RNA–Protein interactions for RNA: ENST00000334136.9

HDAC6-201, Transcript of histone deacetylase 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC6, Length 4,190 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-201ENST00000334136 PDIK1LQ8N165 341 aa12.31□□□□□ -0.44
HDAC6-201ENST00000334136 TPCN2Q8NHX9 752 aa12.31□□□□□ -0.44
HDAC6-201ENST00000334136 CAVIN3Q969G5 261 aa12.31□□□□□ -0.44
HDAC6-201ENST00000334136 C18orf8Q96DM3 657 aa12.31□□□□□ -0.44
HDAC6-201ENST00000334136 STAMBPL1Q96FJ0 436 aa12.31□□□□□ -0.44
HDAC6-201ENST00000334136 CALR3Q96L12 384 aaKnown RBP12.31□□□□□ -0.44
HDAC6-201ENST00000334136 MFSD14AQ96MC6 490 aa12.31□□□□□ -0.44
HDAC6-201ENST00000334136 OSGEPQ9NPF4 335 aa12.31□□□□□ -0.44
HDAC6-201ENST00000334136 DDX43Q9NXZ2 648 aaKnown RBP12.31□□□□□ -0.44
HDAC6-201ENST00000334136 KIAA1257Q9ULG3 409 aa12.31□□□□□ -0.44
HDAC6-201ENST00000334136 MYH7BA7E2Y1 1941 aa12.31□□□□□ -0.44
HDAC6-201ENST00000334136 HAUS5O94927 633 aa12.31□□□□□ -0.44
HDAC6-201ENST00000334136 FAM200BP0CF97 657 aa12.31□□□□□ -0.44
HDAC6-201ENST00000334136 EPHB1P54762 984 aa12.31□□□□□ -0.44
HDAC6-201ENST00000334136 CDH8P55286 799 aa12.31□□□□□ -0.44
HDAC6-201ENST00000334136 CDO1Q16878 200 aa12.31□□□□□ -0.44
HDAC6-201ENST00000334136 ZACNQ401N2 412 aa12.31□□□□□ -0.44
HDAC6-201ENST00000334136 ZBED8Q8IZ13 594 aa12.31□□□□□ -0.44
HDAC6-201ENST00000334136 ANKLE1Q8NAG6 615 aa12.31□□□□□ -0.44
HDAC6-201ENST00000334136 UBA3Q8TBC4 463 aa12.31□□□□□ -0.44
HDAC6-201ENST00000334136 FAM84AQ96KN4 292 aa12.31□□□□□ -0.44
HDAC6-201ENST00000334136 NUF2Q9BZD4 464 aa12.31□□□□□ -0.44
HDAC6-201ENST00000334136 UPF3AQ9H1J1 476 aaKnown RBP12.31□□□□□ -0.44
HDAC6-201ENST00000334136 MYH9P35579 1960 aaKnown RBP12.31□□□□□ -0.44
HDAC6-201ENST00000334136 hCG_2014768A0A024R1R8 64 aa12.31□□□□□ -0.44
HDAC6-201ENST00000334136 CARNS1A5YM72 827 aa12.31□□□□□ -0.44
HDAC6-201ENST00000334136 PIK3R2O00459 728 aa12.31□□□□□ -0.44
HDAC6-201ENST00000334136 EPHB6O15197 1021 aa12.31□□□□□ -0.44
HDAC6-201ENST00000334136 PAX7P23759 505 aa12.31□□□□□ -0.44
HDAC6-201ENST00000334136 TMPRSS15P98073 1019 aa12.31□□□□□ -0.44
HDAC6-201ENST00000334136 AMPD2Q01433 879 aa12.31□□□□□ -0.44
HDAC6-201ENST00000334136 GPS1Q13098 491 aa12.31□□□□□ -0.44
HDAC6-201ENST00000334136 DNAJC3Q13217 504 aa12.31□□□□□ -0.44
HDAC6-201ENST00000334136 SEPT6Q14141 434 aa12.31□□□□□ -0.44
HDAC6-201ENST00000334136 NFE2Q16621 373 aaPredicted RBP12.31□□□□□ -0.44
HDAC6-201ENST00000334136 LRRC36Q1X8D7 754 aa12.31□□□□□ -0.44
HDAC6-201ENST00000334136 FIGNQ5HY92 759 aa12.31□□□□□ -0.44
HDAC6-201ENST00000334136 IZUMO3Q5VZ72 239 aa12.31□□□□□ -0.44
HDAC6-201ENST00000334136 KLHL11Q9NVR0 708 aa12.31□□□□□ -0.44
HDAC6-201ENST00000334136 ADCY6O43306 1168 aa12.3□□□□□ -0.44
HDAC6-201ENST00000334136 UBOX5O94941 541 aa12.3□□□□□ -0.44
HDAC6-201ENST00000334136 RPL9P32969 192 aaKnown RBP12.3□□□□□ -0.44
HDAC6-201ENST00000334136 ALDH1A3P47895 512 aa12.3□□□□□ -0.44
HDAC6-201ENST00000334136 TRADDQ15628 312 aa12.3□□□□□ -0.44
HDAC6-201ENST00000334136 SMAD1Q15797 465 aaKnown RBP12.3□□□□□ -0.44
HDAC6-201ENST00000334136 FAM102AQ5T9C2 384 aaPredicted RBP12.3□□□□□ -0.44
HDAC6-201ENST00000334136 MAP7D3Q8IWC1 876 aa12.3□□□□□ -0.44
HDAC6-201ENST00000334136 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.3□□□□□ -0.44
HDAC6-201ENST00000334136 UROC1Q96N76 676 aa12.3□□□□□ -0.44
HDAC6-201ENST00000334136 PABPC3Q9H361 631 aaKnown RBP12.3□□□□□ -0.44
HDAC6-201ENST00000334136 CPSF3Q9UKF6 684 aaKnown RBP12.3□□□□□ -0.44
HDAC6-201ENST00000334136 IGKV6-21A0A0C4DH24 114 aa12.3□□□□□ -0.44
HDAC6-201ENST00000334136 NT5C1B-RDH14C9J2C7 533 aa12.3□□□□□ -0.44
HDAC6-201ENST00000334136 PI4K2BG5E9Z4 385 aa12.3□□□□□ -0.44
HDAC6-201ENST00000334136 CASQ2O14958 399 aaPredicted RBP12.3□□□□□ -0.44
HDAC6-201ENST00000334136 EOMESO95936 686 aa12.3□□□□□ -0.44
HDAC6-201ENST00000334136 NFKBIZQ9BYH8 718 aa12.3□□□□□ -0.44
HDAC6-201ENST00000334136 ZWILCHQ9H900 591 aa12.3□□□□□ -0.44
HDAC6-201ENST00000334136 BATF3Q9NR55 127 aa12.3□□□□□ -0.44
HDAC6-201ENST00000334136 VDRP11473 427 aa12.3□□□□□ -0.44
HDAC6-201ENST00000334136 NCF2P19878 526 aaPredicted RBP12.3□□□□□ -0.44
HDAC6-201ENST00000334136 COMTP21964 271 aa12.3□□□□□ -0.44
HDAC6-201ENST00000334136 ACAT1P24752 427 aaKnown RBP12.3□□□□□ -0.44
HDAC6-201ENST00000334136 PSMA2P25787 234 aa12.3□□□□□ -0.44
HDAC6-201ENST00000334136 CTNNB1P35222 781 aa12.3□□□□□ -0.44
HDAC6-201ENST00000334136 SH2D4BQ5SQS7 431 aa12.3□□□□□ -0.44
HDAC6-201ENST00000334136 BTBD8Q5XKL5 378 aa12.3□□□□□ -0.44
HDAC6-201ENST00000334136 LRRC43Q8N309 656 aa12.3□□□□□ -0.44
HDAC6-201ENST00000334136 CPA5Q8WXQ8 436 aa12.3□□□□□ -0.44
HDAC6-201ENST00000334136 CCDC124Q96CT7 223 aaKnown RBP12.3□□□□□ -0.44
HDAC6-201ENST00000334136 KLF6Q99612 283 aaPredicted RBP12.3□□□□□ -0.44
HDAC6-201ENST00000334136 SYT15Q9BQS2 421 aa12.3□□□□□ -0.44
HDAC6-201ENST00000334136 NPHS2Q9NP85 383 aa12.3□□□□□ -0.44
HDAC6-201ENST00000334136 BARX2Q9UMQ3 279 aaPredicted RBP12.3□□□□□ -0.44
HDAC6-201ENST00000334136 NDC80O14777 642 aa12.3□□□□□ -0.44
HDAC6-201ENST00000334136 ATP5HO75947 161 aa12.3□□□□□ -0.44
HDAC6-201ENST00000334136 FAM187BQ17R55 369 aa12.3□□□□□ -0.44
HDAC6-201ENST00000334136 GOLGA7BQ2TAP0 167 aa12.3□□□□□ -0.44
HDAC6-201ENST00000334136 SYCP2LQ5T4T6 812 aa12.3□□□□□ -0.44
HDAC6-201ENST00000334136 TDRD10Q5VZ19 366 aaKnown RBP12.3□□□□□ -0.44
HDAC6-201ENST00000334136 PSRC1Q6PGN9 363 aaPredicted RBP12.3□□□□□ -0.44
HDAC6-201ENST00000334136 FUKQ8N0W3 1084 aa12.3□□□□□ -0.44
HDAC6-201ENST00000334136 C18orf25Q96B23 403 aaPredicted RBP12.3□□□□□ -0.44
HDAC6-201ENST00000334136 CFAP36Q96G28 342 aa12.3□□□□□ -0.44
HDAC6-201ENST00000334136 SEMA4AQ9H3S1 761 aa12.3□□□□□ -0.44
HDAC6-201ENST00000334136 TMEM161AQ9NX61 479 aa12.3□□□□□ -0.44
HDAC6-201ENST00000334136 STAP1Q9ULZ2 295 aa12.3□□□□□ -0.44
HDAC6-201ENST00000334136 FAF1Q9UNN5 650 aaPredicted RBP12.3□□□□□ -0.44
HDAC6-201ENST00000334136 PRPSAP2O60256 369 aa12.29□□□□□ -0.44
HDAC6-201ENST00000334136 AP1G2O75843 785 aa12.29□□□□□ -0.44
HDAC6-201ENST00000334136 ADSSP30520 456 aa12.29□□□□□ -0.44
HDAC6-201ENST00000334136 SDC4P31431 198 aa12.29□□□□□ -0.44
HDAC6-201ENST00000334136 NDST1P52848 882 aa12.29□□□□□ -0.44
HDAC6-201ENST00000334136 ZNF844Q08AG5 666 aa12.29□□□□□ -0.44
HDAC6-201ENST00000334136 PDIA2Q13087 525 aaKnown RBP12.29□□□□□ -0.44
HDAC6-201ENST00000334136 LPIN1Q14693 890 aa12.29□□□□□ -0.44
HDAC6-201ENST00000334136 NFIL3Q16649 462 aa12.29□□□□□ -0.44
HDAC6-201ENST00000334136 MDH1BQ5I0G3 518 aa12.29□□□□□ -0.44
HDAC6-201ENST00000334136 C1orf146Q5VVC0 180 aa12.29□□□□□ -0.44
HDAC6-201ENST00000334136 CDCA2Q69YH5 1023 aaPredicted RBP12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms