RNA–Protein interactions for RNA: ENST00000368226.8

PTPRK-207, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTPRK, Length 6,087 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-207ENST00000368226 TFDP3Q5H9I0 405 aa13.35□□□□□ -0.27
PTPRK-207ENST00000368226 TTI2Q6NXR4 508 aa13.35□□□□□ -0.27
PTPRK-207ENST00000368226 SV2AQ7L0J3 742 aa13.35□□□□□ -0.27
PTPRK-207ENST00000368226 C16orf59Q7L2K0 433 aa13.35□□□□□ -0.27
PTPRK-207ENST00000368226 ATP8B4Q8TF62 1192 aa13.35□□□□□ -0.27
PTPRK-207ENST00000368226 hCG_2014768A0A024R1R8 64 aa13.35□□□□□ -0.27
PTPRK-207ENST00000368226 PTPN11Q06124 597 aaPredicted RBP13.35□□□□□ -0.27
PTPRK-207ENST00000368226 CDC16Q13042 620 aa13.35□□□□□ -0.27
PTPRK-207ENST00000368226 LAMB3Q13751 1172 aa13.35□□□□□ -0.27
PTPRK-207ENST00000368226 ISCUQ9H1K1 167 aa13.35□□□□□ -0.27
PTPRK-207ENST00000368226 TSPAN16Q9UKR8 245 aa13.35□□□□□ -0.27
PTPRK-207ENST00000368226 MUTP22033 750 aa13.34□□□□□ -0.27
PTPRK-207ENST00000368226 GARTP22102 1010 aa13.34□□□□□ -0.27
PTPRK-207ENST00000368226 KCNK10P57789 538 aa13.34□□□□□ -0.27
PTPRK-207ENST00000368226 OVOS1Q6IE37 1185 aa13.34□□□□□ -0.27
PTPRK-207ENST00000368226 REPS2Q8NFH8 660 aa13.34□□□□□ -0.27
PTPRK-207ENST00000368226 GRID1Q9ULK0 1009 aa13.34□□□□□ -0.27
PTPRK-207ENST00000368226 USP15Q9Y4E8 981 aaPredicted RBP13.34□□□□□ -0.27
PTPRK-207ENST00000368226 PCDHB12Q9Y5F1 795 aa13.34□□□□□ -0.27
PTPRK-207ENST00000368226 PCDH8O95206 1070 aa13.34□□□□□ -0.27
PTPRK-207ENST00000368226 SERPINB5P36952 375 aa13.34□□□□□ -0.27
PTPRK-207ENST00000368226 HSD17B3P37058 310 aa13.34□□□□□ -0.27
PTPRK-207ENST00000368226 BTG3Q14201 252 aaPredicted RBP13.34□□□□□ -0.27
PTPRK-207ENST00000368226 DACT2Q5SW24 774 aa13.34□□□□□ -0.27
PTPRK-207ENST00000368226 AP1ARQ63HQ0 302 aa13.34□□□□□ -0.27
PTPRK-207ENST00000368226 LRIG3Q6UXM1 1119 aa13.34□□□□□ -0.27
PTPRK-207ENST00000368226 LINC00523Q86TU6 105 aa13.34□□□□□ -0.27
PTPRK-207ENST00000368226 KIAA0895Q8NCT3 520 aa13.34□□□□□ -0.27
PTPRK-207ENST00000368226 TSC22D3Q99576 134 aa13.34□□□□□ -0.27
PTPRK-207ENST00000368226 SYT15Q9BQS2 421 aa13.34□□□□□ -0.27
PTPRK-207ENST00000368226 SENP6Q9GZR1 1112 aaPredicted RBP13.34□□□□□ -0.27
PTPRK-207ENST00000368226 CAPN15O75808 1086 aa13.34□□□□□ -0.27
PTPRK-207ENST00000368226 SLITRK3O94933 977 aa13.34□□□□□ -0.27
PTPRK-207ENST00000368226 ERVK-9P63128 1117 aa13.34□□□□□ -0.27
PTPRK-207ENST00000368226 PPATQ06203 517 aa13.34□□□□□ -0.27
PTPRK-207ENST00000368226 PTF1AQ7RTS3 328 aa13.34□□□□□ -0.27
PTPRK-207ENST00000368226 DNERQ8NFT8 737 aa13.34□□□□□ -0.27
PTPRK-207ENST00000368226 OR9Q1Q8NGQ5 310 aa13.34□□□□□ -0.27
PTPRK-207ENST00000368226 KIAA1683Q9H0B3 1180 aa13.34□□□□□ -0.27
PTPRK-207ENST00000368226 NSMCE4AQ9NXX6 385 aa13.34□□□□□ -0.27
PTPRK-207ENST00000368226 DTNAQ9Y4J8 743 aa13.34□□□□□ -0.27
PTPRK-207ENST00000368226 PREX1Q8TCU6 1659 aa13.34□□□□□ -0.27
PTPRK-207ENST00000368226 LACTBL1A8MY62 500 aa13.34□□□□□ -0.27
PTPRK-207ENST00000368226 EML1O00423 815 aa13.34□□□□□ -0.27
PTPRK-207ENST00000368226 ACVR2BQ13705 512 aa13.34□□□□□ -0.27
PTPRK-207ENST00000368226 CNGA3Q16281 694 aa13.34□□□□□ -0.27
PTPRK-207ENST00000368226 TJAP1Q5JTD0 557 aa13.34□□□□□ -0.27
PTPRK-207ENST00000368226 OOSP2Q86WS3 158 aa13.34□□□□□ -0.27
PTPRK-207ENST00000368226 RNF168Q8IYW5 571 aaPredicted RBP13.34□□□□□ -0.27
PTPRK-207ENST00000368226 PHACTR4Q8IZ21 702 aa13.34□□□□□ -0.27
PTPRK-207ENST00000368226 TMCO5AQ8N6Q1 288 aa13.34□□□□□ -0.27
PTPRK-207ENST00000368226 SYN2Q92777 582 aaPredicted RBP13.34□□□□□ -0.27
PTPRK-207ENST00000368226 SPATS2LQ9NUQ6 558 aaKnown RBP13.34□□□□□ -0.27
PTPRK-207ENST00000368226 KBTBD4Q9NVX7 518 aa13.34□□□□□ -0.27
PTPRK-207ENST00000368226 SP100P23497 879 aaPredicted RBP13.34□□□□□ -0.27
PTPRK-207ENST00000368226 ARID3BQ8IVW6 561 aaPredicted RBP13.34□□□□□ -0.27
PTPRK-207ENST00000368226 SCUBE3Q8IX30 993 aa13.34□□□□□ -0.27
PTPRK-207ENST00000368226 LPCAT1Q8NF37 534 aa13.34□□□□□ -0.27
PTPRK-207ENST00000368226 SEC16BQ96JE7 1060 aa13.34□□□□□ -0.27
PTPRK-207ENST00000368226 UTP6Q9NYH9 597 aaKnown RBP13.34□□□□□ -0.27
PTPRK-207ENST00000368226 EGFRP00533 1210 aa13.33□□□□□ -0.27
PTPRK-207ENST00000368226 NTRK3Q16288 839 aa13.33□□□□□ -0.27
PTPRK-207ENST00000368226 SPOCD1Q6ZMY3 1216 aa13.33□□□□□ -0.27
PTPRK-207ENST00000368226 ZNF614Q8N883 585 aa13.33□□□□□ -0.27
PTPRK-207ENST00000368226 RNF208Q9H0X6 261 aa13.33□□□□□ -0.27
PTPRK-207ENST00000368226 ATXN3LQ9H3M9 355 aa13.33□□□□□ -0.27
PTPRK-207ENST00000368226 SNCAIPQ9Y6H5 919 aa13.33□□□□□ -0.27
PTPRK-207ENST00000368226 B2RBV5 119 aa13.33□□□□□ -0.28
PTPRK-207ENST00000368226 PCNAP12004 261 aa13.33□□□□□ -0.28
PTPRK-207ENST00000368226 CYP2F1P24903 491 aa13.33□□□□□ -0.28
PTPRK-207ENST00000368226 FDFT1P37268 417 aa13.33□□□□□ -0.28
PTPRK-207ENST00000368226 MAPK9P45984 424 aa13.33□□□□□ -0.28
PTPRK-207ENST00000368226 LHX1P48742 406 aa13.33□□□□□ -0.28
PTPRK-207ENST00000368226 HPCAP84074 193 aa13.33□□□□□ -0.28
PTPRK-207ENST00000368226 BST2Q10589 180 aaKnown RBP13.33□□□□□ -0.28
PTPRK-207ENST00000368226 SLC39A12Q504Y0 691 aa13.33□□□□□ -0.28
PTPRK-207ENST00000368226 ERAP2Q6P179 960 aa13.33□□□□□ -0.28
PTPRK-207ENST00000368226 GPC2Q8N158 579 aa13.33□□□□□ -0.28
PTPRK-207ENST00000368226 IL17RAQ96F46 866 aa13.33□□□□□ -0.28
PTPRK-207ENST00000368226 HES6Q96HZ4 224 aa13.33□□□□□ -0.28
PTPRK-207ENST00000368226 PPP2R3BQ9Y5P8 575 aa13.33□□□□□ -0.28
PTPRK-207ENST00000368226 TPST1O60507 370 aa13.33□□□□□ -0.28
PTPRK-207ENST00000368226 ZNF189O75820 626 aaPredicted RBP13.33□□□□□ -0.28
PTPRK-207ENST00000368226 MICAL2O94851 1124 aa13.33□□□□□ -0.28
PTPRK-207ENST00000368226 BMPR2Q13873 1038 aa13.33□□□□□ -0.28
PTPRK-207ENST00000368226 FSCN1Q16658 493 aaKnown RBP13.33□□□□□ -0.28
PTPRK-207ENST00000368226 MOXD1Q6UVY6 613 aa13.33□□□□□ -0.28
PTPRK-207ENST00000368226 HORMAD1Q86X24 394 aa13.33□□□□□ -0.28
PTPRK-207ENST00000368226 CD302Q8IX05 232 aa13.33□□□□□ -0.28
PTPRK-207ENST00000368226 MAGED4Q96JG8 741 aa13.33□□□□□ -0.28
PTPRK-207ENST00000368226 MT-CO1P00395 513 aa13.33□□□□□ -0.28
PTPRK-207ENST00000368226 PLCL1Q15111 1095 aa13.33□□□□□ -0.28
PTPRK-207ENST00000368226 FAM83EQ2M2I3 478 aa13.33□□□□□ -0.28
PTPRK-207ENST00000368226 FBXW10Q5XX13 1052 aa13.33□□□□□ -0.28
PTPRK-207ENST00000368226 ZNF555Q8NEP9 628 aa13.33□□□□□ -0.28
PTPRK-207ENST00000368226 VPS50Q96JG6 964 aa13.33□□□□□ -0.28
PTPRK-207ENST00000368226 NFKBIZQ9BYH8 718 aa13.33□□□□□ -0.28
PTPRK-207ENST00000368226 RPL10AP62906 217 aaKnown RBP13.33□□□□□ -0.28
PTPRK-207ENST00000368226 POU6F1Q14863 301 aa13.33□□□□□ -0.28
PTPRK-207ENST00000368226 PSD3Q9NYI0 1048 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms