RNA–Protein interactions for RNA: ENST00000375167.1

H2AFX-201, Transcript of H2A histone family member X, humanhuman

TSL 2

Gene H2AFX, Length 1,373 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H2AFX-201ENST00000375167 TRIM4Q9C037 500 aa18.69■□□□□ 0.58
H2AFX-201ENST00000375167 TMLHEQ9NVH6 421 aa18.69■□□□□ 0.58
H2AFX-201ENST00000375167 DEC1Q9P2X7 70 aa18.69■□□□□ 0.58
H2AFX-201ENST00000375167 LACTBL1A8MY62 500 aa18.68■□□□□ 0.58
H2AFX-201ENST00000375167 SCAMP3O14828 347 aaKnown RBP18.68■□□□□ 0.58
H2AFX-201ENST00000375167 CDKL5O76039 1030 aa18.68■□□□□ 0.58
H2AFX-201ENST00000375167 ME3Q16798 604 aa18.68■□□□□ 0.58
H2AFX-201ENST00000375167 WSCD1Q658N2 575 aa18.68■□□□□ 0.58
H2AFX-201ENST00000375167 ERICH1Q86X53 443 aa18.68■□□□□ 0.58
H2AFX-201ENST00000375167 TERB1Q8NA31 727 aa18.68■□□□□ 0.58
H2AFX-201ENST00000375167 ZNF248Q8NDW4 579 aa18.68■□□□□ 0.58
H2AFX-201ENST00000375167 LEO1Q8WVC0 666 aaPredicted RBP18.68■□□□□ 0.58
H2AFX-201ENST00000375167 SLC6A17Q9H1V8 727 aa18.68■□□□□ 0.58
H2AFX-201ENST00000375167 CPNE5Q9HCH3 593 aa18.68■□□□□ 0.58
H2AFX-201ENST00000375167 CD248Q9HCU0 757 aa18.68■□□□□ 0.58
H2AFX-201ENST00000375167 PCDHGA12O60330 932 aa18.68■□□□□ 0.58
H2AFX-201ENST00000375167 RFPL3O75679 317 aa18.68■□□□□ 0.58
H2AFX-201ENST00000375167 CYP2F1P24903 491 aa18.68■□□□□ 0.58
H2AFX-201ENST00000375167 AFF3P51826 1226 aaKnown RBP18.68■□□□□ 0.58
H2AFX-201ENST00000375167 GAD2Q05329 585 aa18.68■□□□□ 0.58
H2AFX-201ENST00000375167 KYAT1Q16773 422 aa18.68■□□□□ 0.58
H2AFX-201ENST00000375167 LY6G5CQ5SRR4 150 aa18.68■□□□□ 0.58
H2AFX-201ENST00000375167 HES3Q5TGS1 186 aa18.68■□□□□ 0.58
H2AFX-201ENST00000375167 EGFLAMQ63HQ2 1017 aa18.68■□□□□ 0.58
H2AFX-201ENST00000375167 ZPBP2Q6X784 338 aa18.68■□□□□ 0.58
H2AFX-201ENST00000375167 MIB1Q86YT6 1006 aa18.68■□□□□ 0.58
H2AFX-201ENST00000375167 TTC9Q92623 222 aa18.68■□□□□ 0.58
H2AFX-201ENST00000375167 BACH2Q9BYV9 841 aa18.68■□□□□ 0.58
H2AFX-201ENST00000375167 FAM117AQ9C073 453 aa18.68■□□□□ 0.58
H2AFX-201ENST00000375167 WSB2Q9NYS7 404 aaPredicted RBP18.68■□□□□ 0.58
H2AFX-201ENST00000375167 EIF2B4Q9UI10 523 aaKnown RBP18.68■□□□□ 0.58
H2AFX-201ENST00000375167 CPQQ9Y646 472 aa18.68■□□□□ 0.58
H2AFX-201ENST00000375167 PIRO00625 290 aa18.67■□□□□ 0.58
H2AFX-201ENST00000375167 SLC16A4O15374 487 aa18.67■□□□□ 0.58
H2AFX-201ENST00000375167 TULP3O75386 442 aa18.67■□□□□ 0.58
H2AFX-201ENST00000375167 C1SP09871 688 aa18.67■□□□□ 0.58
H2AFX-201ENST00000375167 TAF6P49848 677 aa18.67■□□□□ 0.58
H2AFX-201ENST00000375167 SLC7A9P82251 487 aa18.67■□□□□ 0.58
H2AFX-201ENST00000375167 RABEP1Q15276 862 aa18.67■□□□□ 0.58
H2AFX-201ENST00000375167 KIF19Q2TAC6 998 aa18.67■□□□□ 0.58
H2AFX-201ENST00000375167 USP49Q70CQ1 688 aa18.67■□□□□ 0.58
H2AFX-201ENST00000375167 ETFBKMTQ8IXQ9 262 aa18.67■□□□□ 0.58
H2AFX-201ENST00000375167 NAT16Q8N8M0 369 aa18.67■□□□□ 0.58
H2AFX-201ENST00000375167 SPIRE2Q8WWL2 714 aa18.67■□□□□ 0.58
H2AFX-201ENST00000375167 GABRG3Q99928 467 aa18.67■□□□□ 0.58
H2AFX-201ENST00000375167 BRMS1Q9HCU9 246 aa18.67■□□□□ 0.58
H2AFX-201ENST00000375167 SMPD4Q9NXE4 827 aa18.67■□□□□ 0.58
H2AFX-201ENST00000375167 CFAP97Q9P2B7 532 aa18.67■□□□□ 0.58
H2AFX-201ENST00000375167 TBC1D14Q9P2M4 693 aa18.67■□□□□ 0.58
H2AFX-201ENST00000375167 ANKMY1Q9P2S6 941 aa18.67■□□□□ 0.58
H2AFX-201ENST00000375167 LIMCH1Q9UPQ0 1083 aa18.67■□□□□ 0.58
H2AFX-201ENST00000375167 STARD13Q9Y3M8 1113 aa18.67■□□□□ 0.58
H2AFX-201ENST00000375167 PCDHB6Q9Y5E3 794 aa18.67■□□□□ 0.58
H2AFX-201ENST00000375167 E2F8A0AVK6 867 aa18.66■□□□□ 0.58
H2AFX-201ENST00000375167 METTL12A8MUP2 240 aa18.66■□□□□ 0.58
H2AFX-201ENST00000375167 ENC1O14682 589 aa18.66■□□□□ 0.58
H2AFX-201ENST00000375167 HIP1RO75146 1068 aa18.66■□□□□ 0.58
H2AFX-201ENST00000375167 MUTP22033 750 aa18.66■□□□□ 0.58
H2AFX-201ENST00000375167 CSNK1EP49674 416 aaKnown RBP18.66■□□□□ 0.58
H2AFX-201ENST00000375167 NR5A1Q13285 461 aa18.66■□□□□ 0.58
H2AFX-201ENST00000375167 TEAD4Q15561 434 aa18.66■□□□□ 0.58
H2AFX-201ENST00000375167 ENOX2Q16206 610 aaKnown RBP18.66■□□□□ 0.58
H2AFX-201ENST00000375167 HAUS3Q68CZ6 603 aa18.66■□□□□ 0.58
H2AFX-201ENST00000375167 DDX42Q86XP3 938 aaKnown RBP eCLIP18.66■□□□□ 0.58
H2AFX-201ENST00000375167 NECAB1Q8N987 351 aa18.66■□□□□ 0.58
H2AFX-201ENST00000375167 GTF3C6Q969F1 213 aa18.66■□□□□ 0.58
H2AFX-201ENST00000375167 IGSF8Q969P0 613 aa18.66■□□□□ 0.58
H2AFX-201ENST00000375167 FAM212AQ96EL1 285 aa18.66■□□□□ 0.58
H2AFX-201ENST00000375167 NAF1Q96HR8 494 aaKnown RBP18.66■□□□□ 0.58
H2AFX-201ENST00000375167 ACOX2Q99424 681 aa18.66■□□□□ 0.58
H2AFX-201ENST00000375167 GJB4Q9NTQ9 266 aa18.66■□□□□ 0.58
H2AFX-201ENST00000375167 TRPM5Q9NZQ8 1165 aa18.66■□□□□ 0.58
H2AFX-201ENST00000375167 HCN2Q9UL51 889 aa18.66■□□□□ 0.58
H2AFX-201ENST00000375167 SNX11Q9Y5W9 270 aa18.66■□□□□ 0.58
H2AFX-201ENST00000375167 RAD54BQ9Y620 910 aa18.66■□□□□ 0.58
H2AFX-201ENST00000375167 ANO9A1A5B4 782 aa18.65■□□□□ 0.58
H2AFX-201ENST00000375167 GP1BBP13224 206 aa18.65■□□□□ 0.58
H2AFX-201ENST00000375167 KRT2P35908 639 aa18.65■□□□□ 0.58
H2AFX-201ENST00000375167 PCBP4P57723 403 aaKnown RBP18.65■□□□□ 0.58
H2AFX-201ENST00000375167 JADE1Q6IE81 842 aa18.65■□□□□ 0.58
H2AFX-201ENST00000375167 ZNF574Q6ZN55 896 aaPredicted RBP18.65■□□□□ 0.58
H2AFX-201ENST00000375167 METTL3Q86U44 580 aaKnown RBP18.65■□□□□ 0.58
H2AFX-201ENST00000375167 DAW1Q8N136 415 aa18.65■□□□□ 0.58
H2AFX-201ENST00000375167 ZFRQ96KR1 1074 aaKnown RBP18.65■□□□□ 0.58
H2AFX-201ENST00000375167 CCSER1Q9C0I3 900 aa18.65■□□□□ 0.58
H2AFX-201ENST00000375167 C17orf75Q9HAS0 396 aa18.65■□□□□ 0.58
H2AFX-201ENST00000375167 AHCTF1Q8WYP5 2266 aa18.64■□□□□ 0.57
H2AFX-201ENST00000375167 HOXC11O43248 304 aaPredicted RBP18.64■□□□□ 0.57
H2AFX-201ENST00000375167 CTDNEP1O95476 244 aa18.64■□□□□ 0.57
H2AFX-201ENST00000375167 TMEM132DQ14C87 1099 aa18.64■□□□□ 0.57
H2AFX-201ENST00000375167 SCN4BQ8IWT1 228 aa18.64■□□□□ 0.57
H2AFX-201ENST00000375167 CD302Q8IX05 232 aa18.64■□□□□ 0.57
H2AFX-201ENST00000375167 SNX19Q92543 992 aa18.64■□□□□ 0.57
H2AFX-201ENST00000375167 OTUB2Q96DC9 234 aa18.64■□□□□ 0.57
H2AFX-201ENST00000375167 BICD1Q96G01 975 aa18.64■□□□□ 0.57
H2AFX-201ENST00000375167 USP36Q9P275 1121 aaKnown RBP18.64■□□□□ 0.57
H2AFX-201ENST00000375167 OXTRP30559 389 aa18.63■□□□□ 0.57
H2AFX-201ENST00000375167 PDIA5Q14554 519 aa18.63■□□□□ 0.57
H2AFX-201ENST00000375167 GRAMD4Q6IC98 578 aa18.63■□□□□ 0.57
H2AFX-201ENST00000375167 C1orf216Q8TAB5 229 aa18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms