RNA–Protein interactions for RNA: ENST00000326956.11

SSBP3-201, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 2

Gene SSBP3, Length 2,913 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-201ENST00000326956 C7orf26Q96N11 449 aa15.22■□□□□ 0.03
SSBP3-201ENST00000326956 DDX50Q9BQ39 737 aaKnown RBP15.22■□□□□ 0.03
SSBP3-201ENST00000326956 RAB6BQ9NRW1 208 aa15.22■□□□□ 0.03
SSBP3-201ENST00000326956 YDJCA8MPS7 323 aa15.21■□□□□ 0.03
SSBP3-201ENST00000326956 E5RJQ4 531 aa15.21■□□□□ 0.03
SSBP3-201ENST00000326956 FAM155BO75949 473 aa15.21■□□□□ 0.03
SSBP3-201ENST00000326956 TM7SF2O76062 418 aa15.21■□□□□ 0.03
SSBP3-201ENST00000326956 STBD1O95210 358 aa15.21■□□□□ 0.03
SSBP3-201ENST00000326956 HMGB2P26583 209 aaKnown RBP15.21■□□□□ 0.03
SSBP3-201ENST00000326956 NRLP54845 237 aa15.21■□□□□ 0.03
SSBP3-201ENST00000326956 SPDYE2Q495Y8 402 aa15.21■□□□□ 0.03
SSBP3-201ENST00000326956 RSBN1LQ6PCB5 846 aaPredicted RBP15.21■□□□□ 0.03
SSBP3-201ENST00000326956 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.21■□□□□ 0.035e-6■■□□□ 11.5
SSBP3-201ENST00000326956 CLPTM1LQ96KA5 538 aa15.21■□□□□ 0.03
SSBP3-201ENST00000326956 ASCC2Q9H1I8 757 aaPredicted RBP15.21■□□□□ 0.03
SSBP3-201ENST00000326956 RSAD1Q9HA92 442 aa15.21■□□□□ 0.03
SSBP3-201ENST00000326956 ZC3H7BQ9UGR2 993 aaKnown RBP15.21■□□□□ 0.03
SSBP3-201ENST00000326956 CNTNAP2Q9UHC6 1331 aa15.21■□□□□ 0.03
SSBP3-201ENST00000326956 AVILO75366 819 aa15.21■□□□□ 0.03
SSBP3-201ENST00000326956 KRT38O76015 456 aa15.21■□□□□ 0.03
SSBP3-201ENST00000326956 TFAMQ00059 246 aaKnown RBP15.21■□□□□ 0.03
SSBP3-201ENST00000326956 TBCCQ15814 346 aa15.21■□□□□ 0.03
SSBP3-201ENST00000326956 ZNF699Q32M78 642 aa15.21■□□□□ 0.03
SSBP3-201ENST00000326956 TREML1Q86YW5 311 aa15.21■□□□□ 0.03
SSBP3-201ENST00000326956 KBTBD2Q8IY47 623 aa15.21■□□□□ 0.03
SSBP3-201ENST00000326956 TFAP2BQ92481 460 aa15.21■□□□□ 0.03
SSBP3-201ENST00000326956 CNTN3Q9P232 1028 aa15.21■□□□□ 0.03
SSBP3-201ENST00000326956 NXF1Q9UBU9 619 aaKnown RBP15.21■□□□□ 0.03
SSBP3-201ENST00000326956 PLLPQ9Y342 182 aa15.21■□□□□ 0.03
SSBP3-201ENST00000326956 TEX264Q9Y6I9 313 aa15.21■□□□□ 0.03
SSBP3-201ENST00000326956 CNTNAP1P78357 1384 aa15.21■□□□□ 0.02
SSBP3-201ENST00000326956 MED7O43513 233 aa15.2■□□□□ 0.02
SSBP3-201ENST00000326956 LYNP07948 512 aa15.2■□□□□ 0.02
SSBP3-201ENST00000326956 KCNA2P16389 499 aa15.2■□□□□ 0.02
SSBP3-201ENST00000326956 DYNC1I2Q13409 638 aaKnown RBP15.2■□□□□ 0.02
SSBP3-201ENST00000326956 DGKZQ13574 1117 aa15.2■□□□□ 0.02
SSBP3-201ENST00000326956 DUOXA2Q1HG44 320 aa15.2■□□□□ 0.02
SSBP3-201ENST00000326956 PTPN20Q4JDL3 420 aa15.2■□□□□ 0.02
SSBP3-201ENST00000326956 CFAP157Q5JU67 520 aa15.2■□□□□ 0.02
SSBP3-201ENST00000326956 DENND1BQ6P3S1 775 aa15.2■□□□□ 0.02
SSBP3-201ENST00000326956 MTHFD1LQ6UB35 978 aa15.2■□□□□ 0.02
SSBP3-201ENST00000326956 WDR49Q8IV35 697 aa15.2■□□□□ 0.02
SSBP3-201ENST00000326956 WDTC1Q8N5D0 677 aa15.2■□□□□ 0.02
SSBP3-201ENST00000326956 PHC3Q8NDX5 983 aa15.2■□□□□ 0.02
SSBP3-201ENST00000326956 NSUN6Q8TEA1 469 aaKnown RBP15.2■□□□□ 0.02
SSBP3-201ENST00000326956 ECSITQ9BQ95 431 aa15.2■□□□□ 0.02
SSBP3-201ENST00000326956 PIGRP01833 764 aa15.2■□□□□ 0.02
SSBP3-201ENST00000326956 TGFB2P61812 414 aa15.2■□□□□ 0.02
SSBP3-201ENST00000326956 CDHR3Q6ZTQ4 885 aa15.2■□□□□ 0.02
SSBP3-201ENST00000326956 PORCNQ9H237 461 aa15.2■□□□□ 0.02
SSBP3-201ENST00000326956 PCDHGC3Q9UN70 934 aa15.2■□□□□ 0.02
SSBP3-201ENST00000326956 KLHL33A6NCF5 533 aa15.2■□□□□ 0.02
SSBP3-201ENST00000326956 CDH6P55285 790 aa15.2■□□□□ 0.02
SSBP3-201ENST00000326956 ACTR3P61158 418 aa15.2■□□□□ 0.02
SSBP3-201ENST00000326956 CUL3Q13618 768 aa15.2■□□□□ 0.02
SSBP3-201ENST00000326956 TFDP2Q14188 446 aa15.2■□□□□ 0.02
SSBP3-201ENST00000326956 HIC1Q14526 733 aa15.2■□□□□ 0.02
SSBP3-201ENST00000326956 STYK1Q6J9G0 422 aa15.2■□□□□ 0.02
SSBP3-201ENST00000326956 NPNTQ6UXI9 565 aa15.2■□□□□ 0.02
SSBP3-201ENST00000326956 BRSK2Q8IWQ3 736 aa15.2■□□□□ 0.02
SSBP3-201ENST00000326956 SLC25A41Q8N5S1 370 aa15.2■□□□□ 0.02
SSBP3-201ENST00000326956 PANX3Q96QZ0 392 aa15.2■□□□□ 0.02
SSBP3-201ENST00000326956 CENPKQ9BS16 269 aa15.2■□□□□ 0.02
SSBP3-201ENST00000326956 ARHGEF4Q9NR80 690 aa15.2■□□□□ 0.02
SSBP3-201ENST00000326956 PCMTD2Q9NV79 361 aa15.2■□□□□ 0.02
SSBP3-201ENST00000326956 PAK5Q9P286 719 aa15.2■□□□□ 0.02
SSBP3-201ENST00000326956 TELO2Q9Y4R8 837 aa15.2■□□□□ 0.02
SSBP3-201ENST00000326956 CHADO15335 359 aa15.19■□□□□ 0.02
SSBP3-201ENST00000326956 RTN3O95197 1032 aaPredicted RBP15.19■□□□□ 0.02
SSBP3-201ENST00000326956 MIPP30301 263 aa15.19■□□□□ 0.02
SSBP3-201ENST00000326956 CHRNA5P30532 468 aa15.19■□□□□ 0.02
SSBP3-201ENST00000326956 STX3Q13277 289 aa15.19■□□□□ 0.02
SSBP3-201ENST00000326956 BMPR2Q13873 1038 aa15.19■□□□□ 0.02
SSBP3-201ENST00000326956 ANGEL2Q5VTE6 544 aaKnown RBP15.19■□□□□ 0.02
SSBP3-201ENST00000326956 SCARA3Q6AZY7 606 aa15.19■□□□□ 0.02
SSBP3-201ENST00000326956 C1orf228Q6PIY5 440 aa15.19■□□□□ 0.02
SSBP3-201ENST00000326956 NDUFAF2Q8N183 169 aa15.19■□□□□ 0.02
SSBP3-201ENST00000326956 FBXO27Q8NI29 283 aa15.19■□□□□ 0.02
SSBP3-201ENST00000326956 FNIP1Q8TF40 1166 aa15.19■□□□□ 0.02
SSBP3-201ENST00000326956 IFT43Q96FT9 208 aa15.19■□□□□ 0.02
SSBP3-201ENST00000326956 SLC7A8Q9UHI5 535 aa15.19■□□□□ 0.02
SSBP3-201ENST00000326956 USP18Q9UMW8 372 aa15.19■□□□□ 0.02
SSBP3-201ENST00000326956 ZBTB12Q9Y330 459 aaPredicted RBP15.19■□□□□ 0.02
SSBP3-201ENST00000326956 MAD1L1Q9Y6D9 718 aa15.19■□□□□ 0.02
SSBP3-201ENST00000326956 CAPN14A8MX76 684 aa15.19■□□□□ 0.02
SSBP3-201ENST00000326956 FKBP6O75344 327 aa15.19■□□□□ 0.02
SSBP3-201ENST00000326956 OSBPP22059 807 aa15.19■□□□□ 0.02
SSBP3-201ENST00000326956 CDH5P33151 784 aaPredicted RBP15.19■□□□□ 0.02
SSBP3-201ENST00000326956 TNFSF9P41273 254 aa15.19■□□□□ 0.02
SSBP3-201ENST00000326956 ABHD15Q6UXT9 468 aa15.19■□□□□ 0.02
SSBP3-201ENST00000326956 RASSF3Q86WH2 238 aa15.19■□□□□ 0.02
SSBP3-201ENST00000326956 WDR75Q8IWA0 830 aaKnown RBP15.19■□□□□ 0.02
SSBP3-201ENST00000326956 ST13P4Q8IZP2 240 aaPredicted RBP15.19■□□□□ 0.02
SSBP3-201ENST00000326956 ARFGAP1Q8N6T3 406 aa15.19■□□□□ 0.02
SSBP3-201ENST00000326956 UBR7Q8N806 425 aa15.19■□□□□ 0.02
SSBP3-201ENST00000326956 PPP2R3CQ969Q6 453 aa15.19■□□□□ 0.02
SSBP3-201ENST00000326956 FRMD8Q9BZ67 464 aaPredicted RBP15.19■□□□□ 0.02
SSBP3-201ENST00000326956 VCX3BQ9H321 246 aa15.19■□□□□ 0.02
SSBP3-201ENST00000326956 RPAP3Q9H6T3 665 aaPredicted RBP15.19■□□□□ 0.02
SSBP3-201ENST00000326956 VCX3AQ9NNX9 186 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms