RNA–Protein interactions for RNA: ENST00000368533.7

TPM3-212, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 3,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-212ENST00000368533 ZWILCHQ9H900 591 aa11.16□□□□□ -0.62
TPM3-212ENST00000368533 ZDHHC18Q9NUE0 388 aa11.16□□□□□ -0.62
TPM3-212ENST00000368533 HCSTQ9UBK5 93 aa11.16□□□□□ -0.62
TPM3-212ENST00000368533 ATP8B3O60423 1300 aa11.16□□□□□ -0.62
TPM3-212ENST00000368533 HOXC8P31273 242 aa11.15□□□□□ -0.62
TPM3-212ENST00000368533 RFC1P35251 1148 aaPredicted RBP11.15□□□□□ -0.62
TPM3-212ENST00000368533 PAPOLAP51003 745 aaKnown RBP11.15□□□□□ -0.62
TPM3-212ENST00000368533 PTP4A2Q12974 167 aa11.15□□□□□ -0.62
TPM3-212ENST00000368533 LAMB3Q13751 1172 aa11.15□□□□□ -0.62
TPM3-212ENST00000368533 WSCD1Q658N2 575 aa11.15□□□□□ -0.62
TPM3-212ENST00000368533 ZDHHC24Q6UX98 284 aa11.15□□□□□ -0.62
TPM3-212ENST00000368533 TRIM74Q86UV6 250 aa11.15□□□□□ -0.62
TPM3-212ENST00000368533 TRIM73Q86UV7 250 aa11.15□□□□□ -0.62
TPM3-212ENST00000368533 GSTCDQ8NEC7 633 aa11.15□□□□□ -0.62
TPM3-212ENST00000368533 NT5C1AQ9BXI3 368 aa11.15□□□□□ -0.62
TPM3-212ENST00000368533 RNF208Q9H0X6 261 aa11.15□□□□□ -0.62
TPM3-212ENST00000368533 LMCD1Q9NZU5 365 aa11.15□□□□□ -0.62
TPM3-212ENST00000368533 CNTN3Q9P232 1028 aa11.15□□□□□ -0.62
TPM3-212ENST00000368533 BARX2Q9UMQ3 279 aaPredicted RBP11.15□□□□□ -0.62
TPM3-212ENST00000368533 UBQLN1Q9UMX0 589 aaKnown RBP11.15□□□□□ -0.62
TPM3-212ENST00000368533 TRIM33Q9UPN9 1127 aa11.15□□□□□ -0.62
TPM3-212ENST00000368533 CCT8L1PA6NM43 557 aa11.15□□□□□ -0.62
TPM3-212ENST00000368533 E5RJQ4 531 aa11.15□□□□□ -0.62
TPM3-212ENST00000368533 RASGRF2O14827 1237 aa11.15□□□□□ -0.62
TPM3-212ENST00000368533 P4HA1P13674 534 aa11.15□□□□□ -0.62
TPM3-212ENST00000368533 MMP8P22894 467 aa11.15□□□□□ -0.62
TPM3-212ENST00000368533 PTGIRP43119 386 aa11.15□□□□□ -0.62
TPM3-212ENST00000368533 BRCC3P46736 316 aa11.15□□□□□ -0.62
TPM3-212ENST00000368533 PEX5P50542 639 aa11.15□□□□□ -0.62
TPM3-212ENST00000368533 MBTPS1Q14703 1052 aa11.15□□□□□ -0.62
TPM3-212ENST00000368533 MAP3K21Q5TCX8 1036 aa11.15□□□□□ -0.62
TPM3-212ENST00000368533 OR6B2Q6IFH4 312 aa11.15□□□□□ -0.62
TPM3-212ENST00000368533 ALKAL1Q6UXT8 129 aa11.15□□□□□ -0.62
TPM3-212ENST00000368533 ANKS1BQ7Z6G8 1248 aa11.15□□□□□ -0.62
TPM3-212ENST00000368533 PRUNE1Q86TP1 453 aa11.15□□□□□ -0.62
TPM3-212ENST00000368533 SCUBE3Q8IX30 993 aa11.15□□□□□ -0.62
TPM3-212ENST00000368533 NME8Q8N427 588 aa11.15□□□□□ -0.62
TPM3-212ENST00000368533 SEC14L1Q92503 715 aa11.15□□□□□ -0.62
TPM3-212ENST00000368533 SCLYQ96I15 445 aa11.15□□□□□ -0.62
TPM3-212ENST00000368533 TSC22D3Q99576 134 aa11.15□□□□□ -0.62
TPM3-212ENST00000368533 RHOBTB2Q9BYZ6 727 aa11.15□□□□□ -0.62
TPM3-212ENST00000368533 PPP1R12CQ9BZL4 782 aa11.15□□□□□ -0.62
TPM3-212ENST00000368533 ABCF3Q9NUQ8 709 aa11.15□□□□□ -0.62
TPM3-212ENST00000368533 NOP53Q9NZM5 478 aaKnown RBP11.15□□□□□ -0.62
TPM3-212ENST00000368533 CNTN6Q9UQ52 1028 aa11.15□□□□□ -0.62
TPM3-212ENST00000368533 SYNJ2BP-COX16A0A087WUM0 186 aa11.15□□□□□ -0.63
TPM3-212ENST00000368533 KPNA6O60684 536 aa11.15□□□□□ -0.63
TPM3-212ENST00000368533 DNAJC8O75937 253 aaPredicted RBP11.15□□□□□ -0.63
TPM3-212ENST00000368533 ITGB1P05556 798 aa11.15□□□□□ -0.63
TPM3-212ENST00000368533 CKBP12277 381 aa11.15□□□□□ -0.63
TPM3-212ENST00000368533 KRT10P13645 584 aa11.15□□□□□ -0.63
TPM3-212ENST00000368533 LCP1P13796 627 aa11.15□□□□□ -0.63
TPM3-212ENST00000368533 PBX3P40426 434 aa11.15□□□□□ -0.63
TPM3-212ENST00000368533 CCL23P55773 120 aa11.15□□□□□ -0.63
TPM3-212ENST00000368533 LILRA4P59901 499 aa11.15□□□□□ -0.63
TPM3-212ENST00000368533 ATP11AP98196 1134 aa11.15□□□□□ -0.63
TPM3-212ENST00000368533 CDC42EP1Q00587 391 aa11.15□□□□□ -0.63
TPM3-212ENST00000368533 ZBTB6Q15916 424 aa11.15□□□□□ -0.63
TPM3-212ENST00000368533 FAM102AQ5T9C2 384 aaPredicted RBP11.15□□□□□ -0.63
TPM3-212ENST00000368533 ZNF677Q86XU0 584 aa11.15□□□□□ -0.63
TPM3-212ENST00000368533 FAM81BQ96LP2 452 aa11.15□□□□□ -0.63
TPM3-212ENST00000368533 EPAS1Q99814 870 aa11.15□□□□□ -0.63
TPM3-212ENST00000368533 ELAC2Q9BQ52 826 aaKnown RBP11.15□□□□□ -0.63
TPM3-212ENST00000368533 BEGAINQ9BUH8 593 aa11.15□□□□□ -0.63
TPM3-212ENST00000368533 INTS9Q9NV88 658 aaKnown RBP11.15□□□□□ -0.63
TPM3-212ENST00000368533 GRHL1Q9NZI5 618 aa11.15□□□□□ -0.63
TPM3-212ENST00000368533 COX16Q9P0S2 106 aa11.15□□□□□ -0.63
TPM3-212ENST00000368533 ATF7P17544 494 aaPredicted RBP11.14□□□□□ -0.63
TPM3-212ENST00000368533 DRD4P21917 467 aa11.14□□□□□ -0.63
TPM3-212ENST00000368533 GATMP50440 423 aa11.14□□□□□ -0.63
TPM3-212ENST00000368533 DYNLT1P63172 113 aa11.14□□□□□ -0.63
TPM3-212ENST00000368533 KRT17Q04695 432 aa11.14□□□□□ -0.63
TPM3-212ENST00000368533 ENPEPQ07075 957 aa11.14□□□□□ -0.63
TPM3-212ENST00000368533 ADCY1Q08828 1119 aa11.14□□□□□ -0.63
TPM3-212ENST00000368533 ZNF252P-AS1Q0IIN9 211 aa11.14□□□□□ -0.63
TPM3-212ENST00000368533 PMF1Q6P1K2 205 aa11.14□□□□□ -0.63
TPM3-212ENST00000368533 APBB1IPQ7Z5R6 666 aaPredicted RBP11.14□□□□□ -0.63
TPM3-212ENST00000368533 OSTM1Q86WC4 334 aa11.14□□□□□ -0.63
TPM3-212ENST00000368533 TTC30AQ86WT1 665 aa11.14□□□□□ -0.63
TPM3-212ENST00000368533 TAB3Q8N5C8 712 aaPredicted RBP11.14□□□□□ -0.63
TPM3-212ENST00000368533 STKLD1Q8NE28 680 aa11.14□□□□□ -0.63
TPM3-212ENST00000368533 B4GALNT2Q8NHY0 566 aa11.14□□□□□ -0.63
TPM3-212ENST00000368533 EZH1Q92800 747 aaPredicted RBP11.14□□□□□ -0.63
TPM3-212ENST00000368533 XPO6Q96QU8 1125 aaKnown RBP11.14□□□□□ -0.63
TPM3-212ENST00000368533 MLXIPLQ9NP71 852 aa11.14□□□□□ -0.63
TPM3-212ENST00000368533 KCNK9Q9NPC2 374 aa11.14□□□□□ -0.63
TPM3-212ENST00000368533 CYB561D2O14569 222 aa11.14□□□□□ -0.63
TPM3-212ENST00000368533 B3GAT3O94766 335 aa11.14□□□□□ -0.63
TPM3-212ENST00000368533 PYGBP11216 843 aa11.14□□□□□ -0.63
TPM3-212ENST00000368533 GNL1P36915 607 aaPredicted RBP11.14□□□□□ -0.63
TPM3-212ENST00000368533 ADCY8P40145 1251 aa11.14□□□□□ -0.63
TPM3-212ENST00000368533 IFRD2Q12894 506 aaPredicted RBP11.14□□□□□ -0.63
TPM3-212ENST00000368533 LONRF1Q17RB8 773 aa11.14□□□□□ -0.63
TPM3-212ENST00000368533 C15orf59Q2T9L4 293 aaPredicted RBP11.14□□□□□ -0.63
TPM3-212ENST00000368533 LACTB2Q53H82 288 aaPredicted RBP11.14□□□□□ -0.63
TPM3-212ENST00000368533 EMC10Q5UCC4 262 aa11.14□□□□□ -0.63
TPM3-212ENST00000368533 FEZF2Q8TBJ5 459 aa11.14□□□□□ -0.63
TPM3-212ENST00000368533 SLC2A14Q8TDB8 520 aa11.14□□□□□ -0.63
TPM3-212ENST00000368533 KBTBD7Q8WVZ9 684 aa11.14□□□□□ -0.63
TPM3-212ENST00000368533 LBHD1Q9BQE6 289 aaPredicted RBP11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms