RNA–Protein interactions for RNA: ENST00000265379.10

COL6A5-201, Transcript of collagen type VI alpha 5 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL6A5, Length 9,214 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A5-201ENST00000265379 TUBA3CQ13748 450 aa8.54□□□□□ -1.04
COL6A5-201ENST00000265379 DNAL1Q4LDG9 190 aa8.54□□□□□ -1.04
COL6A5-201ENST00000265379 AP3M1Q9Y2T2 418 aa8.54□□□□□ -1.04
COL6A5-201ENST00000265379 NUP214P35658 2090 aaPredicted RBP8.54□□□□□ -1.04
COL6A5-201ENST00000265379 C3orf70A6NLC5 250 aaPredicted RBP8.54□□□□□ -1.04
COL6A5-201ENST00000265379 A8MXQ7 604 aa8.54□□□□□ -1.04
COL6A5-201ENST00000265379 GOLGA8SH3BPF8 625 aa8.54□□□□□ -1.04
COL6A5-201ENST00000265379 FOXN1O15353 648 aa8.54□□□□□ -1.04
COL6A5-201ENST00000265379 CYP1A2P05177 515 aa8.54□□□□□ -1.04
COL6A5-201ENST00000265379 FAM200BP0CF97 657 aa8.54□□□□□ -1.04
COL6A5-201ENST00000265379 PTK6Q13882 451 aa8.54□□□□□ -1.04
COL6A5-201ENST00000265379 TRIM71Q2Q1W2 868 aaKnown RBP8.54□□□□□ -1.04
COL6A5-201ENST00000265379 AGGF1Q8N302 714 aaeCLIP8.54□□□□□ -1.04
COL6A5-201ENST00000265379 RAB42Q8N4Z0 105 aa8.54□□□□□ -1.04
COL6A5-201ENST00000265379 LHX5Q9H2C1 402 aa8.54□□□□□ -1.04
COL6A5-201ENST00000265379 LSM7Q9UK45 103 aaKnown RBP8.54□□□□□ -1.04
COL6A5-201ENST00000265379 ARL2BPQ9Y2Y0 163 aa8.54□□□□□ -1.04
COL6A5-201ENST00000265379 POLD2P49005 469 aa8.54□□□□□ -1.04
COL6A5-201ENST00000265379 RENBPP51606 427 aa8.54□□□□□ -1.04
COL6A5-201ENST00000265379 DEFA1P59665 94 aa8.54□□□□□ -1.04
COL6A5-201ENST00000265379 DEFA3P59666 94 aa8.54□□□□□ -1.04
COL6A5-201ENST00000265379 KCNA1Q09470 495 aa8.54□□□□□ -1.04
COL6A5-201ENST00000265379 IZUMO3Q5VZ72 239 aa8.54□□□□□ -1.04
COL6A5-201ENST00000265379 YTHDF3Q7Z739 585 aaKnown RBP8.54□□□□□ -1.04
COL6A5-201ENST00000265379 ULK4Q96C45 1275 aa8.54□□□□□ -1.04
COL6A5-201ENST00000265379 FSD1LQ9BXM9 530 aa8.54□□□□□ -1.04
COL6A5-201ENST00000265379 GPBP1L1Q9HC44 474 aaPredicted RBP8.54□□□□□ -1.04
COL6A5-201ENST00000265379 STOML1Q9UBI4 398 aa8.54□□□□□ -1.04
COL6A5-201ENST00000265379 MAGED2Q9UNF1 606 aaPredicted RBP8.54□□□□□ -1.04
COL6A5-201ENST00000265379 RRP15Q9Y3B9 282 aaKnown RBP8.54□□□□□ -1.04
COL6A5-201ENST00000265379 APC2O95996 2303 aa8.54□□□□□ -1.04
COL6A5-201ENST00000265379 FAM86B1E9PN63 330 aa8.54□□□□□ -1.04
COL6A5-201ENST00000265379 AKAP3O75969 853 aa8.54□□□□□ -1.04
COL6A5-201ENST00000265379 FAM86B2P0C5J1 330 aa8.54□□□□□ -1.04
COL6A5-201ENST00000265379 MYBP10242 640 aa8.54□□□□□ -1.04
COL6A5-201ENST00000265379 CACNB1Q02641 598 aaPredicted RBP8.54□□□□□ -1.04
COL6A5-201ENST00000265379 PTPN11Q06124 597 aaPredicted RBP8.54□□□□□ -1.04
COL6A5-201ENST00000265379 FAM110CQ1W6H9 321 aa8.54□□□□□ -1.04
COL6A5-201ENST00000265379 DENND6AQ8IWF6 608 aa8.54□□□□□ -1.04
COL6A5-201ENST00000265379 FAF2Q96CS3 445 aa8.54□□□□□ -1.04
COL6A5-201ENST00000265379 TUBA8Q9NY65 449 aaPredicted RBP8.54□□□□□ -1.04
COL6A5-201ENST00000265379 AAR2Q9Y312 384 aaKnown RBP8.54□□□□□ -1.04
COL6A5-201ENST00000265379 H3BQF6 201 aa8.54□□□□□ -1.04
COL6A5-201ENST00000265379 PIGRP01833 764 aa8.54□□□□□ -1.04
COL6A5-201ENST00000265379 ITGA4P13612 1032 aa8.54□□□□□ -1.04
COL6A5-201ENST00000265379 FAPQ12884 760 aa8.54□□□□□ -1.04
COL6A5-201ENST00000265379 NUGGCQ68CJ6 796 aa8.54□□□□□ -1.04
COL6A5-201ENST00000265379 USP49Q70CQ1 688 aa8.54□□□□□ -1.04
COL6A5-201ENST00000265379 ANKRD13CQ8N6S4 541 aa8.54□□□□□ -1.04
COL6A5-201ENST00000265379 PHC3Q8NDX5 983 aa8.54□□□□□ -1.04
COL6A5-201ENST00000265379 ZBED2Q9BTP6 218 aa8.54□□□□□ -1.04
COL6A5-201ENST00000265379 ARHGEF17Q96PE2 2063 aaPredicted RBP8.53□□□□□ -1.04
COL6A5-201ENST00000265379 H0Y626 953 aa8.53□□□□□ -1.04
COL6A5-201ENST00000265379 GYG2O15488 501 aa8.53□□□□□ -1.04
COL6A5-201ENST00000265379 ZSCAN9O15535 394 aaPredicted RBP8.53□□□□□ -1.04
COL6A5-201ENST00000265379 TRIM16O95361 564 aa8.53□□□□□ -1.04
COL6A5-201ENST00000265379 COL6A1P12109 1028 aa8.53□□□□□ -1.04
COL6A5-201ENST00000265379 C3orf67Q6ZVT6 689 aa8.53□□□□□ -1.04
COL6A5-201ENST00000265379 VPS37AQ8NEZ2 397 aa8.53□□□□□ -1.04
COL6A5-201ENST00000265379 ZNF398Q8TD17 642 aa8.53□□□□□ -1.04
COL6A5-201ENST00000265379 RAD21L1Q9H4I0 556 aa8.53□□□□□ -1.04
COL6A5-201ENST00000265379 STN1Q9H668 368 aaKnown RBP8.53□□□□□ -1.04
COL6A5-201ENST00000265379 NOP53Q9NZM5 478 aaKnown RBP8.53□□□□□ -1.04
COL6A5-201ENST00000265379 MIA3Q5JRA6 1907 aa8.53□□□□□ -1.04
COL6A5-201ENST00000265379 RGS20O76081 388 aa8.53□□□□□ -1.04
COL6A5-201ENST00000265379 NNMTP40261 264 aa8.53□□□□□ -1.04
COL6A5-201ENST00000265379 DYNLT1P63172 113 aa8.53□□□□□ -1.04
COL6A5-201ENST00000265379 PREPLQ4J6C6 727 aaPredicted RBP8.53□□□□□ -1.04
COL6A5-201ENST00000265379 TBK1Q9UHD2 729 aa8.53□□□□□ -1.04
COL6A5-201ENST00000265379 FARP1Q9Y4F1 1045 aaPredicted RBP8.53□□□□□ -1.04
COL6A5-201ENST00000265379 MYL3P08590 195 aa8.53□□□□□ -1.04
COL6A5-201ENST00000265379 SPRP35270 261 aaPredicted RBP8.53□□□□□ -1.04
COL6A5-201ENST00000265379 C16orf72Q14CZ0 275 aa8.53□□□□□ -1.04
COL6A5-201ENST00000265379 ZC3H3Q8IXZ2 948 aaKnown RBP8.53□□□□□ -1.04
COL6A5-201ENST00000265379 PPHLN1Q8NEY8 458 aaKnown RBP8.53□□□□□ -1.04
COL6A5-201ENST00000265379 MTG1Q9BT17 334 aaPredicted RBP8.53□□□□□ -1.04
COL6A5-201ENST00000265379 DDX4Q9NQI0 724 aaKnown RBP8.53□□□□□ -1.04
COL6A5-201ENST00000265379 RAD18Q9NS91 495 aa8.53□□□□□ -1.04
COL6A5-201ENST00000265379 CYP39A1Q9NYL5 469 aa8.53□□□□□ -1.04
COL6A5-201ENST00000265379 KLHL8Q9P2G9 620 aaPredicted RBP8.53□□□□□ -1.04
COL6A5-201ENST00000265379 MTO1Q9Y2Z2 717 aaKnown RBP8.53□□□□□ -1.04
COL6A5-201ENST00000265379 STK25O00506 426 aa8.53□□□□□ -1.04
COL6A5-201ENST00000265379 RTN3O95197 1032 aaPredicted RBP8.53□□□□□ -1.04
COL6A5-201ENST00000265379 CDH6P55285 790 aa8.53□□□□□ -1.04
COL6A5-201ENST00000265379 AP2B1P63010 937 aa8.53□□□□□ -1.04
COL6A5-201ENST00000265379 KRT17Q04695 432 aa8.53□□□□□ -1.04
COL6A5-201ENST00000265379 KRT72Q14CN4 511 aa8.53□□□□□ -1.04
COL6A5-201ENST00000265379 KCTD10Q9H3F6 313 aa8.53□□□□□ -1.04
COL6A5-201ENST00000265379 LY75O60449 1722 aa8.53□□□□□ -1.04
COL6A5-201ENST00000265379 RASSF10A6NK89 507 aa8.53□□□□□ -1.04
COL6A5-201ENST00000265379 AXIN1O15169 862 aa8.53□□□□□ -1.04
COL6A5-201ENST00000265379 S100A1P23297 94 aa8.53□□□□□ -1.04
COL6A5-201ENST00000265379 EFTUD2Q15029 972 aaKnown RBP eCLIP8.53□□□□□ -1.04
COL6A5-201ENST00000265379 HABP4Q5JVS0 413 aaKnown RBP8.53□□□□□ -1.04
COL6A5-201ENST00000265379 BTBD8Q5XKL5 378 aa8.53□□□□□ -1.04
COL6A5-201ENST00000265379 ANKS3Q6ZW76 656 aa8.53□□□□□ -1.04
COL6A5-201ENST00000265379 IFT43Q96FT9 208 aa8.53□□□□□ -1.04
COL6A5-201ENST00000265379 AGBL1Q96MI9 1066 aa8.53□□□□□ -1.04
COL6A5-201ENST00000265379 RBM15Q96T37 977 aaKnown RBP eCLIP8.53□□□□□ -1.04
COL6A5-201ENST00000265379 ELOVL4Q9GZR5 314 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms