RNA–Protein interactions for RNA: ENST00000349748.7

CAPN3-203, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 2,955 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-203ENST00000349748 FYNP06241 537 aa11.07□□□□□ -0.64
CAPN3-203ENST00000349748 P4HA1P13674 534 aa11.07□□□□□ -0.64
CAPN3-203ENST00000349748 POLR2EP19388 210 aaKnown RBP11.07□□□□□ -0.64
CAPN3-203ENST00000349748 FGFR2P21802 821 aa11.07□□□□□ -0.64
CAPN3-203ENST00000349748 PRDX6P30041 224 aa11.07□□□□□ -0.64
CAPN3-203ENST00000349748 STAT3P40763 770 aa11.07□□□□□ -0.64
CAPN3-203ENST00000349748 NR4A2P43354 598 aa11.07□□□□□ -0.64
CAPN3-203ENST00000349748 ACADSBP45954 432 aa11.07□□□□□ -0.64
CAPN3-203ENST00000349748 BAG6P46379 1132 aa11.07□□□□□ -0.64
CAPN3-203ENST00000349748 PDIA2Q13087 525 aaKnown RBP11.07□□□□□ -0.64
CAPN3-203ENST00000349748 SELENBP1Q13228 472 aa11.07□□□□□ -0.64
CAPN3-203ENST00000349748 GRB10Q13322 594 aa11.07□□□□□ -0.64
CAPN3-203ENST00000349748 LETM2Q2VYF4 491 aa11.07□□□□□ -0.64
CAPN3-203ENST00000349748 KAZNQ674X7 775 aa11.07□□□□□ -0.64
CAPN3-203ENST00000349748 LRRC49Q8IUZ0 686 aa11.07□□□□□ -0.64
CAPN3-203ENST00000349748 RHOT2Q8IXI1 618 aa11.07□□□□□ -0.64
CAPN3-203ENST00000349748 UPF1Q92900 1129 aaKnown RBP eCLIP11.07□□□□□ -0.64
CAPN3-203ENST00000349748 DCPSQ96C86 337 aaKnown RBP11.07□□□□□ -0.64
CAPN3-203ENST00000349748 ZSCAN10Q96SZ4 725 aaPredicted RBP11.07□□□□□ -0.64
CAPN3-203ENST00000349748 TBC1D14Q9P2M4 693 aa11.07□□□□□ -0.64
CAPN3-203ENST00000349748 DAPK2Q9UIK4 370 aa11.07□□□□□ -0.64
CAPN3-203ENST00000349748 IFT52Q9Y366 437 aa11.07□□□□□ -0.64
CAPN3-203ENST00000349748 KMOO15229 486 aa11.07□□□□□ -0.64
CAPN3-203ENST00000349748 CYTH3O43739 400 aa11.07□□□□□ -0.64
CAPN3-203ENST00000349748 PROCP04070 461 aa11.07□□□□□ -0.64
CAPN3-203ENST00000349748 JAM2P57087 298 aa11.07□□□□□ -0.64
CAPN3-203ENST00000349748 PRKD1Q15139 912 aaPredicted RBP11.07□□□□□ -0.64
CAPN3-203ENST00000349748 PFKFB3Q16875 520 aaPredicted RBP11.07□□□□□ -0.64
CAPN3-203ENST00000349748 ERFEQ4G0M1 354 aa11.07□□□□□ -0.64
CAPN3-203ENST00000349748 KCNK18Q7Z418 384 aa11.07□□□□□ -0.64
CAPN3-203ENST00000349748 GRK7Q8WTQ7 553 aa11.07□□□□□ -0.64
CAPN3-203ENST00000349748 LARP4BQ92615 738 aaKnown RBP11.07□□□□□ -0.64
CAPN3-203ENST00000349748 TANKQ92844 425 aa11.07□□□□□ -0.64
CAPN3-203ENST00000349748 SGF29Q96ES7 293 aa11.07□□□□□ -0.64
CAPN3-203ENST00000349748 CALML4Q96GE6 196 aa11.07□□□□□ -0.64
CAPN3-203ENST00000349748 LRRC19Q9H756 370 aa11.07□□□□□ -0.64
CAPN3-203ENST00000349748 RNF11Q9Y3C5 154 aa11.07□□□□□ -0.64
CAPN3-203ENST00000349748 ARHGAP33O14559 1287 aa11.06□□□□□ -0.64
CAPN3-203ENST00000349748 NMT2O60551 498 aa11.06□□□□□ -0.64
CAPN3-203ENST00000349748 CCNT2O60583 730 aaKnown RBP11.06□□□□□ -0.64
CAPN3-203ENST00000349748 ESRRBO95718 433 aa11.06□□□□□ -0.64
CAPN3-203ENST00000349748 CRYZL1O95825 349 aa11.06□□□□□ -0.64
CAPN3-203ENST00000349748 ABCB1P08183 1280 aaPredicted RBP11.06□□□□□ -0.64
CAPN3-203ENST00000349748 OR52Z1P0C646 297 aa11.06□□□□□ -0.64
CAPN3-203ENST00000349748 TUBA4AP68366 448 aa11.06□□□□□ -0.64
CAPN3-203ENST00000349748 PERM1Q5SV97 790 aa11.06□□□□□ -0.64
CAPN3-203ENST00000349748 FAM91A1Q658Y4 838 aa11.06□□□□□ -0.64
CAPN3-203ENST00000349748 SETD3Q86TU7 594 aaPredicted RBP11.06□□□□□ -0.64
CAPN3-203ENST00000349748 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.06□□□□□ -0.64
CAPN3-203ENST00000349748 CEP63Q96MT8 703 aa11.06□□□□□ -0.64
CAPN3-203ENST00000349748 FERMT1Q9BQL6 677 aa11.06□□□□□ -0.64
CAPN3-203ENST00000349748 ZBED2Q9BTP6 218 aa11.06□□□□□ -0.64
CAPN3-203ENST00000349748 UNKQ9C0B0 810 aaKnown RBP11.06□□□□□ -0.64
CAPN3-203ENST00000349748 TP63Q9H3D4 680 aaPredicted RBP11.06□□□□□ -0.64
CAPN3-203ENST00000349748 SIX2Q9NPC8 291 aa11.06□□□□□ -0.64
CAPN3-203ENST00000349748 TYW1Q9NV66 732 aaKnown RBP11.06□□□□□ -0.64
CAPN3-203ENST00000349748 GNPTGQ9UJJ9 305 aa11.06□□□□□ -0.64
CAPN3-203ENST00000349748 SF3B1O75533 1304 aaKnown RBP eCLIP11.06□□□□□ -0.64
CAPN3-203ENST00000349748 SBF2Q86WG5 1849 aa11.06□□□□□ -0.64
CAPN3-203ENST00000349748 CYP2D7A0A087X1C5 515 aa11.06□□□□□ -0.64
CAPN3-203ENST00000349748 MIF4GDA9UHW6 222 aaKnown RBP11.06□□□□□ -0.64
CAPN3-203ENST00000349748 CCNT1O60563 726 aaKnown RBP11.06□□□□□ -0.64
CAPN3-203ENST00000349748 TBCAO75347 108 aaKnown RBP11.06□□□□□ -0.64
CAPN3-203ENST00000349748 GMNNO75496 209 aa11.06□□□□□ -0.64
CAPN3-203ENST00000349748 GGPS1O95749 300 aa11.06□□□□□ -0.64
CAPN3-203ENST00000349748 GLULP15104 373 aa11.06□□□□□ -0.64
CAPN3-203ENST00000349748 GABRB3P28472 473 aa11.06□□□□□ -0.64
CAPN3-203ENST00000349748 ARL1P40616 181 aaPredicted RBP11.06□□□□□ -0.64
CAPN3-203ENST00000349748 CASP5P51878 434 aa11.06□□□□□ -0.64
CAPN3-203ENST00000349748 MAPK10P53779 464 aa11.06□□□□□ -0.64
CAPN3-203ENST00000349748 IRX4P78413 519 aa11.06□□□□□ -0.64
CAPN3-203ENST00000349748 OTUD4Q01804 1114 aaKnown RBP11.06□□□□□ -0.64
CAPN3-203ENST00000349748 COASYQ13057 564 aa11.06□□□□□ -0.64
CAPN3-203ENST00000349748 CARTPTQ16568 116 aa11.06□□□□□ -0.64
CAPN3-203ENST00000349748 IZUMO3Q5VZ72 239 aa11.06□□□□□ -0.64
CAPN3-203ENST00000349748 DENND5BQ6ZUT9 1274 aa11.06□□□□□ -0.64
CAPN3-203ENST00000349748 ADGRA1Q86SQ6 560 aa11.06□□□□□ -0.64
CAPN3-203ENST00000349748 ARID3BQ8IVW6 561 aaPredicted RBP11.06□□□□□ -0.64
CAPN3-203ENST00000349748 HCAR2Q8TDS4 363 aa11.06□□□□□ -0.64
CAPN3-203ENST00000349748 SNX29Q8TEQ0 813 aa11.06□□□□□ -0.64
CAPN3-203ENST00000349748 CFAP57Q96MR6 1250 aa11.06□□□□□ -0.64
CAPN3-203ENST00000349748 RILPQ96NA2 401 aa11.06□□□□□ -0.64
CAPN3-203ENST00000349748 UIMC1Q96RL1 719 aa11.06□□□□□ -0.64
CAPN3-203ENST00000349748 CCDC106Q9BWC9 280 aa11.06□□□□□ -0.64
CAPN3-203ENST00000349748 SENP1Q9P0U3 644 aa11.06□□□□□ -0.64
CAPN3-203ENST00000349748 CDH22Q9UJ99 828 aa11.06□□□□□ -0.64
CAPN3-203ENST00000349748 PCDHA6Q9UN73 950 aa11.06□□□□□ -0.64
CAPN3-203ENST00000349748 PCDHA8Q9Y5H6 950 aa11.06□□□□□ -0.64
CAPN3-203ENST00000349748 CLOCKO15516 846 aa11.05□□□□□ -0.64
CAPN3-203ENST00000349748 GABBR2O75899 941 aa11.05□□□□□ -0.64
CAPN3-203ENST00000349748 UQCRFS1P1P0C7P4 283 aa11.05□□□□□ -0.64
CAPN3-203ENST00000349748 STAT1P42224 750 aa11.05□□□□□ -0.64
CAPN3-203ENST00000349748 NFIXQ14938 502 aa11.05□□□□□ -0.64
CAPN3-203ENST00000349748 PUM3Q15397 648 aaKnown RBP11.05□□□□□ -0.64
CAPN3-203ENST00000349748 HERC4Q5GLZ8 1057 aaPredicted RBP11.05□□□□□ -0.64
CAPN3-203ENST00000349748 TTC23LQ6PF05 361 aa11.05□□□□□ -0.64
CAPN3-203ENST00000349748 GPR141Q7Z602 305 aa11.05□□□□□ -0.64
CAPN3-203ENST00000349748 BTLAQ7Z6A9 289 aa11.05□□□□□ -0.64
CAPN3-203ENST00000349748 KBTBD6Q86V97 674 aa11.05□□□□□ -0.64
CAPN3-203ENST00000349748 SNX29P2Q8IUI4 249 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms