RNA–Protein interactions for RNA: ENST00000356805.8

SPTBN1-202, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTBN1, Length 8,482 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-202ENST00000356805 LRRC74BQ6ZQY2 392 aa11.88□□□□□ -0.51
SPTBN1-202ENST00000356805 LRRC6Q86X45 466 aa11.88□□□□□ -0.51
SPTBN1-202ENST00000356805 STRBPQ96SI9 672 aaKnown RBP11.88□□□□□ -0.51
SPTBN1-202ENST00000356805 MKNK1Q9BUB5 465 aa11.88□□□□□ -0.51
SPTBN1-202ENST00000356805 RMI1Q9H9A7 625 aa11.88□□□□□ -0.51
SPTBN1-202ENST00000356805 MCM8Q9UJA3 840 aa11.88□□□□□ -0.51
SPTBN1-202ENST00000356805 SORCS3Q9UPU3 1222 aa11.88□□□□□ -0.51
SPTBN1-202ENST00000356805 KAT6AQ92794 2004 aa11.88□□□□□ -0.51
SPTBN1-202ENST00000356805 A0A087X0T9 212 aa11.88□□□□□ -0.51
SPTBN1-202ENST00000356805 SMNDC1O75940 238 aaKnown RBP eCLIP11.88□□□□□ -0.51
SPTBN1-202ENST00000356805 ITGA4P13612 1032 aa11.88□□□□□ -0.51
SPTBN1-202ENST00000356805 STILQ15468 1287 aa11.88□□□□□ -0.51
SPTBN1-202ENST00000356805 ZKSCAN4Q969J2 545 aaPredicted RBP11.88□□□□□ -0.51
SPTBN1-202ENST00000356805 GALNT8Q9NY28 637 aa11.88□□□□□ -0.51
SPTBN1-202ENST00000356805 ENOPH1Q9UHY7 261 aa11.88□□□□□ -0.51
SPTBN1-202ENST00000356805 AKR1B1P15121 316 aa11.88□□□□□ -0.51
SPTBN1-202ENST00000356805 STAT5BP51692 787 aa11.88□□□□□ -0.51
SPTBN1-202ENST00000356805 RAD23AP54725 363 aa11.88□□□□□ -0.51
SPTBN1-202ENST00000356805 C12orf60Q5U649 245 aa11.88□□□□□ -0.51
SPTBN1-202ENST00000356805 BLOC1S5Q8TDH9 187 aa11.88□□□□□ -0.51
SPTBN1-202ENST00000356805 TRIM51Q9BSJ1 452 aa11.88□□□□□ -0.51
SPTBN1-202ENST00000356805 NAGPAQ9UK23 515 aa11.88□□□□□ -0.51
SPTBN1-202ENST00000356805 ASB14A6NK59 587 aa11.88□□□□□ -0.51
SPTBN1-202ENST00000356805 DNAJC3Q13217 504 aa11.88□□□□□ -0.51
SPTBN1-202ENST00000356805 SGSM1Q2NKQ1 1148 aa11.88□□□□□ -0.51
SPTBN1-202ENST00000356805 PPIL6Q8IXY8 311 aa11.88□□□□□ -0.51
SPTBN1-202ENST00000356805 KLHL23Q8NBE8 558 aa11.88□□□□□ -0.51
SPTBN1-202ENST00000356805 DLG3Q92796 817 aa11.88□□□□□ -0.51
SPTBN1-202ENST00000356805 MED8Q96G25 268 aa11.88□□□□□ -0.51
SPTBN1-202ENST00000356805 TMCO1Q9UM00 188 aa11.88□□□□□ -0.51
SPTBN1-202ENST00000356805 TPST1O60507 370 aa11.88□□□□□ -0.51
SPTBN1-202ENST00000356805 EFNA5P52803 228 aa11.88□□□□□ -0.51
SPTBN1-202ENST00000356805 RAB15P59190 212 aa11.88□□□□□ -0.51
SPTBN1-202ENST00000356805 CYP4A22Q5TCH4 519 aa11.88□□□□□ -0.51
SPTBN1-202ENST00000356805 HAUS6Q7Z4H7 955 aa11.88□□□□□ -0.51
SPTBN1-202ENST00000356805 RNPEPL1Q9HAU8 725 aa11.88□□□□□ -0.51
SPTBN1-202ENST00000356805 SMARCAL1Q9NZC9 954 aa11.88□□□□□ -0.51
SPTBN1-202ENST00000356805 HEY2Q9UBP5 337 aa11.88□□□□□ -0.51
SPTBN1-202ENST00000356805 EIF3LQ9Y262 564 aaKnown RBP11.88□□□□□ -0.51
SPTBN1-202ENST00000356805 KLHL20Q9Y2M5 609 aa11.88□□□□□ -0.51
SPTBN1-202ENST00000356805 PCDHA10Q9Y5I2 948 aa11.88□□□□□ -0.51
SPTBN1-202ENST00000356805 S100A9P06702 114 aaKnown RBP11.87□□□□□ -0.51
SPTBN1-202ENST00000356805 UCHL3P15374 230 aa11.87□□□□□ -0.51
SPTBN1-202ENST00000356805 NOS3P29474 1203 aa11.87□□□□□ -0.51
SPTBN1-202ENST00000356805 GPR1P46091 355 aa11.87□□□□□ -0.51
SPTBN1-202ENST00000356805 CPA2P48052 419 aa11.87□□□□□ -0.51
SPTBN1-202ENST00000356805 EPS8Q12929 822 aa11.87□□□□□ -0.51
SPTBN1-202ENST00000356805 POLD3Q15054 466 aaPredicted RBP11.87□□□□□ -0.51
SPTBN1-202ENST00000356805 CCDC3Q9BQI4 270 aa11.87□□□□□ -0.51
SPTBN1-202ENST00000356805 LY9Q9HBG7 655 aa11.87□□□□□ -0.51
SPTBN1-202ENST00000356805 BARHL2Q9NY43 387 aa11.87□□□□□ -0.51
SPTBN1-202ENST00000356805 UBOX5O94941 541 aa11.87□□□□□ -0.51
SPTBN1-202ENST00000356805 ACADMP11310 421 aa11.87□□□□□ -0.51
SPTBN1-202ENST00000356805 NMT1P30419 496 aaKnown RBP11.87□□□□□ -0.51
SPTBN1-202ENST00000356805 SV2CQ496J9 727 aa11.87□□□□□ -0.51
SPTBN1-202ENST00000356805 CDH24Q86UP0 819 aa11.87□□□□□ -0.51
SPTBN1-202ENST00000356805 TFB1MQ8WVM0 346 aaKnown RBP11.87□□□□□ -0.51
SPTBN1-202ENST00000356805 MRPL48Q96GC5 212 aaKnown RBP11.87□□□□□ -0.51
SPTBN1-202ENST00000356805 ADI1Q9BV57 179 aa11.87□□□□□ -0.51
SPTBN1-202ENST00000356805 ZNF608Q9ULD9 1512 aaPredicted RBP11.87□□□□□ -0.51
SPTBN1-202ENST00000356805 SKAP2O75563 359 aaPredicted RBP11.87□□□□□ -0.51
SPTBN1-202ENST00000356805 DDI2Q5TDH0 399 aa11.87□□□□□ -0.51
SPTBN1-202ENST00000356805 TDRD10Q5VZ19 366 aaKnown RBP11.87□□□□□ -0.51
SPTBN1-202ENST00000356805 MACC1Q6ZN28 852 aa11.87□□□□□ -0.51
SPTBN1-202ENST00000356805 SVOPQ8N4V2 548 aa11.87□□□□□ -0.51
SPTBN1-202ENST00000356805 RTL3Q8N8U3 475 aaKnown RBP11.87□□□□□ -0.51
SPTBN1-202ENST00000356805 KAT2BQ92831 832 aa11.87□□□□□ -0.51
SPTBN1-202ENST00000356805 MYRFQ9Y2G1 1151 aa11.87□□□□□ -0.51
SPTBN1-202ENST00000356805 BAZ2BQ9UIF8 2168 aaKnown RBP11.87□□□□□ -0.51
SPTBN1-202ENST00000356805 TRIM43BA6NCK2 446 aa11.87□□□□□ -0.51
SPTBN1-202ENST00000356805 TSPAN9O75954 239 aa11.87□□□□□ -0.51
SPTBN1-202ENST00000356805 CPSF4O95639 269 aaKnown RBP11.87□□□□□ -0.51
SPTBN1-202ENST00000356805 ANXA11P50995 505 aaKnown RBP11.87□□□□□ -0.51
SPTBN1-202ENST00000356805 DGKKQ5KSL6 1271 aa11.87□□□□□ -0.51
SPTBN1-202ENST00000356805 KCNV1Q6PIU1 500 aa11.87□□□□□ -0.51
SPTBN1-202ENST00000356805 ARID3BQ8IVW6 561 aaPredicted RBP11.87□□□□□ -0.51
SPTBN1-202ENST00000356805 WDR36Q8NI36 951 aaKnown RBP11.87□□□□□ -0.51
SPTBN1-202ENST00000356805 DPF2Q92785 391 aa11.87□□□□□ -0.51
SPTBN1-202ENST00000356805 NARS2Q96I59 477 aaKnown RBP11.87□□□□□ -0.51
SPTBN1-202ENST00000356805 GOLPH3Q9H4A6 298 aa11.87□□□□□ -0.51
SPTBN1-202ENST00000356805 TIMMDC1Q9NPL8 285 aa11.87□□□□□ -0.51
SPTBN1-202ENST00000356805 HAO1Q9UJM8 370 aa11.87□□□□□ -0.51
SPTBN1-202ENST00000356805 TMCC3Q9ULS5 477 aa11.87□□□□□ -0.51
SPTBN1-202ENST00000356805 C2orf81A6NN90 581 aa11.87□□□□□ -0.51
SPTBN1-202ENST00000356805 PMPCBO75439 489 aa11.87□□□□□ -0.51
SPTBN1-202ENST00000356805 TDP2O95551 362 aa11.87□□□□□ -0.51
SPTBN1-202ENST00000356805 WEE2P0C1S8 567 aa11.87□□□□□ -0.51
SPTBN1-202ENST00000356805 VCLP18206 1134 aa11.87□□□□□ -0.51
SPTBN1-202ENST00000356805 PKN2Q16513 984 aaKnown RBP11.87□□□□□ -0.51
SPTBN1-202ENST00000356805 ARMC4Q5T2S8 1044 aa11.87□□□□□ -0.51
SPTBN1-202ENST00000356805 TYW3Q6IPR3 259 aaKnown RBP11.87□□□□□ -0.51
SPTBN1-202ENST00000356805 CAMKK1Q8N5S9 505 aa11.87□□□□□ -0.51
SPTBN1-202ENST00000356805 ATP4AP20648 1035 aa11.87□□□□□ -0.51
SPTBN1-202ENST00000356805 RGS21Q2M5E4 152 aa11.87□□□□□ -0.51
SPTBN1-202ENST00000356805 PRMT9Q6P2P2 845 aa11.87□□□□□ -0.51
SPTBN1-202ENST00000356805 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.87□□□□□ -0.51
SPTBN1-202ENST00000356805 SERHL2Q9H4I8 314 aa11.87□□□□□ -0.51
SPTBN1-202ENST00000356805 SERHLQ9NQF3 203 aa11.87□□□□□ -0.51
SPTBN1-202ENST00000356805 CYP39A1Q9NYL5 469 aa11.87□□□□□ -0.51
SPTBN1-202ENST00000356805 PRDX5P30044 214 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms