RNA–Protein interactions for RNA: ENST00000368292.10

ECHDC1-204, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 854 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-204ENST00000368292 AIFM3Q96NN9 605 aa5.56□□□□□ -1.52
ECHDC1-204ENST00000368292 EXOC1Q9NV70 894 aa5.56□□□□□ -1.52
ECHDC1-204ENST00000368292 TMOD4Q9NZQ9 345 aa5.56□□□□□ -1.52
ECHDC1-204ENST00000368292 TUBD1Q9UJT1 453 aa5.56□□□□□ -1.52
ECHDC1-204ENST00000368292 PAXBP1Q9Y5B6 917 aa5.56□□□□□ -1.52
ECHDC1-204ENST00000368292 N6AMT1Q9Y5N5 214 aa5.56□□□□□ -1.52
ECHDC1-204ENST00000368292 LRRFIP2Q9Y608 721 aaKnown RBP5.56□□□□□ -1.52
ECHDC1-204ENST00000368292 DCHS1Q96JQ0 3298 aa5.56□□□□□ -1.52
ECHDC1-204ENST00000368292 USP34Q70CQ2 3546 aa5.56□□□□□ -1.52
ECHDC1-204ENST00000368292 COL4A1P02462 1669 aa5.56□□□□□ -1.52
ECHDC1-204ENST00000368292 ROCK2O75116 1388 aaKnown RBP5.55□□□□□ -1.52
ECHDC1-204ENST00000368292 HEG1Q9ULI3 1381 aa5.55□□□□□ -1.52
ECHDC1-204ENST00000368292 NUP98P52948 1817 aa5.55□□□□□ -1.52
ECHDC1-204ENST00000368292 LTBP2Q14767 1821 aa5.55□□□□□ -1.52
ECHDC1-204ENST00000368292 KIF16BQ96L93 1317 aa5.55□□□□□ -1.52
ECHDC1-204ENST00000368292 PMM2O15305 246 aa5.55□□□□□ -1.52
ECHDC1-204ENST00000368292 CUTAO60888 179 aa5.55□□□□□ -1.52
ECHDC1-204ENST00000368292 MAFO75444 373 aaPredicted RBP5.55□□□□□ -1.52
ECHDC1-204ENST00000368292 APOL3O95236 402 aa5.55□□□□□ -1.52
ECHDC1-204ENST00000368292 PFKMP08237 780 aa5.55□□□□□ -1.52
ECHDC1-204ENST00000368292 ZNF888P0CJ79 500 aaPredicted RBP5.55□□□□□ -1.52
ECHDC1-204ENST00000368292 HSD3B1P14060 373 aa5.55□□□□□ -1.52
ECHDC1-204ENST00000368292 ATP6V1B1P15313 513 aa5.55□□□□□ -1.52
ECHDC1-204ENST00000368292 ETV4P43268 484 aa5.55□□□□□ -1.52
ECHDC1-204ENST00000368292 RCAN1P53805 252 aa5.55□□□□□ -1.52
ECHDC1-204ENST00000368292 MRPS9P82933 396 aaKnown RBP5.55□□□□□ -1.52
ECHDC1-204ENST00000368292 MPP1Q00013 466 aa5.55□□□□□ -1.52
ECHDC1-204ENST00000368292 ADCY2Q08462 1091 aa5.55□□□□□ -1.52
ECHDC1-204ENST00000368292 TRIM14Q14142 442 aa5.55□□□□□ -1.52
ECHDC1-204ENST00000368292 TRIM25Q14258 630 aaKnown RBP5.55□□□□□ -1.52
ECHDC1-204ENST00000368292 EIF4HQ15056 248 aaKnown RBP5.55□□□□□ -1.52
ECHDC1-204ENST00000368292 PDCD2Q16342 344 aaPredicted RBP5.55□□□□□ -1.52
ECHDC1-204ENST00000368292 HLFQ16534 295 aa5.55□□□□□ -1.52
ECHDC1-204ENST00000368292 MINDY4Q4G0A6 757 aa5.55□□□□□ -1.52
ECHDC1-204ENST00000368292 C1orf141Q5JVX7 400 aa5.55□□□□□ -1.52
ECHDC1-204ENST00000368292 TMEM31Q5JXX7 168 aa5.55□□□□□ -1.52
ECHDC1-204ENST00000368292 UBXN11Q5T124 520 aa5.55□□□□□ -1.52
ECHDC1-204ENST00000368292 HECTD3Q5T447 861 aa5.55□□□□□ -1.52
ECHDC1-204ENST00000368292 PRAMEF9Q5VWM5 478 aa5.55□□□□□ -1.52
ECHDC1-204ENST00000368292 TMEM200BQ69YZ2 307 aa5.55□□□□□ -1.52
ECHDC1-204ENST00000368292 KIAA1841Q6NSI8 718 aa5.55□□□□□ -1.52
ECHDC1-204ENST00000368292 BORAQ6PGQ7 559 aa5.55□□□□□ -1.52
ECHDC1-204ENST00000368292 B3GNT9Q6UX72 402 aa5.55□□□□□ -1.52
ECHDC1-204ENST00000368292 USP51Q70EK9 711 aa5.55□□□□□ -1.52
ECHDC1-204ENST00000368292 BEND5Q7L4P6 421 aa5.55□□□□□ -1.52
ECHDC1-204ENST00000368292 GPR155Q7Z3F1 870 aa5.55□□□□□ -1.52
ECHDC1-204ENST00000368292 NLRP14Q86W24 1093 aa5.55□□□□□ -1.52
ECHDC1-204ENST00000368292 REXO1L1PQ8IX06 675 aa5.55□□□□□ -1.52
ECHDC1-204ENST00000368292 MYOCDQ8IZQ8 938 aa5.55□□□□□ -1.52
ECHDC1-204ENST00000368292 TRIML1Q8N9V2 468 aa5.55□□□□□ -1.52
ECHDC1-204ENST00000368292 SUPT20HQ8NEM7 779 aa5.55□□□□□ -1.52
ECHDC1-204ENST00000368292 BICD2Q8TD16 824 aa5.55□□□□□ -1.52
ECHDC1-204ENST00000368292 CALML6Q8TD86 181 aa5.55□□□□□ -1.52
ECHDC1-204ENST00000368292 ANKRD49Q8WVL7 239 aa5.55□□□□□ -1.52
ECHDC1-204ENST00000368292 SSH1Q8WYL5 1049 aa5.55□□□□□ -1.52
ECHDC1-204ENST00000368292 ZNF75CPQ92670 426 aaPredicted RBP5.55□□□□□ -1.52
ECHDC1-204ENST00000368292 ARHGEF2Q92974 986 aaKnown RBP5.55□□□□□ -1.52
ECHDC1-204ENST00000368292 TTC17Q96AE7 1141 aa5.55□□□□□ -1.52
ECHDC1-204ENST00000368292 FAM81BQ96LP2 452 aa5.55□□□□□ -1.52
ECHDC1-204ENST00000368292 LRGUKQ96M69 825 aa5.55□□□□□ -1.52
ECHDC1-204ENST00000368292 NEK1Q96PY6 1258 aa5.55□□□□□ -1.52
ECHDC1-204ENST00000368292 TCHPQ9BT92 498 aa5.55□□□□□ -1.52
ECHDC1-204ENST00000368292 GTPBP4Q9BZE4 634 aaKnown RBP5.55□□□□□ -1.52
ECHDC1-204ENST00000368292 IQCGQ9H095 443 aaKnown RBP5.55□□□□□ -1.52
ECHDC1-204ENST00000368292 WNT8AQ9H1J5 351 aa5.55□□□□□ -1.52
ECHDC1-204ENST00000368292 KCTD10Q9H3F6 313 aa5.55□□□□□ -1.52
ECHDC1-204ENST00000368292 RRN3Q9NYV6 651 aa5.55□□□□□ -1.52
ECHDC1-204ENST00000368292 RCAN3Q9UKA8 241 aa5.55□□□□□ -1.52
ECHDC1-204ENST00000368292 NUMBLQ9Y6R0 609 aa5.55□□□□□ -1.52
ECHDC1-204ENST00000368292 XIRP2A4UGR9 3374 aa5.55□□□□□ -1.52
ECHDC1-204ENST00000368292 C5orf42Q9H799 3197 aa5.55□□□□□ -1.52
ECHDC1-204ENST00000368292 KMT2BQ9UMN6 2715 aaPredicted RBP5.54□□□□□ -1.52
ECHDC1-204ENST00000368292 ABCC4O15439 1325 aa5.54□□□□□ -1.52
ECHDC1-204ENST00000368292 A0A0B4J203 849 aa5.54□□□□□ -1.52
ECHDC1-204ENST00000368292 CCDC196A0A1B0GTZ2 297 aa5.54□□□□□ -1.52
ECHDC1-204ENST00000368292 INO80B-WBP1J3KQ70 363 aa5.54□□□□□ -1.52
ECHDC1-204ENST00000368292 B4GALT4O60513 344 aa5.54□□□□□ -1.52
ECHDC1-204ENST00000368292 FOXD2O60548 495 aaPredicted RBP5.54□□□□□ -1.52
ECHDC1-204ENST00000368292 NDUFS2O75306 463 aa5.54□□□□□ -1.52
ECHDC1-204ENST00000368292 MTRF1O75570 445 aaKnown RBP5.54□□□□□ -1.52
ECHDC1-204ENST00000368292 CD4P01730 458 aa5.54□□□□□ -1.52
ECHDC1-204ENST00000368292 SLC4A1P02730 911 aa5.54□□□□□ -1.52
ECHDC1-204ENST00000368292 SFTPCP11686 197 aa5.54□□□□□ -1.52
ECHDC1-204ENST00000368292 RPS2P15880 293 aaKnown RBP5.54□□□□□ -1.52
ECHDC1-204ENST00000368292 BTF3P20290 206 aaKnown RBP5.54□□□□□ -1.52
ECHDC1-204ENST00000368292 MUTP22033 750 aa5.54□□□□□ -1.52
ECHDC1-204ENST00000368292 APEX1P27695 318 aaKnown RBP5.54□□□□□ -1.52
ECHDC1-204ENST00000368292 AK2P54819 239 aa5.54□□□□□ -1.52
ECHDC1-204ENST00000368292 ADKP55263 362 aaKnown RBP5.54□□□□□ -1.52
ECHDC1-204ENST00000368292 AKAP17AQ02040 695 aaKnown RBP5.54□□□□□ -1.52
ECHDC1-204ENST00000368292 ROM1Q03395 351 aa5.54□□□□□ -1.52
ECHDC1-204ENST00000368292 LRRC74AQ0VAA2 488 aa5.54□□□□□ -1.52
ECHDC1-204ENST00000368292 GBX1Q14549 363 aa5.54□□□□□ -1.52
ECHDC1-204ENST00000368292 GRM3Q14832 879 aa5.54□□□□□ -1.52
ECHDC1-204ENST00000368292 NOLC1Q14978 699 aaKnown RBP eCLIP5.54□□□□□ -1.52
ECHDC1-204ENST00000368292 CCNG2Q16589 344 aa5.54□□□□□ -1.52
ECHDC1-204ENST00000368292 TRIM68Q6AZZ1 485 aa5.54□□□□□ -1.52
ECHDC1-204ENST00000368292 ITPRIPL1Q6GPH6 555 aa5.54□□□□□ -1.52
ECHDC1-204ENST00000368292 SLFN12LQ6IEE8 588 aa5.54□□□□□ -1.52
ECHDC1-204ENST00000368292 RETSATQ6NUM9 610 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms