RNA–Protein interactions for RNA: ENST00000400337.6

COL18A1-204, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL18A1, Length 5,436 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-204ENST00000400337 MRNIPQ6NTE8 343 aa18.82■□□□□ 0.6
COL18A1-204ENST00000400337 OR9Q1Q8NGQ5 310 aa18.82■□□□□ 0.6
COL18A1-204ENST00000400337 DNAJB3Q8WWF6 145 aa18.82■□□□□ 0.6
COL18A1-204ENST00000400337 ANKZF1Q9H8Y5 726 aa18.82■□□□□ 0.6
COL18A1-204ENST00000400337 ARHGEF28Q8N1W1 1705 aaKnown RBP18.82■□□□□ 0.6
COL18A1-204ENST00000400337 H7C4K7 107 aa18.82■□□□□ 0.6
COL18A1-204ENST00000400337 CXCL11O14625 94 aa18.82■□□□□ 0.6
COL18A1-204ENST00000400337 JCHAINP01591 159 aa18.82■□□□□ 0.6
COL18A1-204ENST00000400337 AKAP5P24588 427 aa18.82■□□□□ 0.6
COL18A1-204ENST00000400337 GRAMD4Q6IC98 578 aa18.82■□□□□ 0.6
COL18A1-204ENST00000400337 DENND1BQ6P3S1 775 aa18.82■□□□□ 0.6
COL18A1-204ENST00000400337 PKN3Q6P5Z2 889 aa18.82■□□□□ 0.6
COL18A1-204ENST00000400337 ANKS3Q6ZW76 656 aa18.82■□□□□ 0.6
COL18A1-204ENST00000400337 TARSP26639 723 aaKnown RBP18.81■□□□□ 0.6
COL18A1-204ENST00000400337 PTENP60484 403 aa18.81■□□□□ 0.6
COL18A1-204ENST00000400337 LRRC74AQ0VAA2 488 aa18.81■□□□□ 0.6
COL18A1-204ENST00000400337 TBC1D19Q8N5T2 526 aa18.81■□□□□ 0.6
COL18A1-204ENST00000400337 MYCBPAPQ8TBZ2 947 aa18.81■□□□□ 0.6
COL18A1-204ENST00000400337 ILKAPQ9H0C8 392 aaPredicted RBP18.81■□□□□ 0.6
COL18A1-204ENST00000400337 LRRC40Q9H9A6 602 aa18.81■□□□□ 0.6
COL18A1-204ENST00000400337 RIC8BQ9NVN3 520 aa18.81■□□□□ 0.6
COL18A1-204ENST00000400337 PKD2L2Q9NZM6 624 aa18.81■□□□□ 0.6
COL18A1-204ENST00000400337 BAZ2BQ9UIF8 2168 aaKnown RBP18.81■□□□□ 0.6
COL18A1-204ENST00000400337 HEATR9A2RTY3 570 aa18.81■□□□□ 0.6
COL18A1-204ENST00000400337 C2orf81A6NN90 581 aa18.81■□□□□ 0.6
COL18A1-204ENST00000400337 C5orf58C9J3I9 102 aa18.81■□□□□ 0.6
COL18A1-204ENST00000400337 NKRFO15226 690 aaKnown RBP eCLIP18.81■□□□□ 0.61e-6■■■□□ 16.8
COL18A1-204ENST00000400337 VEGFAP15692 232 aaPredicted RBP18.81■□□□□ 0.6
COL18A1-204ENST00000400337 RHBDL3P58872 404 aa18.81■□□□□ 0.6
COL18A1-204ENST00000400337 TBX2Q13207 712 aaPredicted RBP18.81■□□□□ 0.6
COL18A1-204ENST00000400337 ZBTB45Q96K62 511 aaPredicted RBP18.81■□□□□ 0.6
COL18A1-204ENST00000400337 IARS2Q9NSE4 1012 aaKnown RBP18.81■□□□□ 0.6
COL18A1-204ENST00000400337 MRGBPQ9NV56 204 aa18.81■□□□□ 0.6
COL18A1-204ENST00000400337 FAM198AQ9UFP1 575 aa18.81■□□□□ 0.6
COL18A1-204ENST00000400337 DDX3XO00571 662 aaKnown RBP eCLIP18.81■□□□□ 0.67e-22■■□□□ 13.5
COL18A1-204ENST00000400337 SUPT7LO94864 414 aa18.81■□□□□ 0.6
COL18A1-204ENST00000400337 APOA4P06727 396 aa18.81■□□□□ 0.6
COL18A1-204ENST00000400337 KCNK10P57789 538 aa18.81■□□□□ 0.6
COL18A1-204ENST00000400337 GCNT1Q02742 428 aa18.81■□□□□ 0.6
COL18A1-204ENST00000400337 AGAP9Q5VTM2 703 aa18.81■□□□□ 0.6
COL18A1-204ENST00000400337 MAP1SQ66K74 1059 aaPredicted RBP18.81■□□□□ 0.6
COL18A1-204ENST00000400337 PGBD3Q8N328 593 aa18.81■□□□□ 0.6
COL18A1-204ENST00000400337 ADM5C9JUS6 153 aa18.81■□□□□ 0.6
COL18A1-204ENST00000400337 TFRCP02786 760 aaKnown RBP18.81■□□□□ 0.6
COL18A1-204ENST00000400337 NFIL3Q16649 462 aa18.81■□□□□ 0.6
COL18A1-204ENST00000400337 ZNF467Q7Z7K2 595 aaPredicted RBP18.81■□□□□ 0.6
COL18A1-204ENST00000400337 CHST12Q9NRB3 414 aa18.81■□□□□ 0.6
COL18A1-204ENST00000400337 TRMT6Q9UJA5 497 aaKnown RBP18.81■□□□□ 0.6
COL18A1-204ENST00000400337 SOAT2O75908 522 aa18.8■□□□□ 0.6
COL18A1-204ENST00000400337 ASS1P00966 412 aaKnown RBP18.8■□□□□ 0.6
COL18A1-204ENST00000400337 CLEC4FQ8N1N0 589 aa18.8■□□□□ 0.6
COL18A1-204ENST00000400337 PCSK9Q8NBP7 692 aaKnown RBP18.8■□□□□ 0.6
COL18A1-204ENST00000400337 ASCC2Q9H1I8 757 aaPredicted RBP18.8■□□□□ 0.6
COL18A1-204ENST00000400337 A1CFQ9NQ94 594 aaKnown RBP18.8■□□□□ 0.6
COL18A1-204ENST00000400337 DDX43Q9NXZ2 648 aaKnown RBP18.8■□□□□ 0.6
COL18A1-204ENST00000400337 DSEQ9UL01 958 aa18.8■□□□□ 0.6
COL18A1-204ENST00000400337 SKAP2O75563 359 aaPredicted RBP18.8■□□□□ 0.6
COL18A1-204ENST00000400337 CYP2F1P24903 491 aa18.8■□□□□ 0.6
COL18A1-204ENST00000400337 ATP6V1E1P36543 226 aa18.8■□□□□ 0.6
COL18A1-204ENST00000400337 TIGD7Q6NT04 549 aaPredicted RBP18.8■□□□□ 0.6
COL18A1-204ENST00000400337 SETD3Q86TU7 594 aaPredicted RBP18.8■□□□□ 0.6
COL18A1-204ENST00000400337 HEY2Q9UBP5 337 aa18.8■□□□□ 0.6
COL18A1-204ENST00000400337 DCDC2Q9UHG0 476 aa18.8■□□□□ 0.6
COL18A1-204ENST00000400337 VPS9D1Q9Y2B5 631 aa18.8■□□□□ 0.6
COL18A1-204ENST00000400337 MROH1Q8NDA8 1641 aa18.8■□□□□ 0.6
COL18A1-204ENST00000400337 FBXW4P57775 412 aa18.8■□□□□ 0.6
COL18A1-204ENST00000400337 CBWD6Q4V339 395 aa18.8■□□□□ 0.6
COL18A1-204ENST00000400337 CBWD3Q5JTY5 395 aa18.8■□□□□ 0.6
COL18A1-204ENST00000400337 CBWD5Q5RIA9 395 aa18.8■□□□□ 0.6
COL18A1-204ENST00000400337 SH3RF1Q7Z6J0 888 aa18.8■□□□□ 0.6
COL18A1-204ENST00000400337 ARHGAP26Q9UNA1 814 aa18.8■□□□□ 0.6
COL18A1-204ENST00000400337 CLCA2Q9UQC9 943 aa18.8■□□□□ 0.6
COL18A1-204ENST00000400337 GTF3C5Q9Y5Q8 519 aaPredicted RBP18.8■□□□□ 0.6
COL18A1-204ENST00000400337 ZSCAN5CA6NGD5 496 aaPredicted RBP18.8■□□□□ 0.6
COL18A1-204ENST00000400337 RASSF10A6NK89 507 aa18.8■□□□□ 0.6
COL18A1-204ENST00000400337 TISP43B9A030 160 aa18.8■□□□□ 0.6
COL18A1-204ENST00000400337 MBL2P11226 248 aaPredicted RBP18.8■□□□□ 0.6
COL18A1-204ENST00000400337 ACAT1P24752 427 aaKnown RBP18.8■□□□□ 0.6
COL18A1-204ENST00000400337 GLRBP48167 497 aa18.8■□□□□ 0.6
COL18A1-204ENST00000400337 UNC45BQ8IWX7 931 aa18.8■□□□□ 0.6
COL18A1-204ENST00000400337 NAT9Q9BTE0 207 aa18.8■□□□□ 0.6
COL18A1-204ENST00000400337 SEMA4AQ9H3S1 761 aa18.8■□□□□ 0.6
COL18A1-204ENST00000400337 GID8Q9NWU2 228 aa18.8■□□□□ 0.6
COL18A1-204ENST00000400337 RUVBL2Q9Y230 463 aaKnown RBP18.8■□□□□ 0.6
COL18A1-204ENST00000400337 GAKO14976 1311 aa18.8■□□□□ 0.6
COL18A1-204ENST00000400337 SLC12A8A0AV02 714 aa18.79■□□□□ 0.6
COL18A1-204ENST00000400337 TIMM44O43615 452 aa18.79■□□□□ 0.6
COL18A1-204ENST00000400337 FKBP9O95302 570 aa18.79■□□□□ 0.6
COL18A1-204ENST00000400337 CYP3A4P08684 503 aa18.79■□□□□ 0.6
COL18A1-204ENST00000400337 CCND1P24385 295 aa18.79■□□□□ 0.6
COL18A1-204ENST00000400337 FLOT2Q14254 428 aa18.79■□□□□ 0.6
COL18A1-204ENST00000400337 FKBP9P1Q75LS8 142 aa18.79■□□□□ 0.6
COL18A1-204ENST00000400337 GALNT4Q8N4A0 578 aa18.79■□□□□ 0.6
COL18A1-204ENST00000400337 OTUB1Q96FW1 271 aaPredicted RBP18.79■□□□□ 0.6
COL18A1-204ENST00000400337 CDKN2AIPQ9NXV6 580 aaPredicted RBP18.79■□□□□ 0.6
COL18A1-204ENST00000400337 TRPC5OSA6NMA1 111 aa18.79■□□□□ 0.6
COL18A1-204ENST00000400337 ACKR2O00590 384 aa18.79■□□□□ 0.6
COL18A1-204ENST00000400337 ENDOD1O94919 500 aa18.79■□□□□ 0.6
COL18A1-204ENST00000400337 SERPINB8P50452 374 aa18.79■□□□□ 0.6
COL18A1-204ENST00000400337 CDH8P55286 799 aa18.79■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms