□□□□ -0.33
FAM47DP-201ENST00000402340 TRIM42Q8IWZ5 723 aa12.99□□□□□ -0.33
FAM47DP-201ENST00000402340 KCTD6Q8NC69 237 aa12.99□□□□□ -0.33
FAM47DP-201ENST00000402340 SPATA18Q8TC71 538 aa12.99□□□□□ -0.33
FAM47DP-201ENST00000402340 MRPL4Q9BYD3 311 aaKnown RBP12.99□□□□□ -0.33
FAM47DP-201ENST00000402340 YIPF3Q9GZM5 350 aa12.99□□□□□ -0.33
FAM47DP-201ENST00000402340 USP18Q9UMW8 372 aa12.99□□□□□ -0.33
FAM47DP-201ENST00000402340 RFPL1O75677 317 aa12.98□□□□□ -0.33
FAM47DP-201ENST00000402340 TMEM132BQ14DG7 1078 aa12.98□□□□□ -0.33
FAM47DP-201ENST00000402340 TAF5Q15542 800 aa12.98□□□□□ -0.33
FAM47DP-201ENST00000402340 ILDR2Q71H61 639 aa12.98□□□□□ -0.33
FAM47DP-201ENST00000402340 RFX6Q8HWS3 928 aa12.98□□□□□ -0.33
FAM47DP-201ENST00000402340 VPS52Q8N1B4 723 aa12.98□□□□□ -0.33
FAM47DP-201ENST00000402340 UCMAQ8WVF2 138 aa12.98□□□□□ -0.33
FAM47DP-201ENST00000402340 TTC17Q96AE7 1141 aa12.98□□□□□ -0.33
FAM47DP-201ENST00000402340 MCUR1Q96AQ8 359 aa12.98□□□□□ -0.33
FAM47DP-201ENST00000402340 POPDC2Q9HBU9 364 aa12.98□□□□□ -0.33
FAM47DP-201ENST00000402340 PTPRHQ9HD43 1115 aa12.98□□□□□ -0.33
FAM47DP-201ENST00000402340 MYOZ2Q9NPC6 264 aa12.98□□□□□ -0.33
FAM47DP-201ENST00000402340 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.98□□□□□ -0.33
FAM47DP-201ENST00000402340 MAP3K13O43283 966 aa12.98□□□□□ -0.33
FAM47DP-201ENST00000402340 GSTA2P09210 222 aa12.98□□□□□ -0.33
FAM47DP-201ENST00000402340 NRLP54845 237 aa12.98□□□□□ -0.33
FAM47DP-201ENST00000402340 YWHAZP63104 245 aaKnown RBP12.98□□□□□ -0.33
FAM47DP-201ENST00000402340 ROR1Q01973 937 aa12.98□□□□□ -0.33
FAM47DP-201ENST00000402340 ZNF699Q32M78 642 aa12.98□□□□□ -0.33
FAM47DP-201ENST00000402340 NET1Q7Z628 596 aaPredicted RBP12.98□□□□□ -0.33
FAM47DP-201ENST00000402340 TREML1Q86YW5 311 aa12.98□□□□□ -0.33
FAM47DP-201ENST00000402340 SCYL3Q8IZE3 742 aa12.98□□□□□ -0.33
FAM47DP-201ENST00000402340 ARHGAP24Q8N264 748 aa12.98□□□□□ -0.33
FAM47DP-201ENST00000402340 PEBP4Q96S96 227 aa12.98□□□□□ -0.33
FAM47DP-201ENST00000402340 C1orf21Q9H246 121 aa12.98□□□□□ -0.33
FAM47DP-201ENST00000402340 ZNF277Q9NRM2 450 aaPredicted RBP12.98□□□□□ -0.33
FAM47DP-201ENST00000402340 METTL5Q9NRN9 209 aaKnown RBP12.98□□□□□ -0.33
FAM47DP-201ENST00000402340 EME2A4GXA9 379 aaPredicted RBP12.98□□□□□ -0.33
FAM47DP-201ENST00000402340 MAGEA3P43357 314 aa12.98□□□□□ -0.33
FAM47DP-201ENST00000402340 ZBTB16Q05516 673 aa12.98□□□□□ -0.33
FAM47DP-201ENST00000402340 CCDC6Q16204 474 aa12.98□□□□□ -0.33
FAM47DP-201ENST00000402340 GSTA3Q16772 222 aa12.98□□□□□ -0.33
FAM47DP-201ENST00000402340 ALYREFQ86V81 257 aaKnown RBP12.98□□□□□ -0.33
FAM47DP-201ENST00000402340 EMC1Q8N766 993 aa12.98□□□□□ -0.33
FAM47DP-201ENST00000402340 CCDC106Q9BWC9 280 aa12.98□□□□□ -0.33
FAM47DP-201ENST00000402340 IKBKGQ9Y6K9 419 aa12.98□□□□□ -0.33
FAM47DP-201ENST00000402340 C2orf71A6NGG8 1288 aa12.97□□□□□ -0.33
FAM47DP-201ENST00000402340 COPEO14579 308 aa12.97□□□□□ -0.33
FAM47DP-201ENST00000402340 SNRPAP09012 282 aaKnown RBP12.97□□□□□ -0.33
FAM47DP-201ENST00000402340 ZNF143P52747 638 aaPredicted RBP12.97□□□□□ -0.33
FAM47DP-201ENST00000402340 TBCCQ15814 346 aa12.97□□□□□ -0.33
FAM47DP-201ENST00000402340 FAM47CQ5HY64 1035 aa12.97□□□□□ -0.33
FAM47DP-201ENST00000402340 MYLK4Q86YV6 388 aaPredicted RBP12.97□□□□□ -0.33
FAM47DP-201ENST00000402340 ZFAND2BQ8WV99 257 aa12.97□□□□□ -0.33
FAM47DP-201ENST00000402340 SDCBP2Q9H190 292 aa12.97□□□□□ -0.33
FAM47DP-201ENST00000402340 VCXQ9H320 206 aa12.97□□□□□ -0.33
FAM47DP-201ENST00000402340 ACAD9Q9H845 621 aa12.97□□□□□ -0.33
FAM47DP-201ENST00000402340 PAK5Q9P286 719 aa12.97□□□□□ -0.33
FAM47DP-201ENST00000402340 TM7SF2O76062 418 aa12.97□□□□□ -0.33
FAM47DP-201ENST00000402340 CALRP27797 417 aaKnown RBP12.97□□□□□ -0.33
FAM47DP-201ENST00000402340 PGM1P36871 562 aa12.97□□□□□ -0.33
FAM47DP-201ENST00000402340 MTM1Q13496 603 aa12.97□□□□□ -0.33
FAM47DP-201ENST00000402340 TRPC3Q13507 836 aa12.97□□□□□ -0.33
FAM47DP-201ENST00000402340 CAND1Q86VP6 1230 aaKnown RBP12.97□□□□□ -0.33
FAM47DP-201ENST00000402340 KBTBD2Q8IY47 623 aa12.97□□□□□ -0.33
FAM47DP-201ENST00000402340 DNERQ8NFT8 737 aa12.97□□□□□ -0.33
FAM47DP-201ENST00000402340 CCDC110Q8TBZ0 833 aa12.97□□□□□ -0.33
FAM47DP-201ENST00000402340 LRRC39Q96DD0 335 aa12.97□□□□□ -0.33
FAM47DP-201ENST00000402340 SH3GL3Q99963 347 aa12.97□□□□□ -0.33
FAM47DP-201ENST00000402340 ZNF112Q9UJU3 913 aa12.97□□□□□ -0.33
FAM47DP-201ENST00000402340 EIF4E1BA6NMX2 242 aaKnown RBP12.96□□□□□ -0.33
FAM47DP-201ENST00000402340 CXorf49A8MYA2 514 aaPredicted RBP12.96□□□□□ -0.33
FAM47DP-201ENST00000402340 TRIM49D1C9J1S8 452 aa12.96□□□□□ -0.33
FAM47DP-201ENST00000402340 KRT37O76014 449 aa12.96□□□□□ -0.33
FAM47DP-201ENST00000402340 UPP2O95045 317 aa12.96□□□□□ -0.33
FAM47DP-201ENST00000402340 AMPD1P23109 780 aa12.96□□□□□ -0.33
FAM47DP-201ENST00000402340 PEX19P40855 299 aa12.96□□□□□ -0.33
FAM47DP-201ENST00000402340 ACTR3P61158 418 aa12.96□□□□□ -0.33
FAM47DP-201ENST00000402340 BST1Q10588 318 aa12.96□□□□□ -0.33
FAM47DP-201ENST00000402340 DBN1Q16643 649 aa12.96□□□□□ -0.33
FAM47DP-201ENST00000402340 ATG16L1Q676U5 607 aa12.96□□□□□ -0.33
FAM47DP-201ENST00000402340 SPDYE1Q8NFV5 336 aaPredicted RBP12.96□□□□□ -0.33
FAM47DP-201ENST00000402340 PRPF31Q8WWY3 499 aaKnown RBP12.96□□□□□ -0.33
FAM47DP-201ENST00000402340 USP6NLQ92738 828 aa12.96□□□□□ -0.33
FAM47DP-201ENST00000402340 MTBPQ96DY7 904 aa12.96□□□□□ -0.33
FAM47DP-201ENST00000402340 TRAPPC9Q96Q05 1148 aa12.96□□□□□ -0.33
FAM47DP-201ENST00000402340 ZNF184Q99676 751 aaPredicted RBP12.96□□□□□ -0.33
FAM47DP-201ENST00000402340 TEX13BQ9BXU2 312 aa12.96□□□□□ -0.33
FAM47DP-201ENST00000402340 ANK1P16157 1881 aa12.96□□□□□ -0.33
FAM47DP-201ENST00000402340 BIRC5O15392 142 aa12.96□□□□□ -0.33
FAM47DP-201ENST00000402340 AVILO75366 819 aa12.96□□□□□ -0.33
FAM47DP-201ENST00000402340 NEFHP12036 1026 aa12.96□□□□□ -0.33
FAM47DP-201ENST00000402340 IL4RP24394 825 aa12.96□□□□□ -0.33
FAM47DP-201ENST00000402340 ZNF280AP59817 542 aaPredicted RBP12.96□□□□□ -0.33
FAM47DP-201ENST00000402340 YWHAGP61981 247 aaKnown RBP eCLIP12.96□□□□□ -0.33
FAM47DP-201ENST00000402340 MXRA7P84157 204 aa12.96□□□□□ -0.33
FAM47DP-201ENST00000402340 CXCL9Q07325 125 aa12.96□□□□□ -0.33
FAM47DP-201ENST00000402340 TNFAIP1Q13829 316 aa12.96□□□□□ -0.33
FAM47DP-201ENST00000402340 STXBP2Q15833 593 aa12.96□□□□□ -0.33
FAM47DP-201ENST00000402340 NPNTQ6UXI9 565 aa12.96□□□□□ -0.33
FAM47DP-201ENST00000402340 KYAT3Q6YP21 454 aaKnown RBP12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms