RNA–Protein interactions for RNA: ENST00000339397.4

SRFBP1-201, Transcript of serum response factor binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRFBP1, Length 2,855 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRFBP1-201ENST00000339397 ARHGAP17Q68EM7 881 aa7.75□□□□□ -1.17
SRFBP1-201ENST00000339397 CD300LGQ6UXG3 332 aa7.75□□□□□ -1.17
SRFBP1-201ENST00000339397 SH3TC2Q8TF17 1288 aa7.75□□□□□ -1.17
SRFBP1-201ENST00000339397 ZNF560Q96MR9 790 aa7.75□□□□□ -1.17
SRFBP1-201ENST00000339397 PABPC3Q9H361 631 aaKnown RBP7.75□□□□□ -1.17
SRFBP1-201ENST00000339397 TMBIM4Q9HC24 238 aa7.75□□□□□ -1.17
SRFBP1-201ENST00000339397 MFHAS1Q9Y4C4 1052 aa7.75□□□□□ -1.17
SRFBP1-201ENST00000339397 TET1Q8NFU7 2136 aa7.75□□□□□ -1.17
SRFBP1-201ENST00000339397 UNC80Q8N2C7 3258 aa7.75□□□□□ -1.17
SRFBP1-201ENST00000339397 PDCD11Q14690 1871 aaKnown RBP7.74□□□□□ -1.17
SRFBP1-201ENST00000339397 BPTFQ12830 3046 aa7.74□□□□□ -1.17
SRFBP1-201ENST00000339397 A0A0U1RQF3 1178 aa7.74□□□□□ -1.17
SRFBP1-201ENST00000339397 SGK1O00141 431 aa7.74□□□□□ -1.17
SRFBP1-201ENST00000339397 NRP1O14786 923 aa7.74□□□□□ -1.17
SRFBP1-201ENST00000339397 OPA1O60313 960 aa7.74□□□□□ -1.17
SRFBP1-201ENST00000339397 INHAP05111 366 aa7.74□□□□□ -1.17
SRFBP1-201ENST00000339397 CKBP12277 381 aa7.74□□□□□ -1.17
SRFBP1-201ENST00000339397 CAPN2P17655 700 aa7.74□□□□□ -1.17
SRFBP1-201ENST00000339397 NKX3-2P78367 333 aa7.74□□□□□ -1.17
SRFBP1-201ENST00000339397 GUCY1A3Q02108 690 aa7.74□□□□□ -1.17
SRFBP1-201ENST00000339397 BST2Q10589 180 aaKnown RBP7.74□□□□□ -1.17
SRFBP1-201ENST00000339397 GPS1Q13098 491 aa7.74□□□□□ -1.17
SRFBP1-201ENST00000339397 CALCOCO2Q13137 446 aa7.74□□□□□ -1.17
SRFBP1-201ENST00000339397 DPYSL3Q14195 570 aa7.74□□□□□ -1.17
SRFBP1-201ENST00000339397 FASTKD3Q14CZ7 662 aaKnown RBP7.74□□□□□ -1.17
SRFBP1-201ENST00000339397 HADHQ16836 314 aaKnown RBP7.74□□□□□ -1.17
SRFBP1-201ENST00000339397 PPP6R3Q5H9R7 873 aaPredicted RBP7.74□□□□□ -1.17
SRFBP1-201ENST00000339397 SYPL2Q5VXT5 272 aa7.74□□□□□ -1.17
SRFBP1-201ENST00000339397 C1orf228Q6PIY5 440 aa7.74□□□□□ -1.17
SRFBP1-201ENST00000339397 CLEC20AQ6ZU45 233 aa7.74□□□□□ -1.17
SRFBP1-201ENST00000339397 ZNF365Q70YC5 407 aa7.74□□□□□ -1.17
SRFBP1-201ENST00000339397 POLNQ7Z5Q5 900 aa7.74□□□□□ -1.17
SRFBP1-201ENST00000339397 ZNF280BQ86YH2 543 aa7.74□□□□□ -1.17
SRFBP1-201ENST00000339397 RFX6Q8HWS3 928 aa7.74□□□□□ -1.17
SRFBP1-201ENST00000339397 CCDC185Q8N715 623 aa7.74□□□□□ -1.17
SRFBP1-201ENST00000339397 STKLD1Q8NE28 680 aa7.74□□□□□ -1.17
SRFBP1-201ENST00000339397 FAM76AQ8TAV0 307 aa7.74□□□□□ -1.17
SRFBP1-201ENST00000339397 ADAM32Q8TC27 787 aa7.74□□□□□ -1.17
SRFBP1-201ENST00000339397 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP7.74□□□□□ -1.17
SRFBP1-201ENST00000339397 EXOC4Q96A65 974 aa7.74□□□□□ -1.17
SRFBP1-201ENST00000339397 FAM149B1Q96BN6 582 aa7.74□□□□□ -1.17
SRFBP1-201ENST00000339397 SNF8Q96H20 258 aa7.74□□□□□ -1.17
SRFBP1-201ENST00000339397 PCED1BQ96HM7 432 aa7.74□□□□□ -1.17
SRFBP1-201ENST00000339397 PKNOX2Q96KN3 472 aa7.74□□□□□ -1.17
SRFBP1-201ENST00000339397 C9orf72Q96LT7 481 aa7.74□□□□□ -1.17
SRFBP1-201ENST00000339397 RTP3Q9BQQ7 232 aa7.74□□□□□ -1.17
SRFBP1-201ENST00000339397 CDC42EP4Q9H3Q1 356 aaKnown RBP7.74□□□□□ -1.17
SRFBP1-201ENST00000339397 ASNSD1Q9NWL6 643 aa7.74□□□□□ -1.17
SRFBP1-201ENST00000339397 TCRBV7S3A2A0A539 114 aa7.74□□□□□ -1.17
SRFBP1-201ENST00000339397 XPOTO43592 962 aaKnown RBP7.74□□□□□ -1.17
SRFBP1-201ENST00000339397 PRPSAP2O60256 369 aa7.74□□□□□ -1.17
SRFBP1-201ENST00000339397 GAS8O95995 478 aa7.74□□□□□ -1.17
SRFBP1-201ENST00000339397 KRT7P08729 469 aa7.74□□□□□ -1.17
SRFBP1-201ENST00000339397 ATF2P15336 505 aa7.74□□□□□ -1.17
SRFBP1-201ENST00000339397 BCAT1P54687 386 aa7.74□□□□□ -1.17
SRFBP1-201ENST00000339397 IFI35P80217 286 aaPredicted RBP7.74□□□□□ -1.17
SRFBP1-201ENST00000339397 DSC3Q14574 896 aa7.74□□□□□ -1.17
SRFBP1-201ENST00000339397 TRAF7Q6Q0C0 670 aa7.74□□□□□ -1.17
SRFBP1-201ENST00000339397 RNF180Q86T96 592 aa7.74□□□□□ -1.17
SRFBP1-201ENST00000339397 LRRTM3Q86VH5 581 aa7.74□□□□□ -1.17
SRFBP1-201ENST00000339397 ALLCQ8N6M5 410 aa7.74□□□□□ -1.17
SRFBP1-201ENST00000339397 FAM71DQ8N9W8 422 aa7.74□□□□□ -1.17
SRFBP1-201ENST00000339397 ZMIZ2Q8NF64 920 aa7.74□□□□□ -1.17
SRFBP1-201ENST00000339397 SLC35B2Q8TB61 432 aa7.74□□□□□ -1.17
SRFBP1-201ENST00000339397 EPS8L3Q8TE67 593 aaKnown RBP7.74□□□□□ -1.17
SRFBP1-201ENST00000339397 ZNF296Q8WUU4 475 aaPredicted RBP7.74□□□□□ -1.17
SRFBP1-201ENST00000339397 TBCBQ99426 244 aa7.74□□□□□ -1.17
SRFBP1-201ENST00000339397 SNRNP25Q9BV90 132 aaKnown RBP7.74□□□□□ -1.17
SRFBP1-201ENST00000339397 RSAD1Q9HA92 442 aa7.74□□□□□ -1.17
SRFBP1-201ENST00000339397 TMLHEQ9NVH6 421 aa7.74□□□□□ -1.17
SRFBP1-201ENST00000339397 DDX56Q9NY93 547 aaKnown RBP7.74□□□□□ -1.17
SRFBP1-201ENST00000339397 HCSTQ9UBK5 93 aa7.74□□□□□ -1.17
SRFBP1-201ENST00000339397 ANAPC5Q9UJX4 755 aa7.74□□□□□ -1.17
SRFBP1-201ENST00000339397 NOVA2Q9UNW9 492 aaKnown RBP7.74□□□□□ -1.17
SRFBP1-201ENST00000339397 RALGAPA2Q2PPJ7 1873 aa7.74□□□□□ -1.17
SRFBP1-201ENST00000339397 RIPK2O43353 540 aa7.73□□□□□ -1.17
SRFBP1-201ENST00000339397 MYZAPP0CAP1 466 aa7.73□□□□□ -1.17
SRFBP1-201ENST00000339397 WARSP23381 471 aaKnown RBP7.73□□□□□ -1.17
SRFBP1-201ENST00000339397 SDC4P31431 198 aa7.73□□□□□ -1.17
SRFBP1-201ENST00000339397 PNPLA4P41247 253 aa7.73□□□□□ -1.17
SRFBP1-201ENST00000339397 VCPP55072 806 aaKnown RBP7.73□□□□□ -1.17
SRFBP1-201ENST00000339397 ADCY1Q08828 1119 aa7.73□□□□□ -1.17
SRFBP1-201ENST00000339397 TAZQ16635 292 aa7.73□□□□□ -1.17
SRFBP1-201ENST00000339397 LONRF1Q17RB8 773 aa7.73□□□□□ -1.17
SRFBP1-201ENST00000339397 KRT71Q3SY84 523 aa7.73□□□□□ -1.17
SRFBP1-201ENST00000339397 CCDC38Q502W7 563 aa7.73□□□□□ -1.17
SRFBP1-201ENST00000339397 DCAF6Q58WW2 860 aa7.73□□□□□ -1.17
SRFBP1-201ENST00000339397 ANKRD22Q5VYY1 191 aa7.73□□□□□ -1.17
SRFBP1-201ENST00000339397 IZUMO3Q5VZ72 239 aa7.73□□□□□ -1.17
SRFBP1-201ENST00000339397 DSTYKQ6XUX3 929 aa7.73□□□□□ -1.17
SRFBP1-201ENST00000339397 RPAINQ86UA6 219 aa7.73□□□□□ -1.17
SRFBP1-201ENST00000339397 FAM131BQ86XD5 332 aa7.73□□□□□ -1.17
SRFBP1-201ENST00000339397 TOP6BLQ8N6T0 577 aa7.73□□□□□ -1.17
SRFBP1-201ENST00000339397 PQLC3Q8N755 202 aa7.73□□□□□ -1.17
SRFBP1-201ENST00000339397 MAIP1Q8WWC4 291 aa7.73□□□□□ -1.17
SRFBP1-201ENST00000339397 LINC01599Q8WXQ3 324 aa7.73□□□□□ -1.17
SRFBP1-201ENST00000339397 ATP6V1G3Q96LB4 118 aa7.73□□□□□ -1.17
SRFBP1-201ENST00000339397 SMOQ99835 787 aa7.73□□□□□ -1.17
SRFBP1-201ENST00000339397 MED10Q9BTT4 135 aa7.73□□□□□ -1.17
SRFBP1-201ENST00000339397 DUSP16Q9BY84 665 aa7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms