RNA–Protein interactions for RNA: ENST00000397901.7

CHMP1A-201, Transcript of charged multivesicular body protein 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP1A, Length 2,483 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-201ENST00000397901 ACTL9Q8TC94 416 aa16.65■□□□□ 0.26
CHMP1A-201ENST00000397901 CPT1BQ92523 772 aa16.65■□□□□ 0.26
CHMP1A-201ENST00000397901 YIPF2Q9BWQ6 316 aa16.65■□□□□ 0.26
CHMP1A-201ENST00000397901 DNAJB4Q9UDY4 337 aa16.65■□□□□ 0.26
CHMP1A-201ENST00000397901 FARP1Q9Y4F1 1045 aaPredicted RBP16.65■□□□□ 0.26
CHMP1A-201ENST00000397901 RIPK3Q9Y572 518 aa16.65■□□□□ 0.26
CHMP1A-201ENST00000397901 TCRBV7S3A2A0A539 114 aa16.65■□□□□ 0.26
CHMP1A-201ENST00000397901 PSAPP07602 524 aa16.65■□□□□ 0.26
CHMP1A-201ENST00000397901 HNRNPCP07910 306 aaKnown RBP eCLIP16.65■□□□□ 0.26
CHMP1A-201ENST00000397901 NR3C2P08235 984 aa16.65■□□□□ 0.26
CHMP1A-201ENST00000397901 PHBP35232 272 aa16.65■□□□□ 0.26
CHMP1A-201ENST00000397901 ARL4CP56559 192 aa16.65■□□□□ 0.26
CHMP1A-201ENST00000397901 FAM182AQ5T1J6 154 aa16.65■□□□□ 0.26
CHMP1A-201ENST00000397901 LRRC6Q86X45 466 aa16.65■□□□□ 0.26
CHMP1A-201ENST00000397901 RDM1Q8NG50 284 aa16.65■□□□□ 0.26
CHMP1A-201ENST00000397901 SLC35B2Q8TB61 432 aa16.65■□□□□ 0.26
CHMP1A-201ENST00000397901 PRR11Q96HE9 360 aaPredicted RBP16.65■□□□□ 0.26
CHMP1A-201ENST00000397901 MANSC1Q9H8J5 431 aa16.65■□□□□ 0.26
CHMP1A-201ENST00000397901 RMI1Q9H9A7 625 aa16.65■□□□□ 0.26
CHMP1A-201ENST00000397901 PCDH18Q9HCL0 1135 aa16.65■□□□□ 0.26
CHMP1A-201ENST00000397901 HEY2Q9UBP5 337 aa16.65■□□□□ 0.26
CHMP1A-201ENST00000397901 MYH9P35579 1960 aaKnown RBP16.65■□□□□ 0.26
CHMP1A-201ENST00000397901 CALB1P05937 261 aa16.64■□□□□ 0.26
CHMP1A-201ENST00000397901 KCNA2P16389 499 aa16.64■□□□□ 0.26
CHMP1A-201ENST00000397901 EIF4BP23588 611 aaKnown RBP16.64■□□□□ 0.26
CHMP1A-201ENST00000397901 CCND2P30279 289 aa16.64■□□□□ 0.26
CHMP1A-201ENST00000397901 HNRNPDQ14103 355 aaKnown RBP16.64■□□□□ 0.26
CHMP1A-201ENST00000397901 EMC2Q15006 297 aa16.64■□□□□ 0.26
CHMP1A-201ENST00000397901 LRRC38Q5VT99 294 aa16.64■□□□□ 0.26
CHMP1A-201ENST00000397901 PPIL6Q8IXY8 311 aa16.64■□□□□ 0.26
CHMP1A-201ENST00000397901 NMD3Q96D46 503 aaKnown RBP16.64■□□□□ 0.26
CHMP1A-201ENST00000397901 CGRRF1Q99675 332 aa16.64■□□□□ 0.26
CHMP1A-201ENST00000397901 FBXO6Q9NRD1 293 aaPredicted RBP16.64■□□□□ 0.26
CHMP1A-201ENST00000397901 FBXO40Q9UH90 709 aa16.64■□□□□ 0.26
CHMP1A-201ENST00000397901 SH3GLB1Q9Y371 365 aa16.64■□□□□ 0.26
CHMP1A-201ENST00000397901 PARP14Q460N5 1801 aa16.64■□□□□ 0.25
CHMP1A-201ENST00000397901 ZNF189O75820 626 aaPredicted RBP16.64■□□□□ 0.25
CHMP1A-201ENST00000397901 EDN1P05305 212 aa16.64■□□□□ 0.25
CHMP1A-201ENST00000397901 RAP1GDS1P52306 607 aa16.64■□□□□ 0.25
CHMP1A-201ENST00000397901 GPAT2Q6NUI2 795 aa16.64■□□□□ 0.25
CHMP1A-201ENST00000397901 ADGRD1Q6QNK2 874 aa16.64■□□□□ 0.25
CHMP1A-201ENST00000397901 RINLQ6ZS11 566 aa16.64■□□□□ 0.25
CHMP1A-201ENST00000397901 SAMD7Q7Z3H4 446 aa16.64■□□□□ 0.25
CHMP1A-201ENST00000397901 VSIG10LQ86VR7 867 aa16.64■□□□□ 0.25
CHMP1A-201ENST00000397901 PALM2Q8IXS6 379 aa16.64■□□□□ 0.25
CHMP1A-201ENST00000397901 ZNF276Q8N554 614 aa16.64■□□□□ 0.25
CHMP1A-201ENST00000397901 DGCR14Q96DF8 476 aaKnown RBP16.64■□□□□ 0.25
CHMP1A-201ENST00000397901 MAML3Q96JK9 1138 aa16.64■□□□□ 0.25
CHMP1A-201ENST00000397901 PPCSQ9HAB8 311 aa16.64■□□□□ 0.25
CHMP1A-201ENST00000397901 JPH1Q9HDC5 661 aaPredicted RBP16.64■□□□□ 0.25
CHMP1A-201ENST00000397901 RNF146Q9NTX7 359 aa16.64■□□□□ 0.25
CHMP1A-201ENST00000397901 NDE1Q9NXR1 346 aa16.64■□□□□ 0.25
CHMP1A-201ENST00000397901 CNTN6Q9UQ52 1028 aa16.64■□□□□ 0.25
CHMP1A-201ENST00000397901 DOCK5Q9H7D0 1870 aa16.64■□□□□ 0.25
CHMP1A-201ENST00000397901 TCRBV5S1A1TA0A578 114 aa16.63■□□□□ 0.25
CHMP1A-201ENST00000397901 C2orf71A6NGG8 1288 aa16.63■□□□□ 0.25
CHMP1A-201ENST00000397901 CST8O60676 142 aa16.63■□□□□ 0.25
CHMP1A-201ENST00000397901 CST3P01034 146 aaPredicted RBP16.63■□□□□ 0.25
CHMP1A-201ENST00000397901 GMPSP49915 693 aaPredicted RBP16.63■□□□□ 0.25
CHMP1A-201ENST00000397901 NRLP54845 237 aa16.63■□□□□ 0.25
CHMP1A-201ENST00000397901 ADARP55265 1226 aaKnown RBP16.63■□□□□ 0.25
CHMP1A-201ENST00000397901 CDC16Q13042 620 aa16.63■□□□□ 0.25
CHMP1A-201ENST00000397901 RASA2Q15283 850 aa16.63■□□□□ 0.25
CHMP1A-201ENST00000397901 SYCP2LQ5T4T6 812 aa16.63■□□□□ 0.25
CHMP1A-201ENST00000397901 MICALL2Q8IY33 904 aa16.63■□□□□ 0.25
CHMP1A-201ENST00000397901 BANPQ8N9N5 519 aa16.63■□□□□ 0.25
CHMP1A-201ENST00000397901 SMYD1Q8NB12 490 aa16.63■□□□□ 0.25
CHMP1A-201ENST00000397901 DEPTORQ8TB45 409 aa16.63■□□□□ 0.25
CHMP1A-201ENST00000397901 MZB1Q8WU39 189 aa16.63■□□□□ 0.25
CHMP1A-201ENST00000397901 ACSS3Q9H6R3 686 aa16.63■□□□□ 0.25
CHMP1A-201ENST00000397901 TAS2R1Q9NYW7 299 aa16.63■□□□□ 0.25
CHMP1A-201ENST00000397901 HACL1Q9UJ83 578 aa16.63■□□□□ 0.25
CHMP1A-201ENST00000397901 SNCAIPQ9Y6H5 919 aa16.63■□□□□ 0.25
CHMP1A-201ENST00000397901 H0YCG3 227 aa16.63■□□□□ 0.25
CHMP1A-201ENST00000397901 K7ERI5 159 aa16.63■□□□□ 0.25
CHMP1A-201ENST00000397901 RGS20O76081 388 aa16.63■□□□□ 0.25
CHMP1A-201ENST00000397901 TMEM63AO94886 807 aa16.63■□□□□ 0.25
CHMP1A-201ENST00000397901 RPL22P35268 128 aaKnown RBP16.63■□□□□ 0.25
CHMP1A-201ENST00000397901 PGM1P36871 562 aa16.63■□□□□ 0.25
CHMP1A-201ENST00000397901 ZNF132P52740 706 aa16.63■□□□□ 0.25
CHMP1A-201ENST00000397901 ACTR2P61160 394 aa16.63■□□□□ 0.25
CHMP1A-201ENST00000397901 AP2B1P63010 937 aa16.63■□□□□ 0.25
CHMP1A-201ENST00000397901 ZBTB16Q05516 673 aa16.63■□□□□ 0.25
CHMP1A-201ENST00000397901 MTMR2Q13614 643 aa16.63■□□□□ 0.25
CHMP1A-201ENST00000397901 GRM2Q14416 872 aa16.63■□□□□ 0.25
CHMP1A-201ENST00000397901 KLHL38Q2WGJ6 581 aa16.63■□□□□ 0.25
CHMP1A-201ENST00000397901 SCARA5Q6ZMJ2 495 aa16.63■□□□□ 0.25
CHMP1A-201ENST00000397901 NAT8LQ8N9F0 302 aa16.63■□□□□ 0.25
CHMP1A-201ENST00000397901 DCAKDQ8WVC6 231 aa16.63■□□□□ 0.25
CHMP1A-201ENST00000397901 RSAD2Q8WXG1 361 aa16.63■□□□□ 0.25
CHMP1A-201ENST00000397901 ABTB1Q969K4 478 aaPredicted RBP16.63■□□□□ 0.25
CHMP1A-201ENST00000397901 TSSK1BQ9BXA7 367 aa16.63■□□□□ 0.25
CHMP1A-201ENST00000397901 TRIM55Q9BYV6 548 aa16.63■□□□□ 0.25
CHMP1A-201ENST00000397901 IMPG2Q9BZV3 1241 aa16.63■□□□□ 0.25
CHMP1A-201ENST00000397901 MAF1Q9H063 256 aa16.63■□□□□ 0.25
CHMP1A-201ENST00000397901 SSU72Q9NP77 194 aaKnown RBP16.63■□□□□ 0.25
CHMP1A-201ENST00000397901 DDX56Q9NY93 547 aaKnown RBP16.63■□□□□ 0.25
CHMP1A-201ENST00000397901 MAP3K20Q9NYL2 800 aaKnown RBP16.63■□□□□ 0.25
CHMP1A-201ENST00000397901 TUBGCP4Q9UGJ1 667 aa16.63■□□□□ 0.25
CHMP1A-201ENST00000397901 STYXL1Q9Y6J8 313 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms