RNA–Protein interactions for RNA: ENST00000355947.6

TRIM4-203, Transcript of tripartite motif containing 4, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRIM4, Length 3,383 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-203ENST00000355947 RAB6CQ53S08 254 aa14.17□□□□□ -0.14
TRIM4-203ENST00000355947 CES3Q6UWW8 571 aa14.17□□□□□ -0.14
TRIM4-203ENST00000355947 RAB6CQ9H0N0 254 aa14.17□□□□□ -0.14
TRIM4-203ENST00000355947 AGO4Q9HCK5 861 aaKnown RBP14.17□□□□□ -0.14
TRIM4-203ENST00000355947 SEPT10Q9P0V9 454 aa14.17□□□□□ -0.14
TRIM4-203ENST00000355947 NOP56O00567 594 aaKnown RBP14.16□□□□□ -0.14
TRIM4-203ENST00000355947 IL1R2P27930 398 aa14.16□□□□□ -0.14
TRIM4-203ENST00000355947 SESN2P58004 480 aaPredicted RBP14.16□□□□□ -0.14
TRIM4-203ENST00000355947 DYNC1I2Q13409 638 aaKnown RBP14.16□□□□□ -0.14
TRIM4-203ENST00000355947 SH3PXD2AQ5TCZ1 1133 aa14.16□□□□□ -0.14
TRIM4-203ENST00000355947 OR6Y1Q8NGX8 325 aa14.16□□□□□ -0.14
TRIM4-203ENST00000355947 UBA3Q8TBC4 463 aa14.16□□□□□ -0.14
TRIM4-203ENST00000355947 PGLYRP2Q96PD5 576 aa14.16□□□□□ -0.14
TRIM4-203ENST00000355947 STAU2Q9NUL3 570 aaKnown RBP eCLIP14.16□□□□□ -0.14
TRIM4-203ENST00000355947 GALNT8Q9NY28 637 aa14.16□□□□□ -0.14
TRIM4-203ENST00000355947 TAGLN3Q9UI15 199 aa14.16□□□□□ -0.14
TRIM4-203ENST00000355947 PHLPP1O60346 1717 aa14.16□□□□□ -0.14
TRIM4-203ENST00000355947 SPATA31A6Q5VVP1 1343 aa14.16□□□□□ -0.14
TRIM4-203ENST00000355947 TM9SF1O15321 606 aa14.16□□□□□ -0.14
TRIM4-203ENST00000355947 TNFSF9P41273 254 aa14.16□□□□□ -0.14
TRIM4-203ENST00000355947 RGS7P49802 495 aa14.16□□□□□ -0.14
TRIM4-203ENST00000355947 ROR1Q01973 937 aa14.16□□□□□ -0.14
TRIM4-203ENST00000355947 GCNT1Q02742 428 aa14.16□□□□□ -0.14
TRIM4-203ENST00000355947 ATG16L1Q676U5 607 aa14.16□□□□□ -0.14
TRIM4-203ENST00000355947 IL31Q6EBC2 164 aa14.16□□□□□ -0.14
TRIM4-203ENST00000355947 TRMT10BQ6PF06 316 aaKnown RBP14.16□□□□□ -0.14
TRIM4-203ENST00000355947 GSDMBQ8TAX9 411 aa14.16□□□□□ -0.14
TRIM4-203ENST00000355947 UNKQ9C0B0 810 aaKnown RBP14.16□□□□□ -0.14
TRIM4-203ENST00000355947 APOBEC2Q9Y235 224 aaKnown RBP14.16□□□□□ -0.14
TRIM4-203ENST00000355947 COL22A1Q8NFW1 1626 aaPredicted RBP14.16□□□□□ -0.14
TRIM4-203ENST00000355947 A0A0B4J269 797 aa14.16□□□□□ -0.14
TRIM4-203ENST00000355947 ZBED1O96006 694 aa14.16□□□□□ -0.14
TRIM4-203ENST00000355947 CDKN2BP42772 138 aa14.16□□□□□ -0.14
TRIM4-203ENST00000355947 ZNF252P-AS1Q0IIN9 211 aa14.16□□□□□ -0.14
TRIM4-203ENST00000355947 ADGRD1Q6QNK2 874 aa14.16□□□□□ -0.14
TRIM4-203ENST00000355947 MAP4K3Q8IVH8 894 aa14.16□□□□□ -0.14
TRIM4-203ENST00000355947 ADAM32Q8TC27 787 aa14.16□□□□□ -0.14
TRIM4-203ENST00000355947 USP13Q92995 863 aaPredicted RBP14.16□□□□□ -0.14
TRIM4-203ENST00000355947 SKA1Q96BD8 255 aa14.16□□□□□ -0.14
TRIM4-203ENST00000355947 SMYD2Q9NRG4 433 aa14.16□□□□□ -0.14
TRIM4-203ENST00000355947 PLA2G4CQ9UP65 541 aa14.16□□□□□ -0.14
TRIM4-203ENST00000355947 DCXO43602 365 aa14.15□□□□□ -0.14
TRIM4-203ENST00000355947 PRKG1Q13976 671 aa14.15□□□□□ -0.14
TRIM4-203ENST00000355947 MARK2Q7KZI7 788 aaKnown RBP14.15□□□□□ -0.14
TRIM4-203ENST00000355947 FAM81AQ8TBF8 368 aa14.15□□□□□ -0.14
TRIM4-203ENST00000355947 WDR83Q9BRX9 315 aaKnown RBP14.15□□□□□ -0.14
TRIM4-203ENST00000355947 SPATA16Q9BXB7 569 aa14.15□□□□□ -0.14
TRIM4-203ENST00000355947 EFHC1Q5JVL4 640 aa14.15□□□□□ -0.14
TRIM4-203ENST00000355947 FAM102AQ5T9C2 384 aaPredicted RBP14.15□□□□□ -0.14
TRIM4-203ENST00000355947 WDR75Q8IWA0 830 aaKnown RBP14.15□□□□□ -0.14
TRIM4-203ENST00000355947 SP8Q8IXZ3 490 aa14.15□□□□□ -0.14
TRIM4-203ENST00000355947 GMCL1P1Q8NEA9 526 aa14.15□□□□□ -0.14
TRIM4-203ENST00000355947 ZNF711Q9Y462 761 aa14.15□□□□□ -0.14
TRIM4-203ENST00000355947 MYH9P35579 1960 aaKnown RBP14.15□□□□□ -0.14
TRIM4-203ENST00000355947 ZNF541Q9H0D2 1346 aa14.14□□□□□ -0.15
TRIM4-203ENST00000355947 TMEM191CA6NGB0 347 aa14.14□□□□□ -0.15
TRIM4-203ENST00000355947 XPO1O14980 1071 aaKnown RBP14.14□□□□□ -0.15
TRIM4-203ENST00000355947 HNRNPCL1O60812 293 aaKnown RBP14.14□□□□□ -0.15
TRIM4-203ENST00000355947 SNRPAP09012 282 aaKnown RBP14.14□□□□□ -0.15
TRIM4-203ENST00000355947 TMEM191BP0C7N4 346 aa14.14□□□□□ -0.15
TRIM4-203ENST00000355947 SERPINB5P36952 375 aa14.14□□□□□ -0.15
TRIM4-203ENST00000355947 GTF2A2P52657 109 aa14.14□□□□□ -0.15
TRIM4-203ENST00000355947 DPYSL3Q14195 570 aa14.14□□□□□ -0.15
TRIM4-203ENST00000355947 PRKD1Q15139 912 aaPredicted RBP14.14□□□□□ -0.15
TRIM4-203ENST00000355947 C15orf59Q2T9L4 293 aaPredicted RBP14.14□□□□□ -0.15
TRIM4-203ENST00000355947 RC3H1Q5TC82 1133 aaKnown RBP14.14□□□□□ -0.15
TRIM4-203ENST00000355947 OR6B2Q6IFH4 312 aa14.14□□□□□ -0.15
TRIM4-203ENST00000355947 DENND1BQ6P3S1 775 aa14.14□□□□□ -0.15
TRIM4-203ENST00000355947 ICA1LQ8NDH6 482 aa14.14□□□□□ -0.15
TRIM4-203ENST00000355947 GATA6Q92908 595 aa14.14□□□□□ -0.15
TRIM4-203ENST00000355947 MASTLQ96GX5 879 aa14.14□□□□□ -0.15
TRIM4-203ENST00000355947 ZDHHC15Q96MV8 337 aa14.14□□□□□ -0.15
TRIM4-203ENST00000355947 C20orf27Q9GZN8 174 aa14.14□□□□□ -0.15
TRIM4-203ENST00000355947 PNPOQ9NVS9 261 aa14.14□□□□□ -0.15
TRIM4-203ENST00000355947 TXNDC16Q9P2K2 825 aa14.14□□□□□ -0.15
TRIM4-203ENST00000355947 ZNRF3Q9ULT6 936 aa14.14□□□□□ -0.15
TRIM4-203ENST00000355947 RREB1Q92766 1687 aa14.14□□□□□ -0.15
TRIM4-203ENST00000355947 SIGLEC16A6NMB1 481 aa14.14□□□□□ -0.15
TRIM4-203ENST00000355947 VNN1O95497 513 aa14.14□□□□□ -0.15
TRIM4-203ENST00000355947 PKNOX1P55347 436 aa14.14□□□□□ -0.15
TRIM4-203ENST00000355947 PRKCEQ02156 737 aa14.14□□□□□ -0.15
TRIM4-203ENST00000355947 BAATQ14032 418 aaPredicted RBP14.14□□□□□ -0.15
TRIM4-203ENST00000355947 TRMT5Q32P41 509 aaKnown RBP14.14□□□□□ -0.15
TRIM4-203ENST00000355947 CIAPIN1Q6FI81 312 aa14.14□□□□□ -0.15
TRIM4-203ENST00000355947 TRAPPC9Q96Q05 1148 aa14.14□□□□□ -0.15
TRIM4-203ENST00000355947 FOXP3Q9BZS1 431 aa14.14□□□□□ -0.15
TRIM4-203ENST00000355947 RNPEPQ9H4A4 650 aa14.14□□□□□ -0.15
TRIM4-203ENST00000355947 CISHQ9NSE2 258 aa14.14□□□□□ -0.15
TRIM4-203ENST00000355947 POLIQ9UNA4 740 aa14.14□□□□□ -0.15
TRIM4-203ENST00000355947 ITM2AO43736 263 aa14.14□□□□□ -0.15
TRIM4-203ENST00000355947 ZNF862O60290 1169 aa14.14□□□□□ -0.15
TRIM4-203ENST00000355947 SOX11P35716 441 aa14.14□□□□□ -0.15
TRIM4-203ENST00000355947 MYBPC2Q14324 1141 aa14.14□□□□□ -0.15
TRIM4-203ENST00000355947 OASLQ15646 514 aaKnown RBP14.14□□□□□ -0.15
TRIM4-203ENST00000355947 LGSNQ5TDP6 509 aa14.14□□□□□ -0.15
TRIM4-203ENST00000355947 PLEKHA7Q6IQ23 1121 aa14.14□□□□□ -0.15
TRIM4-203ENST00000355947 RBM44Q6ZP01 1051 aaKnown RBP14.14□□□□□ -0.15
TRIM4-203ENST00000355947 ENOSF1Q7L5Y1 443 aa14.14□□□□□ -0.15
TRIM4-203ENST00000355947 TFAP2BQ92481 460 aa14.14□□□□□ -0.15
TRIM4-203ENST00000355947 PPP2R3CQ969Q6 453 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms