RNA–Protein interactions for RNA: ENST00000338546.9

HPS1-202, Transcript of HPS1, biogenesis of lysosomal organelles complex 3 subunit 1, humanhuman

TSL 1 (best) BASIC

Gene HPS1, Length 1,580 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1-202ENST00000338546 B3GNT5Q9BYG0 378 aa17.01■□□□□ 0.31
HPS1-202ENST00000338546 PRDM16Q9HAZ2 1276 aa17.01■□□□□ 0.31
HPS1-202ENST00000338546 LRRC4Q9HBW1 653 aa17.01■□□□□ 0.31
HPS1-202ENST00000338546 KLHL11Q9NVR0 708 aa17.01■□□□□ 0.31
HPS1-202ENST00000338546 TMEM161AQ9NX61 479 aa17.01■□□□□ 0.31
HPS1-202ENST00000338546 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP17.01■□□□□ 0.31
HPS1-202ENST00000338546 PCSK1NQ9UHG2 260 aa17.01■□□□□ 0.31
HPS1-202ENST00000338546 OGDHLQ9ULD0 1010 aa17.01■□□□□ 0.31
HPS1-202ENST00000338546 PTPN22Q9Y2R2 807 aa17.01■□□□□ 0.31
HPS1-202ENST00000338546 GOLGA8KD6RF30 607 aa17■□□□□ 0.31
HPS1-202ENST00000338546 PIK3R2O00459 728 aa17■□□□□ 0.31
HPS1-202ENST00000338546 LCP1P13796 627 aa17■□□□□ 0.31
HPS1-202ENST00000338546 ACAT1P24752 427 aaKnown RBP17■□□□□ 0.31
HPS1-202ENST00000338546 MATKP42679 507 aa17■□□□□ 0.31
HPS1-202ENST00000338546 MRPS5P82675 430 aaKnown RBP17■□□□□ 0.31
HPS1-202ENST00000338546 LLGL1Q15334 1064 aa17■□□□□ 0.31
HPS1-202ENST00000338546 TAF5Q15542 800 aa17■□□□□ 0.31
HPS1-202ENST00000338546 NOMO2Q5JPE7 1267 aa17■□□□□ 0.31
HPS1-202ENST00000338546 KCNT1Q5JUK3 1230 aa17■□□□□ 0.31
HPS1-202ENST00000338546 KIAA0319Q5VV43 1072 aa17■□□□□ 0.31
HPS1-202ENST00000338546 KAZNQ674X7 775 aa17■□□□□ 0.31
HPS1-202ENST00000338546 CEP128Q6ZU80 1094 aa17■□□□□ 0.31
HPS1-202ENST00000338546 CYP4V2Q6ZWL3 525 aaPredicted RBP17■□□□□ 0.31
HPS1-202ENST00000338546 PSTKQ8IV42 348 aaKnown RBP17■□□□□ 0.31
HPS1-202ENST00000338546 SLC35B2Q8TB61 432 aa17■□□□□ 0.31
HPS1-202ENST00000338546 SMARCD1Q96GM5 515 aa17■□□□□ 0.31
HPS1-202ENST00000338546 CCDC114Q96M63 670 aa17■□□□□ 0.31
HPS1-202ENST00000338546 FOXP3Q9BZS1 431 aa17■□□□□ 0.31
HPS1-202ENST00000338546 UNC93B1Q9H1C4 597 aa17■□□□□ 0.31
HPS1-202ENST00000338546 CSNK1G1Q9HCP0 422 aa17■□□□□ 0.31
HPS1-202ENST00000338546 CNGB3Q9NQW8 809 aa17■□□□□ 0.31
HPS1-202ENST00000338546 PCDHB8Q9UN66 801 aa17■□□□□ 0.31
HPS1-202ENST00000338546 INPP5FQ9Y2H2 1132 aa17■□□□□ 0.31
HPS1-202ENST00000338546 DAB1O75553 588 aa16.99■□□□□ 0.31
HPS1-202ENST00000338546 GRAP2O75791 330 aa16.99■□□□□ 0.31
HPS1-202ENST00000338546 IVDP26440 423 aa16.99■□□□□ 0.31
HPS1-202ENST00000338546 HSD17B3P37058 310 aa16.99■□□□□ 0.31
HPS1-202ENST00000338546 DHX9Q08211 1270 aaKnown RBP16.99■□□□□ 0.31
HPS1-202ENST00000338546 ADCY2Q08462 1091 aa16.99■□□□□ 0.31
HPS1-202ENST00000338546 ADCY1Q08828 1119 aa16.99■□□□□ 0.31
HPS1-202ENST00000338546 OASLQ15646 514 aaKnown RBP16.99■□□□□ 0.31
HPS1-202ENST00000338546 C15orf59Q2T9L4 293 aaPredicted RBP16.99■□□□□ 0.31
HPS1-202ENST00000338546 SMTNL2Q2TAL5 461 aa16.99■□□□□ 0.31
HPS1-202ENST00000338546 PLEKHG4Q58EX7 1191 aa16.99■□□□□ 0.31
HPS1-202ENST00000338546 INTS6LQ5JSJ4 861 aaKnown RBP16.99■□□□□ 0.31
HPS1-202ENST00000338546 RAB41Q5JT25 222 aa16.99■□□□□ 0.31
HPS1-202ENST00000338546 FAM35AQ86V20 835 aa16.99■□□□□ 0.31
HPS1-202ENST00000338546 SIX6OS1Q8N1H7 587 aa16.99■□□□□ 0.31
HPS1-202ENST00000338546 SCML4Q8N228 414 aa16.99■□□□□ 0.31
HPS1-202ENST00000338546 ALLCQ8N6M5 410 aa16.99■□□□□ 0.31
HPS1-202ENST00000338546 FBXO25Q8TCJ0 367 aa16.99■□□□□ 0.31
HPS1-202ENST00000338546 LINC01599Q8WXQ3 324 aa16.99■□□□□ 0.31
HPS1-202ENST00000338546 PIK3R5Q8WYR1 880 aa16.99■□□□□ 0.31
HPS1-202ENST00000338546 PCED1BQ96HM7 432 aa16.99■□□□□ 0.31
HPS1-202ENST00000338546 CFAP57Q96MR6 1250 aa16.99■□□□□ 0.31
HPS1-202ENST00000338546 ZIM3Q96PE6 472 aa16.99■□□□□ 0.31
HPS1-202ENST00000338546 PEBP4Q96S96 227 aa16.99■□□□□ 0.31
HPS1-202ENST00000338546 PAAF1Q9BRP4 392 aa16.99■□□□□ 0.31
HPS1-202ENST00000338546 BEGAINQ9BUH8 593 aa16.99■□□□□ 0.31
HPS1-202ENST00000338546 MAK16Q9BXY0 300 aaKnown RBP16.99■□□□□ 0.31
HPS1-202ENST00000338546 PNPLA8Q9NP80 782 aa16.99■□□□□ 0.31
HPS1-202ENST00000338546 ASIC3Q9UHC3 531 aa16.99■□□□□ 0.31
HPS1-202ENST00000338546 MYBPHLA2RUH7 354 aa16.98■□□□□ 0.31
HPS1-202ENST00000338546 APOC4-APOC2K7ER74 178 aa16.98■□□□□ 0.31
HPS1-202ENST00000338546 CST8O60676 142 aa16.98■□□□□ 0.31
HPS1-202ENST00000338546 AP1G2O75843 785 aa16.98■□□□□ 0.31
HPS1-202ENST00000338546 APOC2P02655 101 aa16.98■□□□□ 0.31
HPS1-202ENST00000338546 ATF2P15336 505 aa16.98■□□□□ 0.31
HPS1-202ENST00000338546 IGFBP6P24592 240 aaPredicted RBP16.98■□□□□ 0.31
HPS1-202ENST00000338546 KLRC2P26717 231 aa16.98■□□□□ 0.31
HPS1-202ENST00000338546 NOS2P35228 1153 aa16.98■□□□□ 0.31
HPS1-202ENST00000338546 CDH6P55285 790 aa16.98■□□□□ 0.31
HPS1-202ENST00000338546 EIF3BP55884 814 aaKnown RBP16.98■□□□□ 0.31
HPS1-202ENST00000338546 HDAC4P56524 1084 aa16.98■□□□□ 0.31
HPS1-202ENST00000338546 YWHAZP63104 245 aaKnown RBP16.98■□□□□ 0.31
HPS1-202ENST00000338546 SLC25A52Q3SY17 297 aa16.98■□□□□ 0.31
HPS1-202ENST00000338546 SH3TC2Q8TF17 1288 aa16.98■□□□□ 0.31
HPS1-202ENST00000338546 HSPH1Q92598 858 aa16.98■□□□□ 0.31
HPS1-202ENST00000338546 SEPT8Q92599 483 aa16.98■□□□□ 0.31
HPS1-202ENST00000338546 NT5C3BQ969T7 300 aa16.98■□□□□ 0.31
HPS1-202ENST00000338546 RTP3Q9BQQ7 232 aa16.98■□□□□ 0.31
HPS1-202ENST00000338546 NGRNQ9NPE2 291 aaKnown RBP16.98■□□□□ 0.31
HPS1-202ENST00000338546 KRT82Q9NSB4 513 aa16.98■□□□□ 0.31
HPS1-202ENST00000338546 STAU2Q9NUL3 570 aaKnown RBP eCLIP16.98■□□□□ 0.31
HPS1-202ENST00000338546 RRN3Q9NYV6 651 aa16.98■□□□□ 0.31
HPS1-202ENST00000338546 CACNG4Q9UBN1 327 aa16.98■□□□□ 0.31
HPS1-202ENST00000338546 DNPEPQ9ULA0 475 aa16.98■□□□□ 0.31
HPS1-202ENST00000338546 ZNF148Q9UQR1 794 aa16.98■□□□□ 0.31
HPS1-202ENST00000338546 TSC2P49815 1807 aa16.98■□□□□ 0.31
HPS1-202ENST00000338546 CLDN5O00501 218 aa16.98■□□□□ 0.31
HPS1-202ENST00000338546 TRAPPC3O43617 180 aa16.98■□□□□ 0.31
HPS1-202ENST00000338546 KRT14P02533 472 aa16.98■□□□□ 0.31
HPS1-202ENST00000338546 RARGP13631 454 aa16.98■□□□□ 0.31
HPS1-202ENST00000338546 ADCY8P40145 1251 aa16.98■□□□□ 0.31
HPS1-202ENST00000338546 ATP11AP98196 1134 aa16.98■□□□□ 0.31
HPS1-202ENST00000338546 ADIGQ0VDE8 80 aa16.98■□□□□ 0.31
HPS1-202ENST00000338546 CLLU1OSQ5K130 101 aa16.98■□□□□ 0.31
HPS1-202ENST00000338546 ERMARDQ5T6L9 678 aa16.98■□□□□ 0.31
HPS1-202ENST00000338546 SH3PXD2AQ5TCZ1 1133 aa16.98■□□□□ 0.31
HPS1-202ENST00000338546 OVOS1Q6IE37 1185 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms