RNA–Protein interactions for RNA: ENST00000325404.2

SOX2-201, Transcript of SRY-box 2, humanhuman

APPRIS P1 BASIC

Gene SOX2, Length 2,513 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-201ENST00000325404 CD48P09326 243 aa20.73■□□□□ 0.91
SOX2-201ENST00000325404 MTDHQ86UE4 582 aaKnown RBP20.73■□□□□ 0.91
SOX2-201ENST00000325404 SPATA18Q8TC71 538 aa20.73■□□□□ 0.91
SOX2-201ENST00000325404 RTP4Q96DX8 246 aa20.73■□□□□ 0.91
SOX2-201ENST00000325404 NXF1Q9UBU9 619 aaKnown RBP20.73■□□□□ 0.91
SOX2-201ENST00000325404 TJP2Q9UDY2 1190 aa20.73■□□□□ 0.91
SOX2-201ENST00000325404 SIX4Q9UIU6 781 aa20.73■□□□□ 0.91
SOX2-201ENST00000325404 IKBKGQ9Y6K9 419 aa20.73■□□□□ 0.91
SOX2-201ENST00000325404 ZBTB42B2RXF5 422 aa20.73■□□□□ 0.91
SOX2-201ENST00000325404 LPXNO60711 386 aa20.73■□□□□ 0.91
SOX2-201ENST00000325404 CCDC22O60826 627 aa20.73■□□□□ 0.91
SOX2-201ENST00000325404 CILPO75339 1184 aa20.73■□□□□ 0.91
SOX2-201ENST00000325404 MARK3P27448 753 aa20.73■□□□□ 0.91
SOX2-201ENST00000325404 EEPD1Q7L9B9 569 aa20.73■□□□□ 0.91
SOX2-201ENST00000325404 CNPY3Q9BT09 278 aa20.73■□□□□ 0.91
SOX2-201ENST00000325404 TSSK1BQ9BXA7 367 aa20.73■□□□□ 0.91
SOX2-201ENST00000325404 RPF1Q9H9Y2 349 aaKnown RBP20.73■□□□□ 0.91
SOX2-201ENST00000325404 WDR3Q9UNX4 943 aaKnown RBP eCLIP20.73■□□□□ 0.91
SOX2-201ENST00000325404 CFAP69A5D8W1 941 aa20.72■□□□□ 0.91
SOX2-201ENST00000325404 TPBGLP0DKB5 382 aa20.72■□□□□ 0.91
SOX2-201ENST00000325404 ELK3P41970 407 aa20.72■□□□□ 0.91
SOX2-201ENST00000325404 PTK7Q13308 1070 aa20.72■□□□□ 0.91
SOX2-201ENST00000325404 KRT72Q14CN4 511 aa20.72■□□□□ 0.91
SOX2-201ENST00000325404 TMEM176AQ96HP8 235 aa20.72■□□□□ 0.91
SOX2-201ENST00000325404 NFKBIZQ9BYH8 718 aa20.72■□□□□ 0.91
SOX2-201ENST00000325404 C10orf88Q9H8K7 445 aa20.72■□□□□ 0.91
SOX2-201ENST00000325404 SLC17A7Q9P2U7 560 aa20.72■□□□□ 0.91
SOX2-201ENST00000325404 ZNF180Q9UJW8 692 aa20.72■□□□□ 0.91
SOX2-201ENST00000325404 SUFUQ9UMX1 484 aa20.72■□□□□ 0.91
SOX2-201ENST00000325404 DNAJC25-GNG10A0A024R161 153 aa20.72■□□□□ 0.91
SOX2-201ENST00000325404 TCRBV9S1A1TA0A576 114 aa20.72■□□□□ 0.91
SOX2-201ENST00000325404 CBX6O95503 412 aa20.72■□□□□ 0.91
SOX2-201ENST00000325404 CYP2C8P10632 490 aa20.72■□□□□ 0.91
SOX2-201ENST00000325404 VDRP11473 427 aa20.72■□□□□ 0.91
SOX2-201ENST00000325404 BASP1P80723 227 aaKnown RBP20.72■□□□□ 0.91
SOX2-201ENST00000325404 PRKD1Q15139 912 aaPredicted RBP20.72■□□□□ 0.91
SOX2-201ENST00000325404 TEX9Q8N6V9 391 aa20.72■□□□□ 0.91
SOX2-201ENST00000325404 EMC1Q8N766 993 aa20.72■□□□□ 0.91
SOX2-201ENST00000325404 SHCBP1Q8NEM2 672 aa20.72■□□□□ 0.91
SOX2-201ENST00000325404 USP6NLQ92738 828 aa20.72■□□□□ 0.91
SOX2-201ENST00000325404 FGD4Q96M96 766 aa20.72■□□□□ 0.91
SOX2-201ENST00000325404 CNTN3Q9P232 1028 aa20.72■□□□□ 0.91
SOX2-201ENST00000325404 PAK5Q9P286 719 aa20.72■□□□□ 0.91
SOX2-201ENST00000325404 MICAL2O94851 1124 aa20.71■□□□□ 0.91
SOX2-201ENST00000325404 INHBAP08476 426 aa20.71■□□□□ 0.91
SOX2-201ENST00000325404 GSTA2P09210 222 aa20.71■□□□□ 0.91
SOX2-201ENST00000325404 GPD2P43304 727 aa20.71■□□□□ 0.91
SOX2-201ENST00000325404 MAGEA6P43360 314 aa20.71■□□□□ 0.91
SOX2-201ENST00000325404 SLC26A2P50443 739 aa20.71■□□□□ 0.91
SOX2-201ENST00000325404 ZNF449Q6P9G9 518 aa20.71■□□□□ 0.91
SOX2-201ENST00000325404 TTC39CQ8N584 583 aa20.71■□□□□ 0.91
SOX2-201ENST00000325404 NKX1-2Q9UD57 310 aaPredicted RBP20.71■□□□□ 0.91
SOX2-201ENST00000325404 PCSK1NQ9UHG2 260 aa20.71■□□□□ 0.91
SOX2-201ENST00000325404 KIAA1257Q9ULG3 409 aa20.71■□□□□ 0.91
SOX2-201ENST00000325404 CHMP2BQ9UQN3 213 aa20.71■□□□□ 0.91
SOX2-201ENST00000325404 TRDMT1O14717 391 aaKnown RBP20.71■□□□□ 0.91
SOX2-201ENST00000325404 ITGBL1O95965 494 aaPredicted RBP20.71■□□□□ 0.91
SOX2-201ENST00000325404 P4HA1P13674 534 aa20.71■□□□□ 0.91
SOX2-201ENST00000325404 EPHB2P29323 1055 aa20.71■□□□□ 0.91
SOX2-201ENST00000325404 GCKP35557 465 aa20.71■□□□□ 0.91
SOX2-201ENST00000325404 ARFIP2P53365 341 aa20.71■□□□□ 0.91
SOX2-201ENST00000325404 FKBP1BP68106 108 aa20.71■□□□□ 0.91
SOX2-201ENST00000325404 DARS2Q6PI48 645 aaKnown RBP20.71■□□□□ 0.91
SOX2-201ENST00000325404 PTCD3Q96EY7 689 aaKnown RBP20.71■□□□□ 0.91
SOX2-201ENST00000325404 NUDCD1Q96RS6 583 aa20.71■□□□□ 0.91
SOX2-201ENST00000325404 GPR20Q99678 358 aa20.71■□□□□ 0.91
SOX2-201ENST00000325404 SDCBP2Q9H190 292 aa20.71■□□□□ 0.91
SOX2-201ENST00000325404 DCLRE1BQ9H816 532 aa20.71■□□□□ 0.91
SOX2-201ENST00000325404 HAUS5O94927 633 aa20.7■□□□□ 0.9
SOX2-201ENST00000325404 GPD1P21695 349 aa20.7■□□□□ 0.9
SOX2-201ENST00000325404 PSMC4P43686 418 aa20.7■□□□□ 0.9
SOX2-201ENST00000325404 CDK16Q00536 496 aa20.7■□□□□ 0.9
SOX2-201ENST00000325404 POU5F1BQ06416 359 aa20.7■□□□□ 0.9
SOX2-201ENST00000325404 PDK2Q15119 407 aa20.7■□□□□ 0.9
SOX2-201ENST00000325404 C4orf22Q6V702 233 aa20.7■□□□□ 0.9
SOX2-201ENST00000325404 SLC26A11Q86WA9 606 aa20.7■□□□□ 0.9
SOX2-201ENST00000325404 IGDCC3Q8IVU1 814 aa20.7■□□□□ 0.9
SOX2-201ENST00000325404 TRIM42Q8IWZ5 723 aa20.7■□□□□ 0.9
SOX2-201ENST00000325404 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP20.7■□□□□ 0.9
SOX2-201ENST00000325404 C1orf127Q8N9H9 656 aa20.7■□□□□ 0.9
SOX2-201ENST00000325404 RFWD2Q8NHY2 731 aa20.7■□□□□ 0.9
SOX2-201ENST00000325404 HSPH1Q92598 858 aa20.7■□□□□ 0.9
SOX2-201ENST00000325404 SKA1Q96BD8 255 aa20.7■□□□□ 0.9
SOX2-201ENST00000325404 ADPGKQ9BRR6 497 aa20.7■□□□□ 0.9
SOX2-201ENST00000325404 CALN1Q9BXU9 219 aa20.7■□□□□ 0.9
SOX2-201ENST00000325404 ELOVL4Q9GZR5 314 aa20.7■□□□□ 0.9
SOX2-201ENST00000325404 CDT1Q9H211 546 aa20.7■□□□□ 0.9
SOX2-201ENST00000325404 ANK1P16157 1881 aa20.7■□□□□ 0.9
SOX2-201ENST00000325404 GM2AP17900 193 aa20.7■□□□□ 0.9
SOX2-201ENST00000325404 RAP1GAPP47736 663 aa20.7■□□□□ 0.9
SOX2-201ENST00000325404 GTF2A2P52657 109 aa20.7■□□□□ 0.9
SOX2-201ENST00000325404 CDK18Q07002 472 aa20.7■□□□□ 0.9
SOX2-201ENST00000325404 TTC39BQ5VTQ0 682 aaPredicted RBP20.7■□□□□ 0.9
SOX2-201ENST00000325404 MAP7D3Q8IWC1 876 aa20.7■□□□□ 0.9
SOX2-201ENST00000325404 CXorf38Q8TB03 319 aa20.7■□□□□ 0.9
SOX2-201ENST00000325404 NSL1Q96IY1 281 aa20.7■□□□□ 0.9
SOX2-201ENST00000325404 BTBD10Q9BSF8 475 aa20.7■□□□□ 0.9
SOX2-201ENST00000325404 MKS1Q9NXB0 559 aa20.7■□□□□ 0.9
SOX2-201ENST00000325404 KBTBD13C9JR72 458 aa20.69■□□□□ 0.9
SOX2-201ENST00000325404 TNFAIP2Q03169 654 aa20.69■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms