RNA–Protein interactions for RNA: ENST00000295701.9

CNOT9-202, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

TSL 1 (best) BASIC

Gene CNOT9, Length 1,126 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-202ENST00000295701 SLC6A11P48066 632 aa9.93□□□□□ -0.82
CNOT9-202ENST00000295701 RBP5P82980 135 aa9.93□□□□□ -0.82
CNOT9-202ENST00000295701 AMPD2Q01433 879 aa9.93□□□□□ -0.82
CNOT9-202ENST00000295701 FBXO43Q4G163 708 aa9.93□□□□□ -0.82
CNOT9-202ENST00000295701 PSAPL1Q6NUJ1 521 aa9.93□□□□□ -0.82
CNOT9-202ENST00000295701 LIMS2Q7Z4I7 341 aa9.93□□□□□ -0.82
CNOT9-202ENST00000295701 BRAPQ7Z569 592 aa9.93□□□□□ -0.82
CNOT9-202ENST00000295701 CBWD2Q8IUF1 395 aa9.93□□□□□ -0.82
CNOT9-202ENST00000295701 TMEM86AQ8N2M4 240 aa9.93□□□□□ -0.82
CNOT9-202ENST00000295701 TOP6BLQ8N6T0 577 aa9.93□□□□□ -0.82
CNOT9-202ENST00000295701 FRMD1Q8N878 549 aa9.93□□□□□ -0.82
CNOT9-202ENST00000295701 USP33Q8TEY7 942 aa9.93□□□□□ -0.82
CNOT9-202ENST00000295701 DDX1Q92499 740 aaKnown RBP9.93□□□□□ -0.82
CNOT9-202ENST00000295701 ATP2A3Q93084 1043 aa9.93□□□□□ -0.82
CNOT9-202ENST00000295701 MYLPFQ96A32 169 aa9.93□□□□□ -0.82
CNOT9-202ENST00000295701 SYT15Q9BQS2 421 aa9.93□□□□□ -0.82
CNOT9-202ENST00000295701 TMEM206Q9H813 350 aa9.93□□□□□ -0.82
CNOT9-202ENST00000295701 ABCB6Q9NP58 842 aa9.93□□□□□ -0.82
CNOT9-202ENST00000295701 ZDHHC4Q9NPG8 344 aa9.93□□□□□ -0.82
CNOT9-202ENST00000295701 TMEM30AQ9NV96 361 aa9.93□□□□□ -0.82
CNOT9-202ENST00000295701 PANK4Q9NVE7 773 aa9.93□□□□□ -0.82
CNOT9-202ENST00000295701 MAGEC2Q9UBF1 373 aaPredicted RBP9.93□□□□□ -0.82
CNOT9-202ENST00000295701 UXTQ9UBK9 157 aaPredicted RBP9.93□□□□□ -0.82
CNOT9-202ENST00000295701 SEL1LQ9UBV2 794 aa9.93□□□□□ -0.82
CNOT9-202ENST00000295701 STK17AQ9UEE5 414 aa9.93□□□□□ -0.82
CNOT9-202ENST00000295701 CCDC39Q9UFE4 941 aa9.93□□□□□ -0.82
CNOT9-202ENST00000295701 ITGA11Q9UKX5 1188 aa9.93□□□□□ -0.82
CNOT9-202ENST00000295701 EXOC7Q9UPT5 735 aa9.93□□□□□ -0.82
CNOT9-202ENST00000295701 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.93□□□□□ -0.82
CNOT9-202ENST00000295701 ASPMQ8IZT6 3477 aa9.92□□□□□ -0.82
CNOT9-202ENST00000295701 TNRC6BQ9UPQ9 1833 aaKnown RBP9.92□□□□□ -0.82
CNOT9-202ENST00000295701 CACNA1EQ15878 2313 aa9.92□□□□□ -0.82
CNOT9-202ENST00000295701 FRMD3A2A2Y4 597 aa9.92□□□□□ -0.82
CNOT9-202ENST00000295701 LEFTY2O00292 366 aa9.92□□□□□ -0.82
CNOT9-202ENST00000295701 TERTO14746 1132 aaKnown RBP9.92□□□□□ -0.82
CNOT9-202ENST00000295701 RHOBTB1O94844 696 aa9.92□□□□□ -0.82
CNOT9-202ENST00000295701 LDHAP00338 332 aaKnown RBP9.92□□□□□ -0.82
CNOT9-202ENST00000295701 CST3P01034 146 aaPredicted RBP9.92□□□□□ -0.82
CNOT9-202ENST00000295701 GAP43P17677 238 aa9.92□□□□□ -0.82
CNOT9-202ENST00000295701 SPINK2P20155 84 aa9.92□□□□□ -0.82
CNOT9-202ENST00000295701 PCSK1P29120 753 aa9.92□□□□□ -0.82
CNOT9-202ENST00000295701 HOXD13P35453 343 aa9.92□□□□□ -0.82
CNOT9-202ENST00000295701 GRIK1P39086 918 aa9.92□□□□□ -0.82
CNOT9-202ENST00000295701 LHX1P48742 406 aa9.92□□□□□ -0.82
CNOT9-202ENST00000295701 CACNA2D1P54289 1103 aa9.92□□□□□ -0.82
CNOT9-202ENST00000295701 WDR4P57081 412 aaKnown RBP9.92□□□□□ -0.82
CNOT9-202ENST00000295701 RESTQ13127 1097 aa9.92□□□□□ -0.82
CNOT9-202ENST00000295701 ELF2Q15723 593 aa9.92□□□□□ -0.82
CNOT9-202ENST00000295701 CFAP221Q4G0U5 840 aa9.92□□□□□ -0.82
CNOT9-202ENST00000295701 EMC10Q5UCC4 262 aa9.92□□□□□ -0.82
CNOT9-202ENST00000295701 ANO7Q6IWH7 933 aa9.92□□□□□ -0.82
CNOT9-202ENST00000295701 C12orf40Q86WS4 652 aa9.92□□□□□ -0.82
CNOT9-202ENST00000295701 TTC30AQ86WT1 665 aa9.92□□□□□ -0.82
CNOT9-202ENST00000295701 PDILTQ8N807 584 aa9.92□□□□□ -0.82
CNOT9-202ENST00000295701 RLN3Q8WXF3 142 aa9.92□□□□□ -0.82
CNOT9-202ENST00000295701 HPDLQ96IR7 371 aa9.92□□□□□ -0.82
CNOT9-202ENST00000295701 ANKRD36BP1Q96IX9 119 aa9.92□□□□□ -0.82
CNOT9-202ENST00000295701 MRPL45Q9BRJ2 306 aaKnown RBP9.92□□□□□ -0.82
CNOT9-202ENST00000295701 EDEM2Q9BV94 578 aa9.92□□□□□ -0.82
CNOT9-202ENST00000295701 INTS13Q9NVM9 706 aa9.92□□□□□ -0.82
CNOT9-202ENST00000295701 EBF1Q9UH73 591 aa9.92□□□□□ -0.82
CNOT9-202ENST00000295701 ARHGAP26Q9UNA1 814 aa9.92□□□□□ -0.82
CNOT9-202ENST00000295701 CHD6Q8TD26 2715 aa9.91□□□□□ -0.82
CNOT9-202ENST00000295701 C1QTNF9BB2RNN3 333 aa9.91□□□□□ -0.82
CNOT9-202ENST00000295701 CLDN5O00501 218 aa9.91□□□□□ -0.82
CNOT9-202ENST00000295701 ABL1P00519 1130 aa9.91□□□□□ -0.82
CNOT9-202ENST00000295701 CYP17A1P05093 508 aa9.91□□□□□ -0.82
CNOT9-202ENST00000295701 C1QTNF9P0C862 333 aa9.91□□□□□ -0.82
CNOT9-202ENST00000295701 TIMP2P16035 220 aa9.91□□□□□ -0.82
CNOT9-202ENST00000295701 STAT6P42226 847 aa9.91□□□□□ -0.82
CNOT9-202ENST00000295701 MAGEA11P43364 429 aa9.91□□□□□ -0.82
CNOT9-202ENST00000295701 SHC2P98077 582 aa9.91□□□□□ -0.82
CNOT9-202ENST00000295701 CYP27A1Q02318 531 aa9.91□□□□□ -0.82
CNOT9-202ENST00000295701 NR1H3Q13133 447 aa9.91□□□□□ -0.82
CNOT9-202ENST00000295701 KCNB1Q14721 858 aa9.91□□□□□ -0.82
CNOT9-202ENST00000295701 MDH1BQ5I0G3 518 aa9.91□□□□□ -0.82
CNOT9-202ENST00000295701 PMS2CLQ68D20 193 aa9.91□□□□□ -0.82
CNOT9-202ENST00000295701 FILIP1Q7Z7B0 1213 aa9.91□□□□□ -0.82
CNOT9-202ENST00000295701 ADGRG2Q8IZP9 1017 aa9.91□□□□□ -0.82
CNOT9-202ENST00000295701 GPD1LQ8N335 351 aa9.91□□□□□ -0.82
CNOT9-202ENST00000295701 FSIP1Q8NA03 581 aa9.91□□□□□ -0.82
CNOT9-202ENST00000295701 TSTD1Q8NFU3 115 aa9.91□□□□□ -0.82
CNOT9-202ENST00000295701 ACDQ96AP0 544 aa9.91□□□□□ -0.82
CNOT9-202ENST00000295701 ELMO3Q96BJ8 720 aa9.91□□□□□ -0.82
CNOT9-202ENST00000295701 PCED1BQ96HM7 432 aa9.91□□□□□ -0.82
CNOT9-202ENST00000295701 FUBP3Q96I24 572 aaKnown RBP eCLIP9.91□□□□□ -0.82
CNOT9-202ENST00000295701 SPATA17Q96L03 361 aa9.91□□□□□ -0.82
CNOT9-202ENST00000295701 USP28Q96RU2 1077 aa9.91□□□□□ -0.82
CNOT9-202ENST00000295701 MMS19Q96T76 1030 aa9.91□□□□□ -0.82
CNOT9-202ENST00000295701 FAM117AQ9C073 453 aa9.91□□□□□ -0.82
CNOT9-202ENST00000295701 DPEP3Q9H4B8 488 aa9.91□□□□□ -0.82
CNOT9-202ENST00000295701 OLFML3Q9NRN5 406 aa9.91□□□□□ -0.82
CNOT9-202ENST00000295701 SMPD4Q9NXE4 827 aa9.91□□□□□ -0.82
CNOT9-202ENST00000295701 CDH9Q9ULB4 789 aa9.91□□□□□ -0.82
CNOT9-202ENST00000295701 CPQQ9Y646 472 aa9.91□□□□□ -0.82
CNOT9-202ENST00000295701 WDFY3Q8IZQ1 3526 aa9.9□□□□□ -0.82
CNOT9-202ENST00000295701 LNP1A1A4G5 178 aa9.9□□□□□ -0.82
CNOT9-202ENST00000295701 ZNF840PA6NDX5 716 aa9.9□□□□□ -0.82
CNOT9-202ENST00000295701 ZNF233A6NK53 670 aa9.9□□□□□ -0.82
CNOT9-202ENST00000295701 F8VP50 259 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms