RNA–Protein interactions for RNA: ENST00000324938.9

LIMS2-201, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIMS2, Length 2,111 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-201ENST00000324938 CDHR5Q9HBB8 845 aa22.37■■□□□ 1.17
LIMS2-201ENST00000324938 FAM49BQ9NUQ9 324 aa22.37■■□□□ 1.17
LIMS2-201ENST00000324938 CLEC11AQ9Y240 323 aa22.37■■□□□ 1.17
LIMS2-201ENST00000324938 USP15Q9Y4E8 981 aaPredicted RBP22.37■■□□□ 1.17
LIMS2-201ENST00000324938 DOCK3Q8IZD9 2030 aa22.36■■□□□ 1.17
LIMS2-201ENST00000324938 TCRBV7S3A2A0A539 114 aa22.36■■□□□ 1.17
LIMS2-201ENST00000324938 MBLAC1A4D2B0 266 aaPredicted RBP22.36■■□□□ 1.17
LIMS2-201ENST00000324938 A6NJR5 290 aa22.36■■□□□ 1.17
LIMS2-201ENST00000324938 ADCY1Q08828 1119 aa22.36■■□□□ 1.17
LIMS2-201ENST00000324938 PKN2Q16513 984 aaKnown RBP22.36■■□□□ 1.17
LIMS2-201ENST00000324938 BOLA3Q53S33 107 aa22.36■■□□□ 1.17
LIMS2-201ENST00000324938 ARHGAP17Q68EM7 881 aa22.36■■□□□ 1.17
LIMS2-201ENST00000324938 STK32AQ8WU08 396 aa22.36■■□□□ 1.17
LIMS2-201ENST00000324938 KHSRPQ92945 711 aaKnown RBP eCLIP22.36■■□□□ 1.17
LIMS2-201ENST00000324938 C18orf25Q96B23 403 aaPredicted RBP22.36■■□□□ 1.17
LIMS2-201ENST00000324938 TBCBQ99426 244 aa22.36■■□□□ 1.17
LIMS2-201ENST00000324938 HESX1Q9UBX0 185 aa22.36■■□□□ 1.17
LIMS2-201ENST00000324938 XPO7Q9UIA9 1087 aaKnown RBP22.36■■□□□ 1.17
LIMS2-201ENST00000324938 RABGEF1Q9UJ41 708 aa22.36■■□□□ 1.17
LIMS2-201ENST00000324938 SLC15A5A6NIM6 579 aa22.36■■□□□ 1.17
LIMS2-201ENST00000324938 DARSP14868 501 aaKnown RBP22.36■■□□□ 1.17
LIMS2-201ENST00000324938 SDC4P31431 198 aa22.36■■□□□ 1.17
LIMS2-201ENST00000324938 GEMIN4P57678 1058 aaKnown RBP22.36■■□□□ 1.17
LIMS2-201ENST00000324938 SNX16P57768 344 aa22.36■■□□□ 1.17
LIMS2-201ENST00000324938 ATP11AP98196 1134 aa22.36■■□□□ 1.17
LIMS2-201ENST00000324938 KRT81Q14533 505 aa22.36■■□□□ 1.17
LIMS2-201ENST00000324938 C9orf57Q5W0N0 161 aa22.36■■□□□ 1.17
LIMS2-201ENST00000324938 DARS2Q6PI48 645 aaKnown RBP22.36■■□□□ 1.17
LIMS2-201ENST00000324938 TRPM8Q7Z2W7 1104 aa22.36■■□□□ 1.17
LIMS2-201ENST00000324938 VSIG1Q86XK7 387 aa22.36■■□□□ 1.17
LIMS2-201ENST00000324938 ZDHHC17Q8IUH5 632 aa22.36■■□□□ 1.17
LIMS2-201ENST00000324938 TRAF3IP1Q8TDR0 691 aaPredicted RBP22.36■■□□□ 1.17
LIMS2-201ENST00000324938 SMG5Q9UPR3 1016 aaKnown RBP22.36■■□□□ 1.17
LIMS2-201ENST00000324938 HES2Q9Y543 173 aa22.36■■□□□ 1.17
LIMS2-201ENST00000324938 PAPSS1O43252 624 aaPredicted RBP22.35■■□□□ 1.17
LIMS2-201ENST00000324938 RECQL4O94761 1208 aa22.35■■□□□ 1.17
LIMS2-201ENST00000324938 TSHRP16473 764 aa22.35■■□□□ 1.17
LIMS2-201ENST00000324938 KRT15P19012 456 aa22.35■■□□□ 1.17
LIMS2-201ENST00000324938 WDR4P57081 412 aaKnown RBP22.35■■□□□ 1.17
LIMS2-201ENST00000324938 FKBP1BP68106 108 aa22.35■■□□□ 1.17
LIMS2-201ENST00000324938 IL9RQ01113 521 aa22.35■■□□□ 1.17
LIMS2-201ENST00000324938 RNASELQ05823 741 aaKnown RBP22.35■■□□□ 1.17
LIMS2-201ENST00000324938 GLRA4Q5JXX5 417 aa22.35■■□□□ 1.17
LIMS2-201ENST00000324938 PDIK1LQ8N165 341 aa22.35■■□□□ 1.17
LIMS2-201ENST00000324938 FAM172AQ8WUF8 416 aa22.35■■□□□ 1.17
LIMS2-201ENST00000324938 NXF3Q9H4D5 531 aaKnown RBP22.35■■□□□ 1.17
LIMS2-201ENST00000324938 ACSS3Q9H6R3 686 aa22.35■■□□□ 1.17
LIMS2-201ENST00000324938 NGRNQ9NPE2 291 aaKnown RBP22.35■■□□□ 1.17
LIMS2-201ENST00000324938 UBQLN1Q9UMX0 589 aaKnown RBP22.35■■□□□ 1.17
LIMS2-201ENST00000324938 GABBR2O75899 941 aa22.34■■□□□ 1.17
LIMS2-201ENST00000324938 ASMTLO95671 621 aa22.34■■□□□ 1.17
LIMS2-201ENST00000324938 GSTA1P08263 222 aa22.34■■□□□ 1.17
LIMS2-201ENST00000324938 CYP2C9P11712 490 aa22.34■■□□□ 1.17
LIMS2-201ENST00000324938 IL4RP24394 825 aa22.34■■□□□ 1.17
LIMS2-201ENST00000324938 BASP1P80723 227 aaKnown RBP22.34■■□□□ 1.17
LIMS2-201ENST00000324938 SF3A3Q12874 501 aaKnown RBP eCLIP22.34■■□□□ 1.17
LIMS2-201ENST00000324938 ZC3H18Q86VM9 953 aaKnown RBP22.34■■□□□ 1.17
LIMS2-201ENST00000324938 FBXO36Q8NEA4 188 aa22.34■■□□□ 1.17
LIMS2-201ENST00000324938 DENND1AQ8TEH3 1009 aa22.34■■□□□ 1.17
LIMS2-201ENST00000324938 SMC6Q96SB8 1091 aa22.34■■□□□ 1.17
LIMS2-201ENST00000324938 NCAPGQ9BPX3 1015 aa22.34■■□□□ 1.17
LIMS2-201ENST00000324938 PCDH18Q9HCL0 1135 aa22.34■■□□□ 1.17
LIMS2-201ENST00000324938 DYNC1LI2O43237 492 aaPredicted RBP22.34■■□□□ 1.17
LIMS2-201ENST00000324938 SUN1O94901 812 aa22.34■■□□□ 1.17
LIMS2-201ENST00000324938 DESP17661 470 aa22.34■■□□□ 1.17
LIMS2-201ENST00000324938 TGM2P21980 687 aa22.34■■□□□ 1.17
LIMS2-201ENST00000324938 AXLP30530 894 aa22.34■■□□□ 1.17
LIMS2-201ENST00000324938 SSTR1P30872 391 aa22.34■■□□□ 1.17
LIMS2-201ENST00000324938 SOWAHAQ2M3V2 549 aa22.34■■□□□ 1.17
LIMS2-201ENST00000324938 KLHL38Q2WGJ6 581 aa22.34■■□□□ 1.17
LIMS2-201ENST00000324938 TAB3Q8N5C8 712 aaPredicted RBP22.34■■□□□ 1.17
LIMS2-201ENST00000324938 OR6B3Q8NGW1 331 aa22.34■■□□□ 1.17
LIMS2-201ENST00000324938 PTPN18Q99952 460 aa22.34■■□□□ 1.17
LIMS2-201ENST00000324938 DHRS4Q9BTZ2 278 aa22.34■■□□□ 1.17
LIMS2-201ENST00000324938 TRIM6Q9C030 488 aaPredicted RBP22.34■■□□□ 1.17
LIMS2-201ENST00000324938 SLC5A4Q9NY91 659 aa22.34■■□□□ 1.17
LIMS2-201ENST00000324938 GJD2Q9UKL4 321 aa22.34■■□□□ 1.17
LIMS2-201ENST00000324938 SLC12A4Q9UP95 1085 aa22.34■■□□□ 1.17
LIMS2-201ENST00000324938 GNEQ9Y223 722 aaKnown RBP22.34■■□□□ 1.17
LIMS2-201ENST00000324938 MDM4O15151 490 aa22.33■■□□□ 1.17
LIMS2-201ENST00000324938 ATP2C2O75185 946 aa22.33■■□□□ 1.17
LIMS2-201ENST00000324938 SPAG7O75391 227 aa22.33■■□□□ 1.17
LIMS2-201ENST00000324938 DNAJC8O75937 253 aaPredicted RBP22.33■■□□□ 1.17
LIMS2-201ENST00000324938 TAC1P20366 129 aa22.33■■□□□ 1.17
LIMS2-201ENST00000324938 IRF5Q13568 498 aa22.33■■□□□ 1.17
LIMS2-201ENST00000324938 KCNJ11Q14654 390 aa22.33■■□□□ 1.17
LIMS2-201ENST00000324938 SPRYD7Q5W111 196 aa22.33■■□□□ 1.17
LIMS2-201ENST00000324938 SCYL2Q6P3W7 929 aa22.33■■□□□ 1.17
LIMS2-201ENST00000324938 SPATA21Q7Z572 469 aa22.33■■□□□ 1.17
LIMS2-201ENST00000324938 SCUBE3Q8IX30 993 aa22.33■■□□□ 1.17
LIMS2-201ENST00000324938 PLD5Q8N7P1 536 aa22.33■■□□□ 1.17
LIMS2-201ENST00000324938 RTP4Q96DX8 246 aa22.33■■□□□ 1.17
LIMS2-201ENST00000324938 SNRNP25Q9BV90 132 aaKnown RBP22.33■■□□□ 1.17
LIMS2-201ENST00000324938 KIF9Q9HAQ2 790 aa22.33■■□□□ 1.17
LIMS2-201ENST00000324938 TMEM51Q9NW97 253 aa22.33■■□□□ 1.17
LIMS2-201ENST00000324938 H7C0C1 242 aa22.33■■□□□ 1.16
LIMS2-201ENST00000324938 APOL1O14791 398 aa22.33■■□□□ 1.16
LIMS2-201ENST00000324938 HNRNPH1P31943 449 aaKnown RBP22.33■■□□□ 1.16
LIMS2-201ENST00000324938 ATP5OP48047 213 aa22.33■■□□□ 1.16
LIMS2-201ENST00000324938 NRLP54845 237 aa22.33■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms