RNA–Protein interactions for RNA: ENST00000381150.5

SDC1-202, Transcript of syndecan 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SDC1, Length 3,291 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC1-202ENST00000381150 HMGCS2P54868 508 aa14.43□□□□□ -0.1
SDC1-202ENST00000381150 GPX6P59796 221 aa14.43□□□□□ -0.1
SDC1-202ENST00000381150 CLEC16AQ2KHT3 1053 aa14.43□□□□□ -0.1
SDC1-202ENST00000381150 PAOXQ6QHF9 649 aa14.43□□□□□ -0.1
SDC1-202ENST00000381150 TAS1R3Q7RTX0 852 aa14.43□□□□□ -0.1
SDC1-202ENST00000381150 LCA5Q86VQ0 697 aa14.43□□□□□ -0.1
SDC1-202ENST00000381150 ATP11CQ8NB49 1132 aa14.43□□□□□ -0.1
SDC1-202ENST00000381150 FBXL13Q8NEE6 735 aa14.43□□□□□ -0.1
SDC1-202ENST00000381150 RAB3IL1Q8TBN0 382 aa14.43□□□□□ -0.1
SDC1-202ENST00000381150 GDPD5Q8WTR4 605 aa14.43□□□□□ -0.1
SDC1-202ENST00000381150 SHC3Q92529 594 aa14.43□□□□□ -0.1
SDC1-202ENST00000381150 CLMNQ96JQ2 1002 aa14.43□□□□□ -0.1
SDC1-202ENST00000381150 PPP1R36Q96LQ0 422 aa14.43□□□□□ -0.1
SDC1-202ENST00000381150 CNBD2Q96M20 576 aa14.43□□□□□ -0.1
SDC1-202ENST00000381150 TDRKHQ9Y2W6 561 aaKnown RBP14.43□□□□□ -0.1
SDC1-202ENST00000381150 IVNS1ABPQ9Y6Y0 642 aa14.43□□□□□ -0.1
SDC1-202ENST00000381150 LOC285556D6RIA3 1793 aa14.43□□□□□ -0.1
SDC1-202ENST00000381150 DENND3A2RUS2 1198 aa14.43□□□□□ -0.1
SDC1-202ENST00000381150 F5H423 210 aaPredicted RBP14.43□□□□□ -0.1
SDC1-202ENST00000381150 C6orf222P0C671 652 aaPredicted RBP14.43□□□□□ -0.1
SDC1-202ENST00000381150 TMEM62Q0P6H9 643 aa14.43□□□□□ -0.1
SDC1-202ENST00000381150 FAXCQ5TGI0 409 aa14.43□□□□□ -0.1
SDC1-202ENST00000381150 FAM213AQ9BRX8 229 aa14.43□□□□□ -0.1
SDC1-202ENST00000381150 CTDP1Q9Y5B0 961 aaPredicted RBP14.43□□□□□ -0.1
SDC1-202ENST00000381150 PCDHB4Q9Y5E5 795 aa14.43□□□□□ -0.1
SDC1-202ENST00000381150 LTBP3Q9NS15 1303 aa14.43□□□□□ -0.1
SDC1-202ENST00000381150 AVILO75366 819 aa14.42□□□□□ -0.1
SDC1-202ENST00000381150 GPC3P51654 580 aa14.42□□□□□ -0.1
SDC1-202ENST00000381150 DCAF15Q66K64 600 aa14.42□□□□□ -0.1
SDC1-202ENST00000381150 TXNRD3NBQ6F5E7 133 aa14.42□□□□□ -0.1
SDC1-202ENST00000381150 ABHD15Q6UXT9 468 aa14.42□□□□□ -0.1
SDC1-202ENST00000381150 CATSPERGQ6ZRH7 1159 aa14.42□□□□□ -0.1
SDC1-202ENST00000381150 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.42□□□□□ -0.1
SDC1-202ENST00000381150 PDIK1LQ8N165 341 aa14.42□□□□□ -0.1
SDC1-202ENST00000381150 NSUN6Q8TEA1 469 aaKnown RBP14.42□□□□□ -0.1
SDC1-202ENST00000381150 SERAC1Q96JX3 654 aa14.42□□□□□ -0.1
SDC1-202ENST00000381150 NR1H4Q96RI1 486 aaPredicted RBP14.42□□□□□ -0.1
SDC1-202ENST00000381150 WRNIP1Q96S55 665 aa14.42□□□□□ -0.1
SDC1-202ENST00000381150 C17orf75Q9HAS0 396 aa14.42□□□□□ -0.1
SDC1-202ENST00000381150 IFT122Q9HBG6 1241 aa14.42□□□□□ -0.1
SDC1-202ENST00000381150 F8VP50 259 aa14.42□□□□□ -0.1
SDC1-202ENST00000381150 LIASO43766 372 aa14.42□□□□□ -0.1
SDC1-202ENST00000381150 PROSCO94903 275 aa14.42□□□□□ -0.1
SDC1-202ENST00000381150 KBTBD12Q3ZCT8 623 aa14.42□□□□□ -0.1
SDC1-202ENST00000381150 DENND5BQ6ZUT9 1274 aa14.42□□□□□ -0.1
SDC1-202ENST00000381150 NUDCD3Q8IVD9 361 aa14.42□□□□□ -0.1
SDC1-202ENST00000381150 CCDC60Q8IWA6 550 aaPredicted RBP14.42□□□□□ -0.1
SDC1-202ENST00000381150 GALNT4Q8N4A0 578 aa14.42□□□□□ -0.1
SDC1-202ENST00000381150 EBF4Q9BQW3 602 aa14.42□□□□□ -0.1
SDC1-202ENST00000381150 PCSK1NQ9UHG2 260 aa14.42□□□□□ -0.1
SDC1-202ENST00000381150 EXOC7Q9UPT5 735 aa14.42□□□□□ -0.1
SDC1-202ENST00000381150 NFASCO94856 1347 aa14.42□□□□□ -0.1
SDC1-202ENST00000381150 CAPN8A6NHC0 703 aa14.42□□□□□ -0.1
SDC1-202ENST00000381150 TRIM49D1C9J1S8 452 aa14.42□□□□□ -0.1
SDC1-202ENST00000381150 GRIN3BO60391 1043 aa14.42□□□□□ -0.1
SDC1-202ENST00000381150 TOP3BO95985 862 aaKnown RBP14.42□□□□□ -0.1
SDC1-202ENST00000381150 LMNB2Q03252 620 aa14.42□□□□□ -0.1
SDC1-202ENST00000381150 BST1Q10588 318 aa14.42□□□□□ -0.1
SDC1-202ENST00000381150 DMP1Q13316 513 aaPredicted RBP14.42□□□□□ -0.1
SDC1-202ENST00000381150 PPP6R3Q5H9R7 873 aaPredicted RBP14.42□□□□□ -0.1
SDC1-202ENST00000381150 SWSAP1Q6NVH7 229 aa14.42□□□□□ -0.1
SDC1-202ENST00000381150 DPH6Q7L8W6 267 aa14.42□□□□□ -0.1
SDC1-202ENST00000381150 TMC2Q8TDI7 906 aa14.42□□□□□ -0.1
SDC1-202ENST00000381150 CEP170P1Q96L14 293 aa14.42□□□□□ -0.1
SDC1-202ENST00000381150 MCEEQ96PE7 176 aa14.42□□□□□ -0.1
SDC1-202ENST00000381150 PHACTR1Q9C0D0 580 aa14.42□□□□□ -0.1
SDC1-202ENST00000381150 KLHL4Q9C0H6 718 aa14.42□□□□□ -0.1
SDC1-202ENST00000381150 AS3MTQ9HBK9 375 aa14.42□□□□□ -0.1
SDC1-202ENST00000381150 KMT5AQ9NQR1 393 aa14.42□□□□□ -0.1
SDC1-202ENST00000381150 XPO7Q9UIA9 1087 aaKnown RBP14.42□□□□□ -0.1
SDC1-202ENST00000381150 GJA3Q9Y6H8 435 aa14.42□□□□□ -0.1
SDC1-202ENST00000381150 COMMD3-BMI1R4GMX3 469 aa14.42□□□□□ -0.1
SDC1-202ENST00000381150 TCRBV7S3A2A0A539 114 aa14.41□□□□□ -0.1
SDC1-202ENST00000381150 SPATA31C2B4DYI2 1134 aa14.41□□□□□ -0.1
SDC1-202ENST00000381150 PROCP04070 461 aa14.41□□□□□ -0.1
SDC1-202ENST00000381150 DLDP09622 509 aaKnown RBP14.41□□□□□ -0.1
SDC1-202ENST00000381150 SP2Q02086 613 aa14.41□□□□□ -0.1
SDC1-202ENST00000381150 CYTH1Q15438 398 aa14.41□□□□□ -0.1
SDC1-202ENST00000381150 GSTA3Q16772 222 aa14.41□□□□□ -0.1
SDC1-202ENST00000381150 WDR44Q5JSH3 913 aa14.41□□□□□ -0.1
SDC1-202ENST00000381150 SV2AQ7L0J3 742 aa14.41□□□□□ -0.1
SDC1-202ENST00000381150 FAM71DQ8N9W8 422 aa14.41□□□□□ -0.1
SDC1-202ENST00000381150 ICA1LQ8NDH6 482 aa14.41□□□□□ -0.1
SDC1-202ENST00000381150 DDX1Q92499 740 aaKnown RBP14.41□□□□□ -0.1
SDC1-202ENST00000381150 KLRG1Q96E93 195 aa14.41□□□□□ -0.1
SDC1-202ENST00000381150 MMP19Q99542 508 aa14.41□□□□□ -0.1
SDC1-202ENST00000381150 TLE6Q9H808 572 aa14.41□□□□□ -0.1
SDC1-202ENST00000381150 KCNK13Q9HB14 408 aa14.41□□□□□ -0.1
SDC1-202ENST00000381150 TMEM8AQ9HCN3 771 aa14.41□□□□□ -0.1
SDC1-202ENST00000381150 RABGEF1Q9UJ41 708 aa14.41□□□□□ -0.1
SDC1-202ENST00000381150 SSC5DA1L4H1 1573 aa14.41□□□□□ -0.1
SDC1-202ENST00000381150 A8MXQ7 604 aa14.41□□□□□ -0.1
SDC1-202ENST00000381150 C19orf81C9J6K1 198 aa14.41□□□□□ -0.1
SDC1-202ENST00000381150 MTA2O94776 668 aa14.41□□□□□ -0.1
SDC1-202ENST00000381150 SETSIPP0DME0 302 aa14.41□□□□□ -0.1
SDC1-202ENST00000381150 NELFEP18615 380 aaKnown RBP14.41□□□□□ -0.1
SDC1-202ENST00000381150 KLRC2P26717 231 aa14.41□□□□□ -0.1
SDC1-202ENST00000381150 GDF10P55107 478 aa14.41□□□□□ -0.1
SDC1-202ENST00000381150 PDK3Q15120 406 aa14.41□□□□□ -0.1
SDC1-202ENST00000381150 RNF148Q8N7C7 305 aa14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms