RNA–Protein interactions for RNA: ENST00000357604.9

UPF2-202, Transcript of UPF2, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF2, Length 5,193 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2-202ENST00000357604 CBWD5Q5RIA9 395 aa9.61□□□□□ -0.87
UPF2-202ENST00000357604 GRAMD4Q6IC98 578 aa9.61□□□□□ -0.87
UPF2-202ENST00000357604 ALKAL1Q6UXT8 129 aa9.61□□□□□ -0.87
UPF2-202ENST00000357604 CCDC89Q8N998 374 aa9.61□□□□□ -0.87
UPF2-202ENST00000357604 MYLIPQ8WY64 445 aa9.61□□□□□ -0.87
UPF2-202ENST00000357604 ATP2A3Q93084 1043 aa9.61□□□□□ -0.87
UPF2-202ENST00000357604 ZNF689Q96CS4 500 aaPredicted RBP9.61□□□□□ -0.87
UPF2-202ENST00000357604 SPACA7Q96KW9 195 aa9.61□□□□□ -0.87
UPF2-202ENST00000357604 TRMT61BQ9BVS5 477 aaKnown RBP9.61□□□□□ -0.87
UPF2-202ENST00000357604 ANAPC7Q9UJX3 599 aa9.61□□□□□ -0.87
UPF2-202ENST00000357604 NCKAP1Q9Y2A7 1128 aa9.61□□□□□ -0.87
UPF2-202ENST00000357604 MCF2LO15068 1137 aa9.61□□□□□ -0.87
UPF2-202ENST00000357604 ORC1Q13415 861 aa9.61□□□□□ -0.87
UPF2-202ENST00000357604 DDR2Q16832 855 aa9.61□□□□□ -0.87
UPF2-202ENST00000357604 SPPL3Q8TCT6 385 aa9.61□□□□□ -0.87
UPF2-202ENST00000357604 CPA5Q8WXQ8 436 aa9.61□□□□□ -0.87
UPF2-202ENST00000357604 USP13Q92995 863 aaPredicted RBP9.61□□□□□ -0.87
UPF2-202ENST00000357604 CWH43Q9H720 699 aa9.61□□□□□ -0.87
UPF2-202ENST00000357604 RNF19AQ9NV58 838 aa9.61□□□□□ -0.87
UPF2-202ENST00000357604 PI4K2BG5E9Z4 385 aa9.61□□□□□ -0.87
UPF2-202ENST00000357604 ATP5BP06576 529 aaKnown RBP9.61□□□□□ -0.87
UPF2-202ENST00000357604 RGS19P49795 217 aa9.61□□□□□ -0.87
UPF2-202ENST00000357604 YWHAZP63104 245 aaKnown RBP9.61□□□□□ -0.87
UPF2-202ENST00000357604 ACCSLQ4AC99 568 aa9.61□□□□□ -0.87
UPF2-202ENST00000357604 ZCWPW2Q504Y3 356 aa9.61□□□□□ -0.87
UPF2-202ENST00000357604 LCLAT1Q6UWP7 414 aa9.61□□□□□ -0.87
UPF2-202ENST00000357604 CARNMT1Q8N4J0 409 aa9.61□□□□□ -0.87
UPF2-202ENST00000357604 AUTS2Q8WXX7 1259 aa9.61□□□□□ -0.87
UPF2-202ENST00000357604 PABPC5Q96DU9 382 aaKnown RBP9.61□□□□□ -0.87
UPF2-202ENST00000357604 BCO2Q9BYV7 579 aa9.61□□□□□ -0.87
UPF2-202ENST00000357604 MARCH2Q9P0N8 246 aa9.61□□□□□ -0.87
UPF2-202ENST00000357604 IGSF9Q9P2J2 1179 aa9.61□□□□□ -0.87
UPF2-202ENST00000357604 PLA2G4CQ9UP65 541 aa9.61□□□□□ -0.87
UPF2-202ENST00000357604 MTMR11A4FU01 709 aa9.6□□□□□ -0.87
UPF2-202ENST00000357604 M0QYT0 321 aa9.6□□□□□ -0.87
UPF2-202ENST00000357604 PPP1R12AO14974 1030 aaPredicted RBP9.6□□□□□ -0.87
UPF2-202ENST00000357604 RENBPP51606 427 aa9.6□□□□□ -0.87
UPF2-202ENST00000357604 VAV2P52735 878 aa9.6□□□□□ -0.87
UPF2-202ENST00000357604 TUBB4BP68371 445 aa9.6□□□□□ -0.87
UPF2-202ENST00000357604 ACAP1Q15027 740 aa9.6□□□□□ -0.87
UPF2-202ENST00000357604 MPPE1Q53F39 396 aa9.6□□□□□ -0.87
UPF2-202ENST00000357604 ZNF449Q6P9G9 518 aa9.6□□□□□ -0.87
UPF2-202ENST00000357604 ZC3H3Q8IXZ2 948 aaKnown RBP9.6□□□□□ -0.87
UPF2-202ENST00000357604 TCEAL8Q8IYN2 117 aa9.6□□□□□ -0.87
UPF2-202ENST00000357604 SP7Q8TDD2 431 aaPredicted RBP9.6□□□□□ -0.87
UPF2-202ENST00000357604 CLP1Q92989 425 aaKnown RBP9.6□□□□□ -0.87
UPF2-202ENST00000357604 SEPT10Q9P0V9 454 aa9.6□□□□□ -0.87
UPF2-202ENST00000357604 C5orf67F2Z3F1 127 aa9.6□□□□□ -0.87
UPF2-202ENST00000357604 CREB3O43889 395 aa9.6□□□□□ -0.87
UPF2-202ENST00000357604 ATP1A3P13637 1013 aa9.6□□□□□ -0.87
UPF2-202ENST00000357604 HOXA9P31269 272 aa9.6□□□□□ -0.87
UPF2-202ENST00000357604 SULT2A1Q06520 285 aa9.6□□□□□ -0.87
UPF2-202ENST00000357604 DSC1Q08554 894 aa9.6□□□□□ -0.87
UPF2-202ENST00000357604 TMC5Q6UXY8 1006 aa9.6□□□□□ -0.87
UPF2-202ENST00000357604 GLIS3Q8NEA6 775 aa9.6□□□□□ -0.87
UPF2-202ENST00000357604 IRF2BPLQ9H1B7 796 aa9.6□□□□□ -0.87
UPF2-202ENST00000357604 TASP1Q9H6P5 420 aa9.6□□□□□ -0.87
UPF2-202ENST00000357604 DDIT4Q9NX09 232 aa9.6□□□□□ -0.87
UPF2-202ENST00000357604 F8VP50 259 aa9.6□□□□□ -0.87
UPF2-202ENST00000357604 PSMD3O43242 534 aa9.6□□□□□ -0.87
UPF2-202ENST00000357604 MAP3K13O43283 966 aa9.6□□□□□ -0.87
UPF2-202ENST00000357604 EDIL3O43854 480 aa9.6□□□□□ -0.87
UPF2-202ENST00000357604 RPL17P18621 184 aaKnown RBP9.6□□□□□ -0.87
UPF2-202ENST00000357604 POLR2EP19388 210 aaKnown RBP9.6□□□□□ -0.87
UPF2-202ENST00000357604 CDR1P51861 262 aa9.6□□□□□ -0.87
UPF2-202ENST00000357604 CDH8P55286 799 aa9.6□□□□□ -0.87
UPF2-202ENST00000357604 PPP1R7Q15435 360 aa9.6□□□□□ -0.87
UPF2-202ENST00000357604 SOWAHAQ2M3V2 549 aa9.6□□□□□ -0.87
UPF2-202ENST00000357604 ITPRIPL1Q6GPH6 555 aa9.6□□□□□ -0.87
UPF2-202ENST00000357604 FEZF2Q8TBJ5 459 aa9.6□□□□□ -0.87
UPF2-202ENST00000357604 ZNF606Q8WXB4 792 aa9.6□□□□□ -0.87
UPF2-202ENST00000357604 IRF7Q92985 503 aa9.6□□□□□ -0.87
UPF2-202ENST00000357604 TTC1Q99614 292 aa9.6□□□□□ -0.87
UPF2-202ENST00000357604 ACBD3Q9H3P7 528 aa9.6□□□□□ -0.87
UPF2-202ENST00000357604 MIOSQ9NXC5 875 aa9.6□□□□□ -0.87
UPF2-202ENST00000357604 MYH7BA7E2Y1 1941 aa9.6□□□□□ -0.87
UPF2-202ENST00000357604 PER2O15055 1255 aa9.6□□□□□ -0.87
UPF2-202ENST00000357604 TEX28O15482 410 aa9.6□□□□□ -0.87
UPF2-202ENST00000357604 ATF2P15336 505 aa9.6□□□□□ -0.87
UPF2-202ENST00000357604 CDKL3Q8IVW4 592 aaPredicted RBP9.6□□□□□ -0.87
UPF2-202ENST00000357604 CRYBG2Q8N1P7 616 aa9.6□□□□□ -0.87
UPF2-202ENST00000357604 OTUD6BQ8N6M0 293 aa9.6□□□□□ -0.87
UPF2-202ENST00000357604 MAB21L3Q8N8X9 362 aa9.6□□□□□ -0.87
UPF2-202ENST00000357604 KIAA1524Q8TCG1 905 aa9.6□□□□□ -0.87
UPF2-202ENST00000357604 CCHCR1Q8TD31 782 aa9.6□□□□□ -0.87
UPF2-202ENST00000357604 WFIKKN2Q8TEU8 576 aa9.6□□□□□ -0.87
UPF2-202ENST00000357604 RFFLQ8WZ73 363 aa9.6□□□□□ -0.87
UPF2-202ENST00000357604 OTUB2Q96DC9 234 aa9.6□□□□□ -0.87
UPF2-202ENST00000357604 ULBP1Q9BZM6 244 aa9.6□□□□□ -0.87
UPF2-202ENST00000357604 UBE2ZQ9H832 354 aaPredicted RBP9.6□□□□□ -0.87
UPF2-202ENST00000357604 GDE1Q9NZC3 331 aa9.6□□□□□ -0.87
UPF2-202ENST00000357604 TGM5O43548 720 aa9.59□□□□□ -0.87
UPF2-202ENST00000357604 HTR7P34969 479 aa9.59□□□□□ -0.87
UPF2-202ENST00000357604 SLC5A3P53794 718 aa9.59□□□□□ -0.87
UPF2-202ENST00000357604 GNG11P61952 73 aa9.59□□□□□ -0.87
UPF2-202ENST00000357604 MBTPS1Q14703 1052 aa9.59□□□□□ -0.87
UPF2-202ENST00000357604 DNAJB7Q7Z6W7 309 aaPredicted RBP9.59□□□□□ -0.87
UPF2-202ENST00000357604 MIB1Q86YT6 1006 aa9.59□□□□□ -0.87
UPF2-202ENST00000357604 RHOT1Q8IXI2 618 aa9.59□□□□□ -0.87
UPF2-202ENST00000357604 STK32AQ8WU08 396 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms