RNA–Protein interactions for RNA: ENST00000299543.8

CTDP1-202, Transcript of CTD phosphatase subunit 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CTDP1, Length 3,380 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1-202ENST00000299543 NMRK1Q9NWW6 199 aa14.03□□□□□ -0.16
CTDP1-202ENST00000299543 RABGEF1Q9UJ41 708 aa14.03□□□□□ -0.16
CTDP1-202ENST00000299543 SHOC2Q9UQ13 582 aa14.03□□□□□ -0.16
CTDP1-202ENST00000299543 LRRC42Q9Y546 428 aa14.03□□□□□ -0.16
CTDP1-202ENST00000299543 ACTL7BQ9Y614 415 aa14.03□□□□□ -0.16
CTDP1-202ENST00000299543 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP14.02□□□□□ -0.16
CTDP1-202ENST00000299543 NFKBIEO00221 500 aa14.02□□□□□ -0.16
CTDP1-202ENST00000299543 ITGAVP06756 1048 aa14.02□□□□□ -0.16
CTDP1-202ENST00000299543 ELK3P41970 407 aa14.02□□□□□ -0.16
CTDP1-202ENST00000299543 ZNF132P52740 706 aa14.02□□□□□ -0.16
CTDP1-202ENST00000299543 EFNA5P52803 228 aa14.02□□□□□ -0.16
CTDP1-202ENST00000299543 PDK4Q16654 411 aa14.02□□□□□ -0.16
CTDP1-202ENST00000299543 ASCC2Q9H1I8 757 aaPredicted RBP14.02□□□□□ -0.16
CTDP1-202ENST00000299543 TMEM134Q9H6X4 195 aa14.02□□□□□ -0.16
CTDP1-202ENST00000299543 ETNK2Q9NVF9 386 aa14.02□□□□□ -0.16
CTDP1-202ENST00000299543 BTBD7Q9P203 1132 aa14.02□□□□□ -0.16
CTDP1-202ENST00000299543 EDF1O60869 148 aaKnown RBP14.02□□□□□ -0.17
CTDP1-202ENST00000299543 LSM8O95777 96 aaKnown RBP14.02□□□□□ -0.17
CTDP1-202ENST00000299543 ERBB2P04626 1255 aa14.02□□□□□ -0.17
CTDP1-202ENST00000299543 INHBAP08476 426 aa14.02□□□□□ -0.17
CTDP1-202ENST00000299543 NFICP08651 508 aa14.02□□□□□ -0.17
CTDP1-202ENST00000299543 IMPDH2P12268 514 aa14.02□□□□□ -0.17
CTDP1-202ENST00000299543 CALB2P22676 271 aa14.02□□□□□ -0.17
CTDP1-202ENST00000299543 EIF4BP23588 611 aaKnown RBP14.02□□□□□ -0.17
CTDP1-202ENST00000299543 NLRP9Q7RTR0 991 aa14.02□□□□□ -0.17
CTDP1-202ENST00000299543 CCDC125Q86Z20 511 aa14.02□□□□□ -0.17
CTDP1-202ENST00000299543 PPM1NQ8N819 430 aa14.02□□□□□ -0.17
CTDP1-202ENST00000299543 FAF2Q96CS3 445 aa14.02□□□□□ -0.17
CTDP1-202ENST00000299543 FAM111AQ96PZ2 611 aa14.02□□□□□ -0.17
CTDP1-202ENST00000299543 RAB3IPQ96QF0 476 aaPredicted RBP14.02□□□□□ -0.17
CTDP1-202ENST00000299543 CAMKK2Q96RR4 588 aa14.02□□□□□ -0.17
CTDP1-202ENST00000299543 RMI1Q9H9A7 625 aa14.02□□□□□ -0.17
CTDP1-202ENST00000299543 STAU2Q9NUL3 570 aaKnown RBP eCLIP14.02□□□□□ -0.17
CTDP1-202ENST00000299543 EURLQ9NYK6 297 aa14.02□□□□□ -0.17
CTDP1-202ENST00000299543 LPXNO60711 386 aa14.02□□□□□ -0.17
CTDP1-202ENST00000299543 MAFO75444 373 aaPredicted RBP14.02□□□□□ -0.17
CTDP1-202ENST00000299543 FAM155BO75949 473 aa14.02□□□□□ -0.17
CTDP1-202ENST00000299543 ARIH2O95376 493 aa14.02□□□□□ -0.17
CTDP1-202ENST00000299543 PIGRP01833 764 aa14.02□□□□□ -0.17
CTDP1-202ENST00000299543 YY1P25490 414 aa14.02□□□□□ -0.17
CTDP1-202ENST00000299543 CACNA2D1P54289 1103 aa14.02□□□□□ -0.17
CTDP1-202ENST00000299543 OAZ1P54368 228 aa14.02□□□□□ -0.17
CTDP1-202ENST00000299543 PPP6R3Q5H9R7 873 aaPredicted RBP14.02□□□□□ -0.17
CTDP1-202ENST00000299543 ZPBP2Q6X784 338 aa14.02□□□□□ -0.17
CTDP1-202ENST00000299543 SLC35B2Q8TB61 432 aa14.02□□□□□ -0.17
CTDP1-202ENST00000299543 DENND1AQ8TEH3 1009 aa14.02□□□□□ -0.17
CTDP1-202ENST00000299543 NKD2Q969F2 451 aaPredicted RBP14.02□□□□□ -0.17
CTDP1-202ENST00000299543 NIFKQ9BYG3 293 aaKnown RBP14.02□□□□□ -0.17
CTDP1-202ENST00000299543 SLC13A1Q9BZW2 595 aa14.02□□□□□ -0.17
CTDP1-202ENST00000299543 IQCGQ9H095 443 aaKnown RBP14.02□□□□□ -0.17
CTDP1-202ENST00000299543 RAB6BQ9NRW1 208 aa14.02□□□□□ -0.17
CTDP1-202ENST00000299543 STRIP2Q9ULQ0 834 aa14.02□□□□□ -0.17
CTDP1-202ENST00000299543 USP18Q9UMW8 372 aa14.02□□□□□ -0.17
CTDP1-202ENST00000299543 CNTN6Q9UQ52 1028 aa14.02□□□□□ -0.17
CTDP1-202ENST00000299543 STARD13Q9Y3M8 1113 aa14.02□□□□□ -0.17
CTDP1-202ENST00000299543 ITGBL1O95965 494 aaPredicted RBP14.01□□□□□ -0.17
CTDP1-202ENST00000299543 TROVE2P10155 538 aaKnown RBP eCLIP14.01□□□□□ -0.17
CTDP1-202ENST00000299543 ASPAP45381 313 aa14.01□□□□□ -0.17
CTDP1-202ENST00000299543 ZNF280AP59817 542 aaPredicted RBP14.01□□□□□ -0.17
CTDP1-202ENST00000299543 IRX4P78413 519 aa14.01□□□□□ -0.17
CTDP1-202ENST00000299543 KRT81Q14533 505 aa14.01□□□□□ -0.17
CTDP1-202ENST00000299543 ACBD5Q5T8D3 534 aaPredicted RBP14.01□□□□□ -0.17
CTDP1-202ENST00000299543 LRRC38Q5VT99 294 aa14.01□□□□□ -0.17
CTDP1-202ENST00000299543 IER5Q5VY09 327 aa14.01□□□□□ -0.17
CTDP1-202ENST00000299543 EFCAB12Q6NXP0 572 aa14.01□□□□□ -0.17
CTDP1-202ENST00000299543 PPP1R2P3Q6NXS1 205 aa14.01□□□□□ -0.17
CTDP1-202ENST00000299543 IGDCC3Q8IVU1 814 aa14.01□□□□□ -0.17
CTDP1-202ENST00000299543 RFWD2Q8NHY2 731 aa14.01□□□□□ -0.17
CTDP1-202ENST00000299543 ZFAND2BQ8WV99 257 aa14.01□□□□□ -0.17
CTDP1-202ENST00000299543 KLRG1Q96E93 195 aa14.01□□□□□ -0.17
CTDP1-202ENST00000299543 CPB2Q96IY4 423 aa14.01□□□□□ -0.17
CTDP1-202ENST00000299543 DNAJC1Q96KC8 554 aaKnown RBP14.01□□□□□ -0.17
CTDP1-202ENST00000299543 SPATA33Q96N06 139 aa14.01□□□□□ -0.17
CTDP1-202ENST00000299543 MINDY3Q9H8M7 445 aa14.01□□□□□ -0.17
CTDP1-202ENST00000299543 SOWAHBA6NEL2 793 aa14.01□□□□□ -0.17
CTDP1-202ENST00000299543 SIGLEC16A6NMB1 481 aa14.01□□□□□ -0.17
CTDP1-202ENST00000299543 DCTN3O75935 186 aa14.01□□□□□ -0.17
CTDP1-202ENST00000299543 HOXC6P09630 235 aa14.01□□□□□ -0.17
CTDP1-202ENST00000299543 PDGFRAP16234 1089 aa14.01□□□□□ -0.17
CTDP1-202ENST00000299543 PTK7Q13308 1070 aa14.01□□□□□ -0.17
CTDP1-202ENST00000299543 GJC2Q5T442 439 aaPredicted RBP14.01□□□□□ -0.17
CTDP1-202ENST00000299543 TEX9Q8N6V9 391 aa14.01□□□□□ -0.17
CTDP1-202ENST00000299543 STK32AQ8WU08 396 aa14.01□□□□□ -0.17
CTDP1-202ENST00000299543 CPSF3Q9UKF6 684 aaKnown RBP14.01□□□□□ -0.17
CTDP1-202ENST00000299543 MED7O43513 233 aa14□□□□□ -0.17
CTDP1-202ENST00000299543 TAP1Q03518 808 aa14□□□□□ -0.17
CTDP1-202ENST00000299543 FAAP100Q0VG06 881 aa14□□□□□ -0.17
CTDP1-202ENST00000299543 KBTBD12Q3ZCT8 623 aa14□□□□□ -0.17
CTDP1-202ENST00000299543 MFSD4BQ5TF39 518 aa14□□□□□ -0.17
CTDP1-202ENST00000299543 OLFML2BQ68BL8 750 aa14□□□□□ -0.17
CTDP1-202ENST00000299543 PCGF5Q86SE9 256 aa14□□□□□ -0.17
CTDP1-202ENST00000299543 FBXO16Q8IX29 292 aaPredicted RBP14□□□□□ -0.17
CTDP1-202ENST00000299543 NRG4Q8WWG1 115 aa14□□□□□ -0.17
CTDP1-202ENST00000299543 IFT43Q96FT9 208 aa14□□□□□ -0.17
CTDP1-202ENST00000299543 TBC1D10AQ9BXI6 508 aa14□□□□□ -0.17
CTDP1-202ENST00000299543 SENP1Q9P0U3 644 aa14□□□□□ -0.17
CTDP1-202ENST00000299543 MAD1L1Q9Y6D9 718 aa14□□□□□ -0.17
CTDP1-202ENST00000299543 CCDC195A0A1B0GUA6 201 aa14□□□□□ -0.17
CTDP1-202ENST00000299543 KBTBD13C9JR72 458 aa14□□□□□ -0.17
CTDP1-202ENST00000299543 PRPF4O43172 522 aaKnown RBP eCLIP14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms