RNA–Protein interactions for RNA: ENST00000357980.8

TPM1-205, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 1,800 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-205ENST00000357980 GJB5O95377 273 aa17.87■□□□□ 0.45
TPM1-205ENST00000357980 GLI1P08151 1106 aa17.87■□□□□ 0.45
TPM1-205ENST00000357980 MIPP30301 263 aa17.87■□□□□ 0.45
TPM1-205ENST00000357980 SDC4P31431 198 aa17.87■□□□□ 0.45
TPM1-205ENST00000357980 HTRA4P83105 476 aaPredicted RBP17.87■□□□□ 0.45
TPM1-205ENST00000357980 LONRF2Q1L5Z9 754 aa17.87■□□□□ 0.45
TPM1-205ENST00000357980 USP41Q3LFD5 358 aa17.87■□□□□ 0.45
TPM1-205ENST00000357980 ATP13A4Q4VNC1 1196 aa17.87■□□□□ 0.45
TPM1-205ENST00000357980 RAB6CQ53S08 254 aa17.87■□□□□ 0.45
TPM1-205ENST00000357980 SPOUT1Q5T280 376 aaKnown RBP17.87■□□□□ 0.45
TPM1-205ENST00000357980 SCML4Q8N228 414 aa17.87■□□□□ 0.45
TPM1-205ENST00000357980 COLGALT1Q8NBJ5 622 aa17.87■□□□□ 0.45
TPM1-205ENST00000357980 DDX23Q9BUQ8 820 aaKnown RBP17.87■□□□□ 0.45
TPM1-205ENST00000357980 AP1M1Q9BXS5 423 aa17.87■□□□□ 0.45
TPM1-205ENST00000357980 ADAM33Q9BZ11 813 aa17.87■□□□□ 0.45
TPM1-205ENST00000357980 RAB6CQ9H0N0 254 aa17.87■□□□□ 0.45
TPM1-205ENST00000357980 CXXC1Q9P0U4 656 aaPredicted RBP17.87■□□□□ 0.45
TPM1-205ENST00000357980 MYO16Q9Y6X6 1858 aa17.87■□□□□ 0.45
TPM1-205ENST00000357980 TNFRSF10BO14763 440 aa17.86■□□□□ 0.45
TPM1-205ENST00000357980 DAB1O75553 588 aa17.86■□□□□ 0.45
TPM1-205ENST00000357980 GJC1P36383 396 aa17.86■□□□□ 0.45
TPM1-205ENST00000357980 MAGEA11P43364 429 aa17.86■□□□□ 0.45
TPM1-205ENST00000357980 YWHAZP63104 245 aaKnown RBP17.86■□□□□ 0.45
TPM1-205ENST00000357980 GPR17Q13304 367 aa17.86■□□□□ 0.45
TPM1-205ENST00000357980 PM20D1Q6GTS8 502 aa17.86■□□□□ 0.45
TPM1-205ENST00000357980 PSRC1Q6PGN9 363 aaPredicted RBP17.86■□□□□ 0.45
TPM1-205ENST00000357980 PRSS55Q6UWB4 352 aaPredicted RBP17.86■□□□□ 0.45
TPM1-205ENST00000357980 VSTM1Q6UX27 236 aa17.86■□□□□ 0.45
TPM1-205ENST00000357980 CYP4V2Q6ZWL3 525 aaPredicted RBP17.86■□□□□ 0.45
TPM1-205ENST00000357980 SLC13A5Q86YT5 568 aaPredicted RBP17.86■□□□□ 0.45
TPM1-205ENST00000357980 GPR161Q8N6U8 529 aaKnown RBP17.86■□□□□ 0.45
TPM1-205ENST00000357980 PIK3R5Q8WYR1 880 aa17.86■□□□□ 0.45
TPM1-205ENST00000357980 CENPIQ92674 756 aaPredicted RBP17.86■□□□□ 0.45
TPM1-205ENST00000357980 SLC2A13Q96QE2 648 aa17.86■□□□□ 0.45
TPM1-205ENST00000357980 EPC1Q9H2F5 836 aa17.86■□□□□ 0.45
TPM1-205ENST00000357980 ANKZF1Q9H8Y5 726 aa17.86■□□□□ 0.45
TPM1-205ENST00000357980 MTRRQ9UBK8 725 aa17.86■□□□□ 0.45
TPM1-205ENST00000357980 USP18Q9UMW8 372 aa17.86■□□□□ 0.45
TPM1-205ENST00000357980 NR2E1Q9Y466 385 aa17.86■□□□□ 0.45
TPM1-205ENST00000357980 PCDHB5Q9Y5E4 795 aa17.86■□□□□ 0.45
TPM1-205ENST00000357980 USP3Q9Y6I4 520 aa17.86■□□□□ 0.45
TPM1-205ENST00000357980 PLXNA3P51805 1871 aa17.86■□□□□ 0.45
TPM1-205ENST00000357980 CARNS1A5YM72 827 aa17.86■□□□□ 0.45
TPM1-205ENST00000357980 YJEFN3A6XGL0 299 aa17.86■□□□□ 0.45
TPM1-205ENST00000357980 E7ENQ6 273 aa17.86■□□□□ 0.45
TPM1-205ENST00000357980 KRIT1O00522 736 aa17.86■□□□□ 0.45
TPM1-205ENST00000357980 SART1O43290 800 aaKnown RBP17.86■□□□□ 0.45
TPM1-205ENST00000357980 ZRANB2O95218 330 aaKnown RBP eCLIP17.86■□□□□ 0.45
TPM1-205ENST00000357980 VNN2O95498 520 aa17.86■□□□□ 0.45
TPM1-205ENST00000357980 ZBED1O96006 694 aa17.86■□□□□ 0.45
TPM1-205ENST00000357980 USP17L7P0C7H9 530 aa17.86■□□□□ 0.45
TPM1-205ENST00000357980 LINC00271P0C7V0 271 aa17.86■□□□□ 0.45
TPM1-205ENST00000357980 TFE3P19532 575 aaPredicted RBP17.86■□□□□ 0.45
TPM1-205ENST00000357980 GRIK1P39086 918 aa17.86■□□□□ 0.45
TPM1-205ENST00000357980 MATKP42679 507 aa17.86■□□□□ 0.45
TPM1-205ENST00000357980 ATP11AP98196 1134 aa17.86■□□□□ 0.45
TPM1-205ENST00000357980 HADHQ16836 314 aaKnown RBP17.86■□□□□ 0.45
TPM1-205ENST00000357980 CDO1Q16878 200 aa17.86■□□□□ 0.45
TPM1-205ENST00000357980 HFE2Q6ZVN8 426 aa17.86■□□□□ 0.45
TPM1-205ENST00000357980 ZDHHC14Q8IZN3 488 aa17.86■□□□□ 0.45
TPM1-205ENST00000357980 FAM172AQ8WUF8 416 aa17.86■□□□□ 0.45
TPM1-205ENST00000357980 NT5C3BQ969T7 300 aa17.86■□□□□ 0.45
TPM1-205ENST00000357980 FAM149B1Q96BN6 582 aa17.86■□□□□ 0.45
TPM1-205ENST00000357980 PEBP4Q96S96 227 aa17.86■□□□□ 0.45
TPM1-205ENST00000357980 KLHL11Q9NVR0 708 aa17.86■□□□□ 0.45
TPM1-205ENST00000357980 DDX56Q9NY93 547 aaKnown RBP17.86■□□□□ 0.45
TPM1-205ENST00000357980 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP17.86■□□□□ 0.45
TPM1-205ENST00000357980 GREB1Q4ZG55 1949 aa17.85■□□□□ 0.45
TPM1-205ENST00000357980 TCRBV7S2A1N4TA0A589 114 aa17.85■□□□□ 0.45
TPM1-205ENST00000357980 CCDC188H7C350 402 aa17.85■□□□□ 0.45
TPM1-205ENST00000357980 TRUB2O95900 331 aaKnown RBP17.85■□□□□ 0.45
TPM1-205ENST00000357980 SOD2P04179 222 aa17.85■□□□□ 0.45
TPM1-205ENST00000357980 FYNP06241 537 aa17.85■□□□□ 0.45
TPM1-205ENST00000357980 KRT7P08729 469 aa17.85■□□□□ 0.45
TPM1-205ENST00000357980 HDAC4P56524 1084 aa17.85■□□□□ 0.45
TPM1-205ENST00000357980 SMARCB1Q12824 385 aa17.85■□□□□ 0.45
TPM1-205ENST00000357980 SLC8B1Q6J4K2 584 aa17.85■□□□□ 0.45
TPM1-205ENST00000357980 ANKS1BQ7Z6G8 1248 aa17.85■□□□□ 0.45
TPM1-205ENST00000357980 RCOR2Q8IZ40 523 aa17.85■□□□□ 0.45
TPM1-205ENST00000357980 DEFB106AQ8N104 65 aa17.85■□□□□ 0.45
TPM1-205ENST00000357980 ATAD1Q8NBU5 361 aa17.85■□□□□ 0.45
TPM1-205ENST00000357980 RIN2Q8WYP3 895 aaPredicted RBP17.85■□□□□ 0.45
TPM1-205ENST00000357980 IRGQQ8WZA9 623 aa17.85■□□□□ 0.45
TPM1-205ENST00000357980 TMEM169Q96HH4 297 aa17.85■□□□□ 0.45
TPM1-205ENST00000357980 PGLYRP2Q96PD5 576 aa17.85■□□□□ 0.45
TPM1-205ENST00000357980 HERPUD2Q9BSE4 406 aa17.85■□□□□ 0.45
TPM1-205ENST00000357980 POPDC2Q9HBU9 364 aa17.85■□□□□ 0.45
TPM1-205ENST00000357980 SPG21Q9NZD8 308 aa17.85■□□□□ 0.45
TPM1-205ENST00000357980 BACE2Q9Y5Z0 518 aa17.85■□□□□ 0.45
TPM1-205ENST00000357980 MTMR11A4FU01 709 aa17.84■□□□□ 0.45
TPM1-205ENST00000357980 C3orf70A6NLC5 250 aaPredicted RBP17.84■□□□□ 0.45
TPM1-205ENST00000357980 FSCN2O14926 492 aa17.84■□□□□ 0.45
TPM1-205ENST00000357980 KRT1P04264 644 aa17.84■□□□□ 0.45
TPM1-205ENST00000357980 RHOXF2BP0C7M4 288 aa17.84■□□□□ 0.45
TPM1-205ENST00000357980 CPB1P15086 417 aa17.84■□□□□ 0.45
TPM1-205ENST00000357980 SYN1P17600 705 aa17.84■□□□□ 0.45
TPM1-205ENST00000357980 SLC5A3P53794 718 aa17.84■□□□□ 0.45
TPM1-205ENST00000357980 SIX1Q15475 284 aaPredicted RBP17.84■□□□□ 0.45
TPM1-205ENST00000357980 PSMD5Q16401 504 aa17.84■□□□□ 0.45
TPM1-205ENST00000357980 SMTNL2Q2TAL5 461 aa17.84■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms