RNA–Protein interactions for RNA: ENST00000383861.1

RNU1-28P-201, Transcript of RNA, U1 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU1-28P, Length 164 nt, Biotype snRNA, Subcellular localisation Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-28P-201ENST00000383861 BTBD6Q96KE9 485 aa9.28□□□□□ -0.92
RNU1-28P-201ENST00000383861 CLSTN3Q9BQT9 956 aa9.28□□□□□ -0.92
RNU1-28P-201ENST00000383861 C11orf84Q9BUA3 381 aaPredicted RBP9.28□□□□□ -0.92
RNU1-28P-201ENST00000383861 DDX23Q9BUQ8 820 aaKnown RBP9.28□□□□□ -0.92
RNU1-28P-201ENST00000383861 VN1R3Q9BXE9 311 aa9.28□□□□□ -0.92
RNU1-28P-201ENST00000383861 EMILIN2Q9BXX0 1053 aa9.28□□□□□ -0.92
RNU1-28P-201ENST00000383861 ULBP1Q9BZM6 244 aa9.28□□□□□ -0.92
RNU1-28P-201ENST00000383861 POPDC2Q9HBU9 364 aa9.28□□□□□ -0.92
RNU1-28P-201ENST00000383861 RXFP1Q9HBX9 757 aa9.28□□□□□ -0.92
RNU1-28P-201ENST00000383861 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP9.28□□□□□ -0.92
RNU1-28P-201ENST00000383861 TJP2Q9UDY2 1190 aa9.28□□□□□ -0.92
RNU1-28P-201ENST00000383861 CHORDC1Q9UHD1 332 aaPredicted RBP9.28□□□□□ -0.92
RNU1-28P-201ENST00000383861 PCDHA11Q9Y5I1 949 aa9.28□□□□□ -0.92
RNU1-28P-201ENST00000383861 USP3Q9Y6I4 520 aa9.28□□□□□ -0.92
RNU1-28P-201ENST00000383861 ALPK3Q96L96 1907 aa9.28□□□□□ -0.92
RNU1-28P-201ENST00000383861 PIK3R2O00459 728 aa9.27□□□□□ -0.93
RNU1-28P-201ENST00000383861 CAPN9O14815 690 aa9.27□□□□□ -0.93
RNU1-28P-201ENST00000383861 FANCGO15287 622 aa9.27□□□□□ -0.93
RNU1-28P-201ENST00000383861 DDX3YO15523 660 aaKnown RBP9.27□□□□□ -0.93
RNU1-28P-201ENST00000383861 NCK2O43639 380 aa9.27□□□□□ -0.93
RNU1-28P-201ENST00000383861 GABBR2O75899 941 aa9.27□□□□□ -0.93
RNU1-28P-201ENST00000383861 ABLIM3O94929 683 aa9.27□□□□□ -0.93
RNU1-28P-201ENST00000383861 F9P00740 461 aa9.27□□□□□ -0.93
RNU1-28P-201ENST00000383861 LTFP02788 710 aa9.27□□□□□ -0.93
RNU1-28P-201ENST00000383861 ATF2P15336 505 aa9.27□□□□□ -0.93
RNU1-28P-201ENST00000383861 CTNNB1P35222 781 aa9.27□□□□□ -0.93
RNU1-28P-201ENST00000383861 SSR1P43307 286 aaKnown RBP9.27□□□□□ -0.93
RNU1-28P-201ENST00000383861 PSEN1P49768 467 aa9.27□□□□□ -0.93
RNU1-28P-201ENST00000383861 SLC5A3P53794 718 aa9.27□□□□□ -0.93
RNU1-28P-201ENST00000383861 TERF1P54274 439 aa9.27□□□□□ -0.93
RNU1-28P-201ENST00000383861 ROR1Q01973 937 aa9.27□□□□□ -0.93
RNU1-28P-201ENST00000383861 ITIH3Q06033 890 aa9.27□□□□□ -0.93
RNU1-28P-201ENST00000383861 ADCY1Q08828 1119 aa9.27□□□□□ -0.93
RNU1-28P-201ENST00000383861 PLD1Q13393 1074 aa9.27□□□□□ -0.93
RNU1-28P-201ENST00000383861 SMC1AQ14683 1233 aaKnown RBP9.27□□□□□ -0.93
RNU1-28P-201ENST00000383861 CCDC142Q17RM4 750 aa9.27□□□□□ -0.93
RNU1-28P-201ENST00000383861 SLC25A52Q3SY17 297 aa9.27□□□□□ -0.93
RNU1-28P-201ENST00000383861 MGAT5BQ3V5L5 792 aa9.27□□□□□ -0.93
RNU1-28P-201ENST00000383861 SEL1L2Q5TEA6 688 aa9.27□□□□□ -0.93
RNU1-28P-201ENST00000383861 LLGL2Q6P1M3 1020 aa9.27□□□□□ -0.93
RNU1-28P-201ENST00000383861 RNF19BQ6ZMZ0 732 aa9.27□□□□□ -0.93
RNU1-28P-201ENST00000383861 STRADAQ7RTN6 431 aa9.27□□□□□ -0.93
RNU1-28P-201ENST00000383861 MON1AQ86VX9 555 aa9.27□□□□□ -0.93
RNU1-28P-201ENST00000383861 RCOR2Q8IZ40 523 aa9.27□□□□□ -0.93
RNU1-28P-201ENST00000383861 KLHL23Q8NBE8 558 aa9.27□□□□□ -0.93
RNU1-28P-201ENST00000383861 ATAD1Q8NBU5 361 aa9.27□□□□□ -0.93
RNU1-28P-201ENST00000383861 JOSD2Q8TAC2 188 aa9.27□□□□□ -0.93
RNU1-28P-201ENST00000383861 ACTRT1Q8TDG2 376 aa9.27□□□□□ -0.93
RNU1-28P-201ENST00000383861 MAIP1Q8WWC4 291 aa9.27□□□□□ -0.93
RNU1-28P-201ENST00000383861 FAM149B1Q96BN6 582 aa9.27□□□□□ -0.93
RNU1-28P-201ENST00000383861 RBM41Q96IZ5 413 aaKnown RBP9.27□□□□□ -0.93
RNU1-28P-201ENST00000383861 B3GALT6Q96L58 329 aa9.27□□□□□ -0.93
RNU1-28P-201ENST00000383861 SLC2A13Q96QE2 648 aa9.27□□□□□ -0.93
RNU1-28P-201ENST00000383861 UBE2OQ9C0C9 1292 aaKnown RBP9.27□□□□□ -0.93
RNU1-28P-201ENST00000383861 ZBP1Q9H171 429 aa9.27□□□□□ -0.93
RNU1-28P-201ENST00000383861 NGRNQ9NPE2 291 aaKnown RBP9.27□□□□□ -0.93
RNU1-28P-201ENST00000383861 IL37Q9NZH6 218 aa9.27□□□□□ -0.93
RNU1-28P-201ENST00000383861 TTC7AQ9ULT0 858 aaPredicted RBP9.27□□□□□ -0.93
RNU1-28P-201ENST00000383861 SCML2Q9UQR0 700 aa9.27□□□□□ -0.93
RNU1-28P-201ENST00000383861 USTQ9Y2C2 406 aa9.27□□□□□ -0.93
RNU1-28P-201ENST00000383861 IRAK3Q9Y616 596 aa9.27□□□□□ -0.93
RNU1-28P-201ENST00000383861 HSFX4A0A1B0GTS1 333 aaPredicted RBP9.26□□□□□ -0.93
RNU1-28P-201ENST00000383861 HSFX3A0A1B0GWH4 333 aaPredicted RBP9.26□□□□□ -0.93
RNU1-28P-201ENST00000383861 WDR27A2RRH5 827 aa9.26□□□□□ -0.93
RNU1-28P-201ENST00000383861 CTAGE15A4D2H0 777 aa9.26□□□□□ -0.93
RNU1-28P-201ENST00000383861 LINC01553A4QN01 128 aa9.26□□□□□ -0.93
RNU1-28P-201ENST00000383861 PGRMC1O00264 195 aaKnown RBP9.26□□□□□ -0.93
RNU1-28P-201ENST00000383861 C2CD2LO14523 706 aa9.26□□□□□ -0.93
RNU1-28P-201ENST00000383861 TNFRSF10BO14763 440 aa9.26□□□□□ -0.93
RNU1-28P-201ENST00000383861 PRPSAP2O60256 369 aa9.26□□□□□ -0.93
RNU1-28P-201ENST00000383861 CEP104O60308 925 aa9.26□□□□□ -0.93
RNU1-28P-201ENST00000383861 LILRB3O75022 631 aa9.26□□□□□ -0.93
RNU1-28P-201ENST00000383861 ZRANB2O95218 330 aaKnown RBP eCLIP9.26□□□□□ -0.93
RNU1-28P-201ENST00000383861 GJB6O95452 261 aa9.26□□□□□ -0.93
RNU1-28P-201ENST00000383861 CXCL14O95715 111 aa9.26□□□□□ -0.93
RNU1-28P-201ENST00000383861 ADH1AP07327 375 aa9.26□□□□□ -0.93
RNU1-28P-201ENST00000383861 USP17L7P0C7H9 530 aa9.26□□□□□ -0.93
RNU1-28P-201ENST00000383861 LINC00271P0C7V0 271 aa9.26□□□□□ -0.93
RNU1-28P-201ENST00000383861 CTAGE8P0CG41 777 aa9.26□□□□□ -0.93
RNU1-28P-201ENST00000383861 CSH1P0DML2 217 aa9.26□□□□□ -0.93
RNU1-28P-201ENST00000383861 CSH2P0DML3 217 aa9.26□□□□□ -0.93
RNU1-28P-201ENST00000383861 YWHAQP27348 245 aa9.26□□□□□ -0.93
RNU1-28P-201ENST00000383861 GBP1P32455 592 aa9.26□□□□□ -0.93
RNU1-28P-201ENST00000383861 FLT3P36888 993 aa9.26□□□□□ -0.93
RNU1-28P-201ENST00000383861 ALDH1A3P47895 512 aa9.26□□□□□ -0.93
RNU1-28P-201ENST00000383861 PPP3CCP48454 512 aa9.26□□□□□ -0.93
RNU1-28P-201ENST00000383861 PEX5P50542 639 aa9.26□□□□□ -0.93
RNU1-28P-201ENST00000383861 CACNA2D1P54289 1103 aa9.26□□□□□ -0.93
RNU1-28P-201ENST00000383861 AIF1P55008 147 aa9.26□□□□□ -0.93
RNU1-28P-201ENST00000383861 COPS2P61201 443 aa9.26□□□□□ -0.93
RNU1-28P-201ENST00000383861 DUSP4Q13115 394 aa9.26□□□□□ -0.93
RNU1-28P-201ENST00000383861 VEPH1Q14D04 833 aa9.26□□□□□ -0.93
RNU1-28P-201ENST00000383861 SHHQ15465 462 aa9.26□□□□□ -0.93
RNU1-28P-201ENST00000383861 RAB30Q15771 203 aa9.26□□□□□ -0.93
RNU1-28P-201ENST00000383861 PPP2R5EQ16537 467 aa9.26□□□□□ -0.93
RNU1-28P-201ENST00000383861 CCDC14Q49A88 953 aa9.26□□□□□ -0.93
RNU1-28P-201ENST00000383861 BOLA3Q53S33 107 aa9.26□□□□□ -0.93
RNU1-28P-201ENST00000383861 RSPO2Q6UXX9 243 aaPredicted RBP9.26□□□□□ -0.93
RNU1-28P-201ENST00000383861 DENND5BQ6ZUT9 1274 aa9.26□□□□□ -0.93
RNU1-28P-201ENST00000383861 SND1Q7KZF4 910 aaKnown RBP eCLIP9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms