RNA–Protein interactions for RNA: ENST00000353047.10

CTSB-202, Transcript of cathepsin B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTSB, Length 3,875 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-202ENST00000353047 ZNF541Q9H0D2 1346 aa18.77■□□□□ 0.6
CTSB-202ENST00000353047 SP100P23497 879 aaPredicted RBP18.77■□□□□ 0.6
CTSB-202ENST00000353047 DPYSL3Q14195 570 aa18.77■□□□□ 0.6
CTSB-202ENST00000353047 RAB6CQ53S08 254 aa18.77■□□□□ 0.6
CTSB-202ENST00000353047 ST13P4Q8IZP2 240 aaPredicted RBP18.77■□□□□ 0.6
CTSB-202ENST00000353047 TTC13Q8NBP0 860 aa18.77■□□□□ 0.6
CTSB-202ENST00000353047 GCNAQ96QF7 691 aa18.77■□□□□ 0.6
CTSB-202ENST00000353047 RAB6CQ9H0N0 254 aa18.77■□□□□ 0.6
CTSB-202ENST00000353047 DDX56Q9NY93 547 aaKnown RBP18.77■□□□□ 0.6
CTSB-202ENST00000353047 ALOX15BO15296 676 aa18.77■□□□□ 0.6
CTSB-202ENST00000353047 DHX15O43143 795 aaKnown RBP18.77■□□□□ 0.6
CTSB-202ENST00000353047 SNUPNO95149 360 aaKnown RBP18.77■□□□□ 0.6
CTSB-202ENST00000353047 LRRC23Q53EV4 343 aaPredicted RBP18.77■□□□□ 0.6
CTSB-202ENST00000353047 LAYNQ6UX15 382 aa18.77■□□□□ 0.6
CTSB-202ENST00000353047 SCUBE3Q8IX30 993 aa18.77■□□□□ 0.6
CTSB-202ENST00000353047 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.77■□□□□ 0.62e-23■□□□□ 11.3
CTSB-202ENST00000353047 RXFP2Q8WXD0 754 aa18.77■□□□□ 0.6
CTSB-202ENST00000353047 MOCOSQ96EN8 888 aa18.77■□□□□ 0.6
CTSB-202ENST00000353047 FAM49AQ9H0Q0 323 aaPredicted RBP18.77■□□□□ 0.6
CTSB-202ENST00000353047 SHOC2Q9UQ13 582 aa18.77■□□□□ 0.6
CTSB-202ENST00000353047 LDHAP00338 332 aaKnown RBP18.76■□□□□ 0.59
CTSB-202ENST00000353047 IL1R2P27930 398 aa18.76■□□□□ 0.59
CTSB-202ENST00000353047 NME3Q13232 169 aa18.76■□□□□ 0.59
CTSB-202ENST00000353047 MED21Q13503 144 aa18.76■□□□□ 0.59
CTSB-202ENST00000353047 PTPN20Q4JDL3 420 aa18.76■□□□□ 0.59
CTSB-202ENST00000353047 PPP1R15BQ5SWA1 713 aa18.76■□□□□ 0.59
CTSB-202ENST00000353047 C12orf29Q8N999 325 aa18.76■□□□□ 0.59
CTSB-202ENST00000353047 RNF34Q969K3 372 aa18.76■□□□□ 0.59
CTSB-202ENST00000353047 MARK4Q96L34 752 aa18.76■□□□□ 0.59
CTSB-202ENST00000353047 CCDC134Q9H6E4 229 aa18.76■□□□□ 0.59
CTSB-202ENST00000353047 SLC24A2Q9UI40 661 aa18.76■□□□□ 0.59
CTSB-202ENST00000353047 LRCH1Q9Y2L9 728 aa18.76■□□□□ 0.59
CTSB-202ENST00000353047 HMGCRP04035 888 aa18.76■□□□□ 0.59
CTSB-202ENST00000353047 DEFB107AQ8IZN7 70 aa18.76■□□□□ 0.59
CTSB-202ENST00000353047 TNS4Q8IZW8 715 aa18.76■□□□□ 0.59
CTSB-202ENST00000353047 LRRC43Q8N309 656 aa18.76■□□□□ 0.59
CTSB-202ENST00000353047 XPNPEP1Q9NQW7 623 aa18.76■□□□□ 0.59
CTSB-202ENST00000353047 ASNSD1Q9NWL6 643 aa18.76■□□□□ 0.59
CTSB-202ENST00000353047 UBP1Q9NZI7 540 aa18.76■□□□□ 0.59
CTSB-202ENST00000353047 RABGEF1Q9UJ41 708 aa18.76■□□□□ 0.59
CTSB-202ENST00000353047 PLA2G4CQ9UP65 541 aa18.76■□□□□ 0.59
CTSB-202ENST00000353047 MYO18AQ92614 2054 aaKnown RBP18.76■□□□□ 0.59
CTSB-202ENST00000353047 H0YCG3 227 aa18.76■□□□□ 0.59
CTSB-202ENST00000353047 C2CD2LO14523 706 aa18.76■□□□□ 0.59
CTSB-202ENST00000353047 DCXO43602 365 aa18.76■□□□□ 0.59
CTSB-202ENST00000353047 T-ENOLP0DO92 83 aa18.76■□□□□ 0.59
CTSB-202ENST00000353047 SDC4P31431 198 aa18.76■□□□□ 0.59
CTSB-202ENST00000353047 RNASEH2BQ5TBB1 312 aaKnown RBP18.76■□□□□ 0.59
CTSB-202ENST00000353047 PAF1Q8N7H5 531 aa18.76■□□□□ 0.59
CTSB-202ENST00000353047 TMA16Q96EY4 203 aaKnown RBP18.76■□□□□ 0.59
CTSB-202ENST00000353047 CNBD2Q96M20 576 aa18.76■□□□□ 0.59
CTSB-202ENST00000353047 SNX9Q9Y5X1 595 aa18.76■□□□□ 0.59
CTSB-202ENST00000353047 PLIN4Q96Q06 1357 aa18.76■□□□□ 0.59
CTSB-202ENST00000353047 TMEM191CA6NGB0 347 aa18.75■□□□□ 0.59
CTSB-202ENST00000353047 B4GALT5O43286 388 aa18.75■□□□□ 0.59
CTSB-202ENST00000353047 MYBPC2Q14324 1141 aa18.75■□□□□ 0.59
CTSB-202ENST00000353047 RALGPS1Q5JS13 557 aa18.75■□□□□ 0.59
CTSB-202ENST00000353047 TRMT10BQ6PF06 316 aaKnown RBP18.75■□□□□ 0.59
CTSB-202ENST00000353047 C12orf50Q8NA57 414 aaPredicted RBP18.75■□□□□ 0.59
CTSB-202ENST00000353047 RNPEPQ9H4A4 650 aa18.75■□□□□ 0.59
CTSB-202ENST00000353047 YDJCA8MPS7 323 aa18.75■□□□□ 0.59
CTSB-202ENST00000353047 VNN1O95497 513 aa18.75■□□□□ 0.59
CTSB-202ENST00000353047 KDELR1P24390 212 aa18.75■□□□□ 0.59
CTSB-202ENST00000353047 SH2D4BQ5SQS7 431 aa18.75■□□□□ 0.59
CTSB-202ENST00000353047 WASHC2DQ5SRD0 308 aa18.75■□□□□ 0.59
CTSB-202ENST00000353047 RSBN1LQ6PCB5 846 aaPredicted RBP18.75■□□□□ 0.59
CTSB-202ENST00000353047 INPP5DQ92835 1189 aa18.75■□□□□ 0.59
CTSB-202ENST00000353047 ZNF184Q99676 751 aaPredicted RBP18.75■□□□□ 0.59
CTSB-202ENST00000353047 A0A1B0GUL6 1792 aa18.75■□□□□ 0.59
CTSB-202ENST00000353047 GRIA1P42261 906 aa18.75■□□□□ 0.59
CTSB-202ENST00000353047 DSG1Q02413 1049 aa18.75■□□□□ 0.59
CTSB-202ENST00000353047 ITGA9Q13797 1035 aa18.75■□□□□ 0.59
CTSB-202ENST00000353047 STXBP2Q15833 593 aa18.75■□□□□ 0.59
CTSB-202ENST00000353047 NBPF12Q5TAG4 269 aaPredicted RBP18.75■□□□□ 0.59
CTSB-202ENST00000353047 ZNF677Q86XU0 584 aa18.75■□□□□ 0.59
CTSB-202ENST00000353047 ADAM32Q8TC27 787 aa18.75■□□□□ 0.59
CTSB-202ENST00000353047 CDKL2Q92772 493 aa18.75■□□□□ 0.59
CTSB-202ENST00000353047 EXT2Q93063 718 aa18.75■□□□□ 0.59
CTSB-202ENST00000353047 CPXM1Q96SM3 734 aa18.75■□□□□ 0.59
CTSB-202ENST00000353047 SLC38A10Q9HBR0 1119 aa18.75■□□□□ 0.59
CTSB-202ENST00000353047 CLUHO75153 1309 aa18.75■□□□□ 0.59
CTSB-202ENST00000353047 NCKAP1LP55160 1127 aa18.75■□□□□ 0.59
CTSB-202ENST00000353047 C1QBPQ07021 282 aaKnown RBP18.75■□□□□ 0.59
CTSB-202ENST00000353047 PDE1CQ14123 709 aaPredicted RBP18.75■□□□□ 0.59
CTSB-202ENST00000353047 HEATR6Q6AI08 1181 aaKnown RBP18.75■□□□□ 0.59
CTSB-202ENST00000353047 CDHR3Q6ZTQ4 885 aa18.75■□□□□ 0.59
CTSB-202ENST00000353047 SH3TC2Q8TF17 1288 aa18.75■□□□□ 0.59
CTSB-202ENST00000353047 MRPL4Q9BYD3 311 aaKnown RBP18.75■□□□□ 0.59
CTSB-202ENST00000353047 ZNF536O15090 1300 aa18.74■□□□□ 0.59
CTSB-202ENST00000353047 CXorf49A8MYA2 514 aaPredicted RBP18.74■□□□□ 0.59
CTSB-202ENST00000353047 GARTP22102 1010 aa18.74■□□□□ 0.59
CTSB-202ENST00000353047 TFDP2Q14188 446 aa18.74■□□□□ 0.59
CTSB-202ENST00000353047 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP18.74■□□□□ 0.59
CTSB-202ENST00000353047 MAB21L3Q8N8X9 362 aa18.74■□□□□ 0.59
CTSB-202ENST00000353047 ANKLE1Q8NAG6 615 aa18.74■□□□□ 0.59
CTSB-202ENST00000353047 MIPOL1Q8TD10 442 aa18.74■□□□□ 0.59
CTSB-202ENST00000353047 CPB2Q96IY4 423 aa18.74■□□□□ 0.59
CTSB-202ENST00000353047 E5RJQ4 531 aa18.74■□□□□ 0.59
CTSB-202ENST00000353047 GRIN3BO60391 1043 aa18.74■□□□□ 0.59
CTSB-202ENST00000353047 LRCH4O75427 683 aa18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms