RNA–Protein interactions for RNA: ENST00000358181.8

CHD3-202, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CHD3, Length 7,286 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-202ENST00000358181 SRP54P61011 504 aaKnown RBP10.08□□□□□ -0.8
CHD3-202ENST00000358181 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.08□□□□□ -0.8
CHD3-202ENST00000358181 KRT73Q86Y46 540 aa10.08□□□□□ -0.8
CHD3-202ENST00000358181 RCOR2Q8IZ40 523 aa10.08□□□□□ -0.8
CHD3-202ENST00000358181 GAS2L1Q99501 681 aaPredicted RBP10.08□□□□□ -0.8
CHD3-202ENST00000358181 SUCOQ9UBS9 1254 aaKnown RBP10.08□□□□□ -0.8
CHD3-202ENST00000358181 USP18Q9UMW8 372 aa10.08□□□□□ -0.8
CHD3-202ENST00000358181 NEO1Q92859 1461 aa10.08□□□□□ -0.8
CHD3-202ENST00000358181 H7C4K7 107 aa10.08□□□□□ -0.8
CHD3-202ENST00000358181 TBXAS1P24557 533 aaPredicted RBP10.08□□□□□ -0.8
CHD3-202ENST00000358181 TALDO1P37837 337 aa10.08□□□□□ -0.8
CHD3-202ENST00000358181 SMTNL2Q2TAL5 461 aa10.08□□□□□ -0.8
CHD3-202ENST00000358181 RAP1GAP2Q684P5 730 aa10.08□□□□□ -0.8
CHD3-202ENST00000358181 UGT3A1Q6NUS8 523 aa10.08□□□□□ -0.8
CHD3-202ENST00000358181 PRR23BQ6ZRT6 265 aa10.08□□□□□ -0.8
CHD3-202ENST00000358181 OR10G6Q8NH81 332 aa10.08□□□□□ -0.8
CHD3-202ENST00000358181 TRNT1Q96Q11 434 aaKnown RBP10.08□□□□□ -0.8
CHD3-202ENST00000358181 KCNN2Q9H2S1 579 aa10.08□□□□□ -0.8
CHD3-202ENST00000358181 ZCCHC11Q5TAX3 1644 aaKnown RBP10.08□□□□□ -0.8
CHD3-202ENST00000358181 AP3B1O00203 1094 aa10.08□□□□□ -0.8
CHD3-202ENST00000358181 CBX4O00257 560 aa10.08□□□□□ -0.8
CHD3-202ENST00000358181 RPS6KA4O75676 772 aa10.08□□□□□ -0.8
CHD3-202ENST00000358181 ATP6V1B2P21281 511 aa10.08□□□□□ -0.8
CHD3-202ENST00000358181 OMA1Q96E52 524 aa10.08□□□□□ -0.8
CHD3-202ENST00000358181 DHTKD1Q96HY7 919 aaPredicted RBP10.08□□□□□ -0.8
CHD3-202ENST00000358181 MAML3Q96JK9 1138 aa10.08□□□□□ -0.8
CHD3-202ENST00000358181 LAD1O00515 517 aa10.08□□□□□ -0.8
CHD3-202ENST00000358181 GRIN3BO60391 1043 aa10.08□□□□□ -0.8
CHD3-202ENST00000358181 MAFKO60675 156 aa10.08□□□□□ -0.8
CHD3-202ENST00000358181 MAGEA10P43363 369 aaPredicted RBP10.08□□□□□ -0.8
CHD3-202ENST00000358181 FGD3Q5JSP0 725 aa10.08□□□□□ -0.8
CHD3-202ENST00000358181 GLT1D1Q96MS3 346 aa10.08□□□□□ -0.8
CHD3-202ENST00000358181 ATXN3LQ9H3M9 355 aa10.08□□□□□ -0.8
CHD3-202ENST00000358181 PARVAQ9NVD7 372 aa10.08□□□□□ -0.8
CHD3-202ENST00000358181 ATP7BP35670 1465 aa10.08□□□□□ -0.8
CHD3-202ENST00000358181 KDM5CP41229 1560 aa10.08□□□□□ -0.8
CHD3-202ENST00000358181 KHDRBS3O75525 346 aaKnown RBP10.08□□□□□ -0.8
CHD3-202ENST00000358181 ATAD3BQ5T9A4 648 aa10.08□□□□□ -0.8
CHD3-202ENST00000358181 TMEM179Q6ZVK1 233 aa10.08□□□□□ -0.8
CHD3-202ENST00000358181 MCPH1Q8NEM0 835 aa10.08□□□□□ -0.8
CHD3-202ENST00000358181 MCEEQ96PE7 176 aa10.08□□□□□ -0.8
CHD3-202ENST00000358181 STRBPQ96SI9 672 aaKnown RBP10.08□□□□□ -0.8
CHD3-202ENST00000358181 INTS2Q9H0H0 1204 aaKnown RBP10.08□□□□□ -0.8
CHD3-202ENST00000358181 UVRAGQ9P2Y5 699 aa10.08□□□□□ -0.8
CHD3-202ENST00000358181 ADAMTS1Q9UHI8 967 aa10.08□□□□□ -0.8
CHD3-202ENST00000358181 GH1P01241 217 aa10.08□□□□□ -0.8
CHD3-202ENST00000358181 DBIP07108 87 aaKnown RBP10.08□□□□□ -0.8
CHD3-202ENST00000358181 KCNJ5P48544 419 aa10.08□□□□□ -0.8
CHD3-202ENST00000358181 THOP1P52888 689 aa10.08□□□□□ -0.8
CHD3-202ENST00000358181 PRKAG1P54619 331 aa10.08□□□□□ -0.8
CHD3-202ENST00000358181 TRAP1Q12931 704 aaKnown RBP10.08□□□□□ -0.8
CHD3-202ENST00000358181 ALCAMQ13740 583 aa10.08□□□□□ -0.8
CHD3-202ENST00000358181 TRADDQ15628 312 aa10.08□□□□□ -0.8
CHD3-202ENST00000358181 NDUFAF6Q330K2 333 aa10.08□□□□□ -0.8
CHD3-202ENST00000358181 ATP6V0D2Q8N8Y2 350 aa10.08□□□□□ -0.8
CHD3-202ENST00000358181 LINC00301Q8NCQ3 95 aa10.08□□□□□ -0.8
CHD3-202ENST00000358181 CDADC1Q9BWV3 514 aa10.08□□□□□ -0.8
CHD3-202ENST00000358181 UBXN6Q9BZV1 441 aa10.08□□□□□ -0.8
CHD3-202ENST00000358181 ZNHIT2Q9UHR6 403 aa10.08□□□□□ -0.8
CHD3-202ENST00000358181 TRIM17Q9Y577 477 aa10.08□□□□□ -0.8
CHD3-202ENST00000358181 MCIDASD6RGH6 385 aa10.07□□□□□ -0.8
CHD3-202ENST00000358181 CHUKO15111 745 aa10.07□□□□□ -0.8
CHD3-202ENST00000358181 NCK2O43639 380 aa10.07□□□□□ -0.8
CHD3-202ENST00000358181 ZNF500O60304 480 aaPredicted RBP10.07□□□□□ -0.8
CHD3-202ENST00000358181 RBM6P78332 1123 aaKnown RBP10.07□□□□□ -0.8
CHD3-202ENST00000358181 FKBP3Q00688 224 aaKnown RBP10.07□□□□□ -0.8
CHD3-202ENST00000358181 TRPV3Q8NET8 790 aa10.07□□□□□ -0.8
CHD3-202ENST00000358181 ZNF671Q8TAW3 534 aa10.07□□□□□ -0.8
CHD3-202ENST00000358181 TINF2Q9BSI4 451 aa10.07□□□□□ -0.8
CHD3-202ENST00000358181 PACSIN1Q9BY11 444 aa10.07□□□□□ -0.8
CHD3-202ENST00000358181 CFAP74Q9C0B2 1584 aa10.07□□□□□ -0.8
CHD3-202ENST00000358181 HMGB3O15347 200 aaKnown RBP10.07□□□□□ -0.8
CHD3-202ENST00000358181 SCN2BO60939 215 aa10.07□□□□□ -0.8
CHD3-202ENST00000358181 PGM1P36871 562 aa10.07□□□□□ -0.8
CHD3-202ENST00000358181 DUOXA2Q1HG44 320 aa10.07□□□□□ -0.8
CHD3-202ENST00000358181 ATP13A4Q4VNC1 1196 aa10.07□□□□□ -0.8
CHD3-202ENST00000358181 IZUMO3Q5VZ72 239 aa10.07□□□□□ -0.8
CHD3-202ENST00000358181 TRPM8Q7Z2W7 1104 aa10.07□□□□□ -0.8
CHD3-202ENST00000358181 RHOT1Q8IXI2 618 aa10.07□□□□□ -0.8
CHD3-202ENST00000358181 ACSF2Q96CM8 615 aaPredicted RBP10.07□□□□□ -0.8
CHD3-202ENST00000358181 MED15Q96RN5 788 aa10.07□□□□□ -0.8
CHD3-202ENST00000358181 LXNQ9BS40 222 aa10.07□□□□□ -0.8
CHD3-202ENST00000358181 MORC2Q9Y6X9 1032 aaPredicted RBP10.07□□□□□ -0.8
CHD3-202ENST00000358181 PSMD3O43242 534 aa10.07□□□□□ -0.8
CHD3-202ENST00000358181 ATG7O95352 703 aa10.07□□□□□ -0.8
CHD3-202ENST00000358181 PTSQ03393 145 aa10.07□□□□□ -0.8
CHD3-202ENST00000358181 SNRNP27Q8WVK2 155 aaKnown RBP10.07□□□□□ -0.8
CHD3-202ENST00000358181 TRIM39Q9HCM9 518 aa10.07□□□□□ -0.8
CHD3-202ENST00000358181 ADAM30Q9UKF2 790 aa10.07□□□□□ -0.8
CHD3-202ENST00000358181 OR10H2O60403 315 aa10.07□□□□□ -0.8
CHD3-202ENST00000358181 SERPINA3P01011 423 aa10.07□□□□□ -0.8
CHD3-202ENST00000358181 FTLP02792 175 aaPredicted RBP10.07□□□□□ -0.8
CHD3-202ENST00000358181 GCFC2P16383 781 aaKnown RBP10.07□□□□□ -0.8
CHD3-202ENST00000358181 GJA8P48165 433 aa10.07□□□□□ -0.8
CHD3-202ENST00000358181 EFEMP1Q12805 493 aa10.07□□□□□ -0.8
CHD3-202ENST00000358181 RIN1Q13671 783 aa10.07□□□□□ -0.8
CHD3-202ENST00000358181 KLHL12Q53G59 568 aa10.07□□□□□ -0.8
CHD3-202ENST00000358181 LRRC70Q7Z2Q7 622 aa10.07□□□□□ -0.8
CHD3-202ENST00000358181 TRIM63Q969Q1 353 aa10.07□□□□□ -0.8
CHD3-202ENST00000358181 FAM96AQ9H5X1 160 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms